Aniseed - Transcript Card

Transcript 'KH2012:KH.L9.44.v1.A...' >
Transcript 'KH2012:KH.C2.150.v4....' >
Transcript 'Moocci.CG.ELv1_2.S59...' >
Molecular Tool 'Pax2/5/8-A-MO (Imai 2009)' >
Transcript 'KH2012:KH.C4.531.v2....'

Transcript Model

Transcript Id

KH2012:KH.C4.531.v2.A.nonSL28-1

Possible name(s)

TIMM10; TIMM13; TIMM9

Gene model

KH2012:KH.C4.531

Location

KhC4 [1,174,542 / 1,176,537]

Sequences

Amino acid sequence

Length: 99

>KH.C4.531.v2.A.nonSL28-1
KLKMDPQEAQKLAAELEVEMMADMYNRMTSSCHKKCISTRYDTGDLEKGEAVCIDRCVAK
YLDIHEQIGKKLTEMSQTDEEAMSKMSQKPGIPANVLQR

Nucleotide sequence

Length: 1,378

>KH2012:KH.C4.531.v2.A.nonSL28-1
AATTTTGCATTACTGTTGGTTGGTATACGGATTCTATATTCTATATAAACGGTATTTGTT
TGAAAATTAAAGATGGATCCACAAGAAGCACAGAAGTTGGCTGCCGAGCTCGAGGTAGAA
ATGATGGCAGACATGTACAACAGGATGACAAGCAGTTGTCATAAAAAGTGTATCAGCACA
AGGTATGACACTGGGGATTTGGAAAAGGGGGAAGCTGTTTGTATAGATCGATGTGTAGCT
AAATATTTGGACATCCATGAACAAATTGGGAAAAAGTTGACCGAAATGTCTCAAACTGAT
GAAGAAGCAATGAGCAAAATGTCACAAAAACCTGGTATTCCTGCAAATGTTTTGCAAAGA
TGAAACATATATTAAGCTTTCAGTTTATGTAAACTTGCAAAAAATACTTCTGTTTTGTTG
CAAAAAATCCAAAAAACACTTCTGCAACAACCATAATGCTAATTGCCATTTTATTAAGAA
GATAAAACACATTGGAAATTTACTGCTCGTCTACAAAATAGTTTTTGAATAAAGTTTGTT
TTCAGTACAAACTTACTTAAATATAAATTTACAGATGTTTAGTTTTGATATCAAAACATT
CTAGACTAGAAAGAACCAAAATATTCTACTTCTATAAAGTAATTTAGAAAATACATTGGC
AAAGTTTACGGTAGTTTGGTATCACGAAACTGTAAGAATAAAGAATGTAATATTGCAGTA
TATTATGCTAATGAGGTTTTTTGCAACAATGATAAAAGTAGCTATTTGTTATCAACTACT
TTAAATTTAAAAAAAACCTTTTCATTATAAATTTGACCCTAAAATGGTCCAATTAAACAA
ATTTTGATTCTATTTAATATTTGCTACAGACCGGCGGAGTTTAAAAAGAAACGTTATAAA
AACACAATTTGTCTTAATAAAGTTTGTTGTTGCTACTATAGTTAGTCAGTTGGTATGCAT
CAAATGGTTGTCATGGCAAGGGCATGTGACCGAGGTAGTCCCAATAAGTTGTCCCAATAT
TTATTTCTTTGAACTCATTCCATCCAACACATAATCCTGCATTCCAAACATAGTAGAATA
TGCAAGGTAAATCAATTTGAGCCATAGTAGCTTATTTGTATTGCACTGTGGACACATTTT
ATGGTGCAATCACAATCACGCCCCCCAAAAAGTTTTTTTTCTAAAAAGTGATTAAATTTT
CAAAAGTGCAAACTATTAAAACGCCTAATTAAAGGTATAAATTGGTTTCACACAAAAAAA
CCTGTCACGCACTGTTTGTATTTTAATATTAGTTGGTTCAGTTTCAGGATAAACGTAACA
CAGTTATGTTATTGCTGCATACAAAACTTCTACCGCCTTTGTTTAGTTCTGAACTATG

InterProScan

Gene3D	Tim10-like_dom_sf (IPR035427) - T[4-93] 2.4E-36
PANTHER	Tim10/12 (IPR037376) - T[6-88] 6.0E-35
PANTHER	Tim10 (IPR027100) - T[6-88] 6.0E-35
Pfam	Tim10-like (IPR004217) - T[11-73] 2.6E-22
SUPERFAMILY	Tim10-like_dom_sf (IPR035427) - T[17-81] 1.31E-19

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TIM10_HUMAN	67.033 %	130	2.35E-41