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TRANSCRIPT CARD

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  1. Clone 'cima014i21' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'KH2012:KH.C4.584.v1....'

Transcript Model

Transcript Id

KH2012:KH.C4.584.v1.A.nonSL3-1

Possible name(s)

TMED3; TMED7; TMED7-TICAM2

Gene model

KH2012:KH.C4.584

Location

KhC4 [2,667,594 / 2,670,841]

Sequences

Amino acid sequence

Length: 225

>KH.C4.584.v1.A.nonSL3-1
ALFAGLIKNARTQIELKMQCLLFIVLFALGVHTTYGVELTYELEDNSKQCFFQDITKDTR
ATMEYQVISGGRYDVDCTIEDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTIT
HKVIYFSMIVGDEKPLVDTMDRATALNQMETSCVTIHEGMKNVIASQTHFRLRESLGRVF
AEGINTRVQIWSAIQVTIMIIVMVGQVFVLRGLFNTKKPFTRTDT

Nucleotide sequence

Length: 1,295

>KH2012:KH.C4.584.v1.A.nonSL3-1
GCGTTATTTGCAGGTTTAATTAAGAATGCTCGTACACAGATAGAGTTGAAAATGCAGTGT
TTACTATTTATTGTCTTATTTGCTCTTGGTGTACACACTACTTATGGCGTGGAGCTTACT
TACGAACTCGAAGACAATTCGAAACAATGTTTCTTTCAGGACATAACCAAAGACACTAGA
GCAACGATGGAGTACCAGGTTATAAGTGGTGGGAGGTACGATGTGGATTGCACCATTGAA
GACCCTGATGGTTTGAAGTTATATTCGGAGAAACGAAAACAATATGATTCTTACGCGTGG
GATGCACAGAAGACTGGTGCATACCAGATTTGCTTCAGCAACGAGTTTTCAACCATCACC
CACAAAGTAATTTACTTTTCCATGATAGTTGGTGATGAGAAACCACTTGTTGATACCATG
GACAGAGCAACTGCATTAAACCAGATGGAGACATCGTGTGTTACAATACACGAAGGGATG
AAGAACGTAATTGCCTCGCAAACTCATTTCCGATTACGTGAATCTCTTGGTCGAGTATTC
GCCGAAGGAATTAACACAAGGGTGCAGATTTGGTCTGCAATTCAAGTCACCATCATGATC
ATTGTAATGGTTGGCCAAGTATTTGTGTTAAGAGGACTCTTTAATACCAAGAAACCATTC
ACAAGAACAGACACATAGCATTGCCCTGCACACTAATAAAGCTAGATATAAATTGTAGCA
ACACATAATGGTGAAGCATCACAAGTGTTAGACCATAAACTATTTTAAATTTTCCACACA
TCTCAATTCTGTTTATTTTTATTGCAAATTCCCTGTAAAATCTTGAAAACGTAACTAGAA
ATGTGTTTTACTTTATTCCCGGTTGTTTATTCTATTTATTTCCACTTTTGTTGTGCCTAT
TATAGTCGTAGCTAGGGGTGTTATGAAATATAGGTACCCTGTTTGTCACACTTTACTGAA
AAGTTTTATTCCCACCATATATTACCCAGAGTTAGTTTGACAAAAGATTTTGTGTCTCTA
ACATTCACAAGCACTTTGGCACCTACCGACAAAGTTTTTAACATTTTTTGTGGAGAATCA
TGAAGCAAGTTGAATGTTGAAAAGGTTGCAATTTTATGTTGTAATAAAAATGAGTCCTGT
GTTATCTAGACGCTTACAATCATATTTTTGACAAAAAAATTCTAAACTTTTTCGGTTTTG
AAAAGTATTTCAGTTTTGAAAAGGGATTTTCTGTTCTGATAAGTAAGTAAAATGTTTGTG
TTTGTTCATTAAATACTAAACAGATGGTCGTTTTA

InterProScan

PANTHER
TMP21-related (IPR015720) - T[18-218] 1.4E-76
PANTHER
TMED7 (IPR015718) - T[18-218] 1.4E-76
SMART
GOLD_dom (IPR009038) - T[38-215] 2.4E-57
Pfam
GOLD_dom (IPR009038) - T[39-214] 9.2E-42
SUPERFAMILY
GOLD_dom_sf (IPR036598) - T[47-135] 5.62E-21
ProSiteProfiles
GOLD_dom (IPR009038) - T[48-130] 18.851

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMED2_HUMAN 27.841 % 105 5.23E-28
TMED7_HUMAN 55.249 % 230 6.73E-77
TMED3_HUMAN 51.064 % 219 2.26E-72