- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.nonSL11-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,611 / 2,670,841]
Amino acid sequence
Length: 219
>KH.C4.584.v1.A.nonSL11-1
IKNARTQIELKMQCLLFIVLFALGVHTTYGVELTYELEDNSKQCFFQDITKDTRATMEYQ
VISGGRYDVDCTIEDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTITHKVIYF
SMIVGDEKPLVDTMDRATALNQMETSCVTIHEGMKNVIASQTHFRLRESLGRVFAEGINT
RVQIWSAIQVTIMIIVMVGQVFVLRGLFNTKKPFTRTDT
Nucleotide sequence
Length: 1,278
>KH2012:KH.C4.584.v1.A.nonSL11-1
AATTAAGAATGCTCGTACACAGATAGAGTTGAAAATGCAGTGTTTACTATTTATTGTCTT
ATTTGCTCTTGGTGTACACACTACTTATGGCGTGGAGCTTACTTACGAACTCGAAGACAA
TTCGAAACAATGTTTCTTTCAGGACATAACCAAAGACACTAGAGCAACGATGGAGTACCA
GGTTATAAGTGGTGGGAGGTACGATGTGGATTGCACCATTGAAGACCCTGATGGTTTGAA
GTTATATTCGGAGAAACGAAAACAATATGATTCTTACGCGTGGGATGCACAGAAGACTGG
TGCATACCAGATTTGCTTCAGCAACGAGTTTTCAACCATCACCCACAAAGTAATTTACTT
TTCCATGATAGTTGGTGATGAGAAACCACTTGTTGATACCATGGACAGAGCAACTGCATT
AAACCAGATGGAGACATCGTGTGTTACAATACACGAAGGGATGAAGAACGTAATTGCCTC
GCAAACTCATTTCCGATTACGTGAATCTCTTGGTCGAGTATTCGCCGAAGGAATTAACAC
AAGGGTGCAGATTTGGTCTGCAATTCAAGTCACCATCATGATCATTGTAATGGTTGGCCA
AGTATTTGTGTTAAGAGGACTCTTTAATACCAAGAAACCATTCACAAGAACAGACACATA
GCATTGCCCTGCACACTAATAAAGCTAGATATAAATTGTAGCAACACATAATGGTGAAGC
ATCACAAGTGTTAGACCATAAACTATTTTAAATTTTCCACACATCTCAATTCTGTTTATT
TTTATTGCAAATTCCCTGTAAAATCTTGAAAACGTAACTAGAAATGTGTTTTACTTTATT
CCCGGTTGTTTATTCTATTTATTTCCACTTTTGTTGTGCCTATTATAGTCGTAGCTAGGG
GTGTTATGAAATATAGGTACCCTGTTTGTCACACTTTACTGAAAAGTTTTATTCCCACCA
TATATTACCCAGAGTTAGTTTGACAAAAGATTTTGTGTCTCTAACATTCACAAGCACTTT
GGCACCTACCGACAAAGTTTTTAACATTTTTTGTGGAGAATCATGAAGCAAGTTGAATGT
TGAAAAGGTTGCAATTTTATGTTGTAATAAAAATGAGTCCTGTGTTATCTAGACGCTTAC
AATCATATTTTTGACAAAAAAATTCTAAACTTTTTCGGTTTTGAAAAGTATTTCAGTTTT
GAAAAGGGATTTTCTGTTCTGATAAGTAAGTAAAATGTTTGTGTTTGTTCATTAAATACT
AAACAGATGGTCGTTTTA
| PANTHER |
TMED7 (IPR015718) - T[13-212] 1.8E-76 |
| PANTHER |
TMP21-related (IPR015720) - T[13-212] 1.8E-76 |
| SMART |
GOLD_dom (IPR009038) - T[32-209] 2.4E-57 |
| Pfam |
GOLD_dom (IPR009038) - T[33-208] 8.4E-42 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[41-129] 5.23E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[42-124] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 105 | 3.74E-28 |
| TMED7_HUMAN | 55.249 % | 230 | 5.39E-77 |
| TMED3_HUMAN | 51.064 % | 219 | 1.9E-72 |