- Transcript 'Haaura.CG.MTP2014.S2...' >
- Clone 'cien145418' >
- Transcript 'KH2012:KH.C5.61.v4.A...' >
- Transcript 'KH2012:KH.C2.141.v2....' >
- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.nonSL5-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,589 / 2,670,841]
Amino acid sequence
Length: 226
>KH.C4.584.v1.A.nonSL5-1
IALFAGLIKNARTQIELKMQCLLFIVLFALGVHTTYGVELTYELEDNSKQCFFQDITKDT
RATMEYQVISGGRYDVDCTIEDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTI
THKVIYFSMIVGDEKPLVDTMDRATALNQMETSCVTIHEGMKNVIASQTHFRLRESLGRV
FAEGINTRVQIWSAIQVTIMIIVMVGQVFVLRGLFNTKKPFTRTDT
Nucleotide sequence
Length: 1,300
>KH2012:KH.C4.584.v1.A.nonSL5-1
AAATTGCGTTATTTGCAGGTTTAATTAAGAATGCTCGTACACAGATAGAGTTGAAAATGC
AGTGTTTACTATTTATTGTCTTATTTGCTCTTGGTGTACACACTACTTATGGCGTGGAGC
TTACTTACGAACTCGAAGACAATTCGAAACAATGTTTCTTTCAGGACATAACCAAAGACA
CTAGAGCAACGATGGAGTACCAGGTTATAAGTGGTGGGAGGTACGATGTGGATTGCACCA
TTGAAGACCCTGATGGTTTGAAGTTATATTCGGAGAAACGAAAACAATATGATTCTTACG
CGTGGGATGCACAGAAGACTGGTGCATACCAGATTTGCTTCAGCAACGAGTTTTCAACCA
TCACCCACAAAGTAATTTACTTTTCCATGATAGTTGGTGATGAGAAACCACTTGTTGATA
CCATGGACAGAGCAACTGCATTAAACCAGATGGAGACATCGTGTGTTACAATACACGAAG
GGATGAAGAACGTAATTGCCTCGCAAACTCATTTCCGATTACGTGAATCTCTTGGTCGAG
TATTCGCCGAAGGAATTAACACAAGGGTGCAGATTTGGTCTGCAATTCAAGTCACCATCA
TGATCATTGTAATGGTTGGCCAAGTATTTGTGTTAAGAGGACTCTTTAATACCAAGAAAC
CATTCACAAGAACAGACACATAGCATTGCCCTGCACACTAATAAAGCTAGATATAAATTG
TAGCAACACATAATGGTGAAGCATCACAAGTGTTAGACCATAAACTATTTTAAATTTTCC
ACACATCTCAATTCTGTTTATTTTTATTGCAAATTCCCTGTAAAATCTTGAAAACGTAAC
TAGAAATGTGTTTTACTTTATTCCCGGTTGTTTATTCTATTTATTTCCACTTTTGTTGTG
CCTATTATAGTCGTAGCTAGGGGTGTTATGAAATATAGGTACCCTGTTTGTCACACTTTA
CTGAAAAGTTTTATTCCCACCATATATTACCCAGAGTTAGTTTGACAAAAGATTTTGTGT
CTCTAACATTCACAAGCACTTTGGCACCTACCGACAAAGTTTTTAACATTTTTTGTGGAG
AATCATGAAGCAAGTTGAATGTTGAAAAGGTTGCAATTTTATGTTGTAATAAAAATGAGT
CCTGTGTTATCTAGACGCTTACAATCATATTTTTGACAAAAAAATTCTAAACTTTTTCGG
TTTTGAAAAGTATTTCAGTTTTGAAAAGGGATTTTCTGTTCTGATAAGTAAGTAAAATGT
TTGTGTTTGTTCATTAAATACTAAACAGATGGTCGTTTTA
| PANTHER |
TMP21-related (IPR015720) - T[19-219] 1.3E-76 |
| PANTHER |
TMED7 (IPR015718) - T[19-219] 1.3E-76 |
| SMART |
GOLD_dom (IPR009038) - T[39-216] 2.4E-57 |
| Pfam |
GOLD_dom (IPR009038) - T[40-215] 9.3E-42 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[48-136] 5.62E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[49-131] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 105 | 5.26E-28 |
| TMED7_HUMAN | 55.249 % | 230 | 6.76E-77 |
| TMED3_HUMAN | 51.064 % | 219 | 2.1E-72 |