Aniseed - Transcript Card

Region 'REG00001242' >
Transcript 'Boleac.CG.SB_v3.S72....' >
Transcript 'KH2012:KH.C4.531.v2....'

Transcript Model

Transcript Id

KH2012:KH.C4.531.v2.A.nonSL18-1

Possible name(s)

TIMM10; TIMM13; TIMM9

Gene model

KH2012:KH.C4.531

Location

KhC4 [1,174,542 / 1,176,552]

Sequences

Amino acid sequence

Length: 99

>KH.C4.531.v2.A.nonSL18-1
KLKMDPQEAQKLAAELEVEMMADMYNRMTSSCHKKCISTRYDTGDLEKGEAVCIDRCVAK
YLDIHEQIGKKLTEMSQTDEEAMSKMSQKPGIPANVLQR

Nucleotide sequence

Length: 1,393

>KH2012:KH.C4.531.v2.A.nonSL18-1
GACAACTTTTTCTGCAATTTTGCATTACTGTTGGTTGGTATACGGATTCTATATTCTATA
TAAACGGTATTTGTTTGAAAATTAAAGATGGATCCACAAGAAGCACAGAAGTTGGCTGCC
GAGCTCGAGGTAGAAATGATGGCAGACATGTACAACAGGATGACAAGCAGTTGTCATAAA
AAGTGTATCAGCACAAGGTATGACACTGGGGATTTGGAAAAGGGGGAAGCTGTTTGTATA
GATCGATGTGTAGCTAAATATTTGGACATCCATGAACAAATTGGGAAAAAGTTGACCGAA
ATGTCTCAAACTGATGAAGAAGCAATGAGCAAAATGTCACAAAAACCTGGTATTCCTGCA
AATGTTTTGCAAAGATGAAACATATATTAAGCTTTCAGTTTATGTAAACTTGCAAAAAAT
ACTTCTGTTTTGTTGCAAAAAATCCAAAAAACACTTCTGCAACAACCATAATGCTAATTG
CCATTTTATTAAGAAGATAAAACACATTGGAAATTTACTGCTCGTCTACAAAATAGTTTT
TGAATAAAGTTTGTTTTCAGTACAAACTTACTTAAATATAAATTTACAGATGTTTAGTTT
TGATATCAAAACATTCTAGACTAGAAAGAACCAAAATATTCTACTTCTATAAAGTAATTT
AGAAAATACATTGGCAAAGTTTACGGTAGTTTGGTATCACGAAACTGTAAGAATAAAGAA
TGTAATATTGCAGTATATTATGCTAATGAGGTTTTTTGCAACAATGATAAAAGTAGCTAT
TTGTTATCAACTACTTTAAATTTAAAAAAAACCTTTTCATTATAAATTTGACCCTAAAAT
GGTCCAATTAAACAAATTTTGATTCTATTTAATATTTGCTACAGACCGGCGGAGTTTAAA
AAGAAACGTTATAAAAACACAATTTGTCTTAATAAAGTTTGTTGTTGCTACTATAGTTAG
TCAGTTGGTATGCATCAAATGGTTGTCATGGCAAGGGCATGTGACCGAGGTAGTCCCAAT
AAGTTGTCCCAATATTTATTTCTTTGAACTCATTCCATCCAACACATAATCCTGCATTCC
AAACATAGTAGAATATGCAAGGTAAATCAATTTGAGCCATAGTAGCTTATTTGTATTGCA
CTGTGGACACATTTTATGGTGCAATCACAATCACGCCCCCCAAAAAGTTTTTTTTCTAAA
AAGTGATTAAATTTTCAAAAGTGCAAACTATTAAAACGCCTAATTAAAGGTATAAATTGG
TTTCACACAAAAAAACCTGTCACGCACTGTTTGTATTTTAATATTAGTTGGTTCAGTTTC
AGGATAAACGTAACACAGTTATGTTATTGCTGCATACAAAACTTCTACCGCCTTTGTTTA
GTTCTGAACTATG

InterProScan

Gene3D	Tim10-like_dom_sf (IPR035427) - T[4-93] 2.4E-36
PANTHER	Tim10/12 (IPR037376) - T[6-88] 6.0E-35
PANTHER	Tim10 (IPR027100) - T[6-88] 6.0E-35
Pfam	Tim10-like (IPR004217) - T[11-73] 2.6E-22
SUPERFAMILY	Tim10-like_dom_sf (IPR035427) - T[17-81] 1.31E-19

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TIM10_HUMAN	67.033 %	130	2.35E-41