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TRANSCRIPT CARD

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  1. Clone 'ma166j17' > 
  2. Transcript 'KH2012:KH.C4.515.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.A.SL16-1

Possible name(s)

SLIT2; SLIT3

Gene model

KH2012:KH.C4.515

Location

KhC4 [2,464,879 / 2,468,309]

Sequences

Amino acid sequence

Length: 473

>KH.C4.515.v1.A.SL16-1
VEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVECPPEYKCVGNMCVSQFSVA
APISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCNIPPPTLLCESNTITIMIPE
RFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGYYTISIPMPFSACQTSYTRE
MDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTSLRPAVDPIRNELSGVIQQQ
ATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQPPQNTVVYVKQLYLSCQAS
AGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFKSCTSFYIHGELSAADPATL
QRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSSVILIGPIYVIEGEVGLGSS
DTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCVAIITFIYECHKT

Nucleotide sequence

Length: 1,459

>KH2012:KH.C4.515.v1.A.SL16-1
ACGTAGAGTATTACAGTTTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTCGAT
ATGTTTTGCTTGTGTGCTTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCGGAG
TCGAGTGTCCTCCAGAATATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTGTTG
CCGCTCCTATTTCGGTGTGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCGCTT
CGAACAAACATGCAGAAGGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAACAT
GCAACATACCACCGCCAACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTCCGG
AACGGTTTGTGAGGGAATATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGACCGA
GTTATGATCAGGCAGTCGTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGAATG
GATATTATACAATATCTATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAAGAG
AGATGGATTCCAATGTATTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTTTCG
ATATCCCGATTCCAGCAATAACATGGATCTGTACTTACAACGATCAATATTCTATCGTGA
CAAGCTTGCGACCGGCGGTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGCAAC
AAGCAACAGTCGAGCTGTGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTCTCT
TCACAGTGAATGATGGAGCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGTCAG
TGCAACCACCTCAGAACACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAGCAA
GCGCAGGATCTAATGACATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTTCTA
CGTCGATCAATCTTAACGGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTCGGT
TCAAATCATGCACAAGCTTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCACAC
TTCAGCGATGTTCACTAGGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGTCTG
CTTATCTCGGAGGATCCAGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAGATT
CGAGTGTTATCCTTATCGGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTTCTT
CCGACACGTTTCCAAATTCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATTATG
ATATCAGCGGAATCACGATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTACTTT
GTGTTGCGATAATAACGTTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAACGA
TGGTGAAATGTTCGCCAGT

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[62-101] 9.767
ProSiteProfiles
ZP_dom (IPR001507) - T[108-370] 11.581
Pfam
ZP_dom (IPR001507) - T[109-363] 4.1E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value