- Transcript 'Harore.CG.MTP2014.S2...' >
- Clone 'cima824063' >
- Transcript 'KH2012:KH.C2.958.v1....' >
- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.nonSL3-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,594 / 2,670,841]
Amino acid sequence
Length: 225
>KH.C4.584.v1.A.nonSL3-1
ALFAGLIKNARTQIELKMQCLLFIVLFALGVHTTYGVELTYELEDNSKQCFFQDITKDTR
ATMEYQVISGGRYDVDCTIEDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTIT
HKVIYFSMIVGDEKPLVDTMDRATALNQMETSCVTIHEGMKNVIASQTHFRLRESLGRVF
AEGINTRVQIWSAIQVTIMIIVMVGQVFVLRGLFNTKKPFTRTDT
Nucleotide sequence
Length: 1,295
>KH2012:KH.C4.584.v1.A.nonSL3-1
GCGTTATTTGCAGGTTTAATTAAGAATGCTCGTACACAGATAGAGTTGAAAATGCAGTGT
TTACTATTTATTGTCTTATTTGCTCTTGGTGTACACACTACTTATGGCGTGGAGCTTACT
TACGAACTCGAAGACAATTCGAAACAATGTTTCTTTCAGGACATAACCAAAGACACTAGA
GCAACGATGGAGTACCAGGTTATAAGTGGTGGGAGGTACGATGTGGATTGCACCATTGAA
GACCCTGATGGTTTGAAGTTATATTCGGAGAAACGAAAACAATATGATTCTTACGCGTGG
GATGCACAGAAGACTGGTGCATACCAGATTTGCTTCAGCAACGAGTTTTCAACCATCACC
CACAAAGTAATTTACTTTTCCATGATAGTTGGTGATGAGAAACCACTTGTTGATACCATG
GACAGAGCAACTGCATTAAACCAGATGGAGACATCGTGTGTTACAATACACGAAGGGATG
AAGAACGTAATTGCCTCGCAAACTCATTTCCGATTACGTGAATCTCTTGGTCGAGTATTC
GCCGAAGGAATTAACACAAGGGTGCAGATTTGGTCTGCAATTCAAGTCACCATCATGATC
ATTGTAATGGTTGGCCAAGTATTTGTGTTAAGAGGACTCTTTAATACCAAGAAACCATTC
ACAAGAACAGACACATAGCATTGCCCTGCACACTAATAAAGCTAGATATAAATTGTAGCA
ACACATAATGGTGAAGCATCACAAGTGTTAGACCATAAACTATTTTAAATTTTCCACACA
TCTCAATTCTGTTTATTTTTATTGCAAATTCCCTGTAAAATCTTGAAAACGTAACTAGAA
ATGTGTTTTACTTTATTCCCGGTTGTTTATTCTATTTATTTCCACTTTTGTTGTGCCTAT
TATAGTCGTAGCTAGGGGTGTTATGAAATATAGGTACCCTGTTTGTCACACTTTACTGAA
AAGTTTTATTCCCACCATATATTACCCAGAGTTAGTTTGACAAAAGATTTTGTGTCTCTA
ACATTCACAAGCACTTTGGCACCTACCGACAAAGTTTTTAACATTTTTTGTGGAGAATCA
TGAAGCAAGTTGAATGTTGAAAAGGTTGCAATTTTATGTTGTAATAAAAATGAGTCCTGT
GTTATCTAGACGCTTACAATCATATTTTTGACAAAAAAATTCTAAACTTTTTCGGTTTTG
AAAAGTATTTCAGTTTTGAAAAGGGATTTTCTGTTCTGATAAGTAAGTAAAATGTTTGTG
TTTGTTCATTAAATACTAAACAGATGGTCGTTTTA
| PANTHER |
TMP21-related (IPR015720) - T[18-218] 1.4E-76 |
| PANTHER |
TMED7 (IPR015718) - T[18-218] 1.4E-76 |
| SMART |
GOLD_dom (IPR009038) - T[38-215] 2.4E-57 |
| Pfam |
GOLD_dom (IPR009038) - T[39-214] 9.2E-42 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[47-135] 5.62E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[48-130] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 105 | 5.23E-28 |
| TMED7_HUMAN | 55.249 % | 230 | 6.73E-77 |
| TMED3_HUMAN | 51.064 % | 219 | 2.26E-72 |