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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C4.515.v1....'
  2. Transcript 'Moocul.CG.ELv1_2.S97...'
  3. Transcript 'Moocci.CG.ELv1_2.S50...'
  4. Transcript 'KH2012:KH.C4.515.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.515.v1.R.ND1-1

Possible name(s)

SLIT2; SLIT3

Location

KhC4 [2,464,879 / 2,468,352]

Sequences

Amino acid sequence

Length: 488

>KH.C4.515.v1.R.ND1-1
ICSVKTTVNCDCFKDVEYYSFVRIHRDSCRRMFRYVLLVCLLVKLSRAEKCFFGVECPPE
YKCVGNMCVSQFSVAAPISVCSTNPCQGDCSCIASNKHAEGFFCSSAAGYIGKTCNIPPP
TLLCESNTITIMIPERFVREYDSTLSRSYLYMGPSYDQAVVNPNSACAVRAPVNGYYTIS
IPMPFSACQTSYTREMDSNVFTNQLWLNQQGALFDIPIPAITWICTYNDQYSIVTSLRPA
VDPIRNELSGVIQQQATVELCKVGGACPNACPPLFTVNDGALYTVAEIIHVTLSVQPPQN
TVVYVKQLYLSCQASAGSNDISLVTNGCSANVLSTSINLNGMGNTVCLSFRVPRFKSCTS
FYIHGELSAADPATLQRCSLGNGYVRSAVTGNSSAYLGGSRKKRMLVKRSSEEDSSVILI
GPIYVIEGEVGLGSSDTFPNSSVVTVLLDNEDHYDISGITMATVVIGGFAFILLCVAIIT
FIYECHKT

Nucleotide sequence

Length: 1,502

>KH2012:KH.C4.515.v1.R.ND1-1
ATCTGTTCAGTTAAAACTACAGTAAATTGTGATTGTTTTAAAGACGTAGAGTATTACAGT
TTCGTCCGAATACACCGAGACAGCTGTAGAAGAATGTTTCGATATGTTTTGCTTGTGTGC
TTGCTGGTGAAGCTTTCTCGAGCGGAGAAATGCTTTTTCGGAGTCGAGTGTCCTCCAGAA
TATAAATGTGTCGGCAACATGTGCGTGAGCCAGTTTTCTGTTGCCGCTCCTATTTCGGTG
TGTAGTACCAACCCATGCCAGGGAGACTGTTCGTGTATCGCTTCGAACAAACATGCAGAA
GGTTTCTTTTGCTCGAGTGCGGCTGGTTACATTGGCAAAACATGCAACATACCACCGCCA
ACGCTACTTTGCGAAAGCAACACTATAACAATTATGATTCCGGAACGGTTTGTGAGGGAA
TATGACTCCACTCTTTCGAGAAGTTACTTATACATGGGACCGAGTTATGATCAGGCAGTC
GTCAATCCCAATTCCGCATGTGCAGTAAGAGCGCCGGTGAATGGATATTATACAATATCT
ATCCCAATGCCATTCTCCGCTTGTCAGACCAGTTACACAAGAGAGATGGATTCCAATGTA
TTCACCAACCAGCTTTGGCTCAACCAACAAGGAGCTCTTTTCGATATCCCGATTCCAGCA
ATAACATGGATCTGTACTTACAACGATCAATATTCTATCGTGACAAGCTTGCGACCGGCG
GTCGACCCGATTCGCAATGAGTTATCAGGGGTCATTCAGCAACAAGCAACAGTCGAGCTG
TGTAAGGTGGGCGGTGCTTGCCCGAACGCTTGTCCGCCTCTCTTCACAGTGAATGATGGA
GCATTGTACACGGTTGCCGAGATTATACACGTCACTTTGTCAGTGCAACCACCTCAGAAC
ACGGTTGTGTATGTCAAACAGCTTTACCTTTCGTGCCAAGCAAGCGCAGGATCTAATGAC
ATCTCACTCGTTACAAACGGCTGCAGTGCGAACGTGCTTTCTACGTCGATCAATCTTAAC
GGAATGGGCAATACTGTTTGTTTATCTTTCCGAGTACCTCGGTTCAAATCATGCACAAGC
TTTTACATCCATGGAGAACTTTCCGCAGCTGATCCAGCCACACTTCAGCGATGTTCACTA
GGAAATGGATATGTAAGATCTGCAGTAACCGGTAATTCGTCTGCTTATCTCGGAGGATCC
AGGAAGAAGAGAATGCTTGTTAAACGCTCCAGCGAAGAAGATTCGAGTGTTATCCTTATC
GGACCGATTTATGTCATTGAGGGAGAAGTAGGACTCGGTTCTTCCGACACGTTTCCAAAT
TCCTCAGTTGTGACAGTTCTTCTCGATAACGAAGACCATTATGATATCAGCGGAATCACG
ATGGCCACTGTGGTCATTGGAGGATTTGCTTTCATATTACTTTGTGTTGCGATAATAACG
TTTATTTATGAATGTCATAAAACGTGAAACAAAATAAAAACGATGGTGAAATGTTCGCCA
GT

InterProScan

ProSiteProfiles
EGF-like_dom (IPR000742) - T[77-116] 9.767
ProSiteProfiles
ZP_dom (IPR001507) - T[123-385] 11.581
Pfam
ZP_dom (IPR001507) - T[124-378] 4.5E-14

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value