- Transcript 'KH2012:KH.C10.558.v1...' >
- Transcript 'KH2012:KH.L116.27.v2...' >
- Transcript 'KH2012:KH.C4.24.v1.A...' >
- Transcript 'KH2012:KH.C7.190.v1....' >
- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.nonSL12-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,711 / 2,670,841]
Amino acid sequence
Length: 186
>KH.C4.584.v1.A.nonSL12-1
TYELEDNSKQCFFQDITKDTRATMEYQVISGGRYDVDCTIEDPDGLKLYSEKRKQYDSYA
WDAQKTGAYQICFSNEFSTITHKVIYFSMIVGDEKPLVDTMDRATALNQMETSCVTIHEG
MKNVIASQTHFRLRESLGRVFAEGINTRVQIWSAIQVTIMIIVMVGQVFVLRGLFNTKKP
FTRTDT
Nucleotide sequence
Length: 1,178
>KH2012:KH.C4.584.v1.A.nonSL12-1
ACTTACGAACTCGAAGACAATTCGAAACAATGTTTCTTTCAGGACATAACCAAAGACACT
AGAGCAACGATGGAGTACCAGGTTATAAGTGGTGGGAGGTACGATGTGGATTGCACCATT
GAAGACCCTGATGGTTTGAAGTTATATTCGGAGAAACGAAAACAATATGATTCTTACGCG
TGGGATGCACAGAAGACTGGTGCATACCAGATTTGCTTCAGCAACGAGTTTTCAACCATC
ACCCACAAAGTAATTTACTTTTCCATGATAGTTGGTGATGAGAAACCACTTGTTGATACC
ATGGACAGAGCAACTGCATTAAACCAGATGGAGACATCGTGTGTTACAATACACGAAGGG
ATGAAGAACGTAATTGCCTCGCAAACTCATTTCCGATTACGTGAATCTCTTGGTCGAGTA
TTCGCCGAAGGAATTAACACAAGGGTGCAGATTTGGTCTGCAATTCAAGTCACCATCATG
ATCATTGTAATGGTTGGCCAAGTATTTGTGTTAAGAGGACTCTTTAATACCAAGAAACCA
TTCACAAGAACAGACACATAGCATTGCCCTGCACACTAATAAAGCTAGATATAAATTGTA
GCAACACATAATGGTGAAGCATCACAAGTGTTAGACCATAAACTATTTTAAATTTTCCAC
ACATCTCAATTCTGTTTATTTTTATTGCAAATTCCCTGTAAAATCTTGAAAACGTAACTA
GAAATGTGTTTTACTTTATTCCCGGTTGTTTATTCTATTTATTTCCACTTTTGTTGTGCC
TATTATAGTCGTAGCTAGGGGTGTTATGAAATATAGGTACCCTGTTTGTCACACTTTACT
GAAAAGTTTTATTCCCACCATATATTACCCAGAGTTAGTTTGACAAAAGATTTTGTGTCT
CTAACATTCACAAGCACTTTGGCACCTACCGACAAAGTTTTTAACATTTTTTGTGGAGAA
TCATGAAGCAAGTTGAATGTTGAAAAGGTTGCAATTTTATGTTGTAATAAAAATGAGTCC
TGTGTTATCTAGACGCTTACAATCATATTTTTGACAAAAAAATTCTAAACTTTTTCGGTT
TTGAAAAGTATTTCAGTTTTGAAAAGGGATTTTCTGTTCTGATAAGTAAGTAAAATGTTT
GTGTTTGTTCATTAAATACTAAACAGATGGTCGTTTTA
| SMART |
GOLD_dom (IPR009038) - T[1-176] 1.2E-53 |
| PANTHER |
TMP21-related (IPR015720) - T[1-179] 1.3E-73 |
| PANTHER |
TMED7 (IPR015718) - T[1-179] 1.3E-73 |
| Pfam |
GOLD_dom (IPR009038) - T[2-175] 2.3E-41 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[8-96] 3.53E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[9-91] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 104 | 1.87E-28 |
| TMED7_HUMAN | 55.307 % | 228 | 1.93E-76 |
| TMED3_HUMAN | 50.543 % | 212 | 2.81E-70 |