- Transcript 'KH2012:KH.C4.407.v1....' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Clone 'cicl030o07' >
- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.nonSL7-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,693 / 2,670,841]
Amino acid sequence
Length: 192
>KH.C4.584.v1.A.nonSL7-1
TYGVELTYELEDNSKQCFFQDITKDTRATMEYQVISGGRYDVDCTIEDPDGLKLYSEKRK
QYDSYAWDAQKTGAYQICFSNEFSTITHKVIYFSMIVGDEKPLVDTMDRATALNQMETSC
VTIHEGMKNVIASQTHFRLRESLGRVFAEGINTRVQIWSAIQVTIMIIVMVGQVFVLRGL
FNTKKPFTRTDT
Nucleotide sequence
Length: 1,196
>KH2012:KH.C4.584.v1.A.nonSL7-1
ACTTATGGCGTGGAGCTTACTTACGAACTCGAAGACAATTCGAAACAATGTTTCTTTCAG
GACATAACCAAAGACACTAGAGCAACGATGGAGTACCAGGTTATAAGTGGTGGGAGGTAC
GATGTGGATTGCACCATTGAAGACCCTGATGGTTTGAAGTTATATTCGGAGAAACGAAAA
CAATATGATTCTTACGCGTGGGATGCACAGAAGACTGGTGCATACCAGATTTGCTTCAGC
AACGAGTTTTCAACCATCACCCACAAAGTAATTTACTTTTCCATGATAGTTGGTGATGAG
AAACCACTTGTTGATACCATGGACAGAGCAACTGCATTAAACCAGATGGAGACATCGTGT
GTTACAATACACGAAGGGATGAAGAACGTAATTGCCTCGCAAACTCATTTCCGATTACGT
GAATCTCTTGGTCGAGTATTCGCCGAAGGAATTAACACAAGGGTGCAGATTTGGTCTGCA
ATTCAAGTCACCATCATGATCATTGTAATGGTTGGCCAAGTATTTGTGTTAAGAGGACTC
TTTAATACCAAGAAACCATTCACAAGAACAGACACATAGCATTGCCCTGCACACTAATAA
AGCTAGATATAAATTGTAGCAACACATAATGGTGAAGCATCACAAGTGTTAGACCATAAA
CTATTTTAAATTTTCCACACATCTCAATTCTGTTTATTTTTATTGCAAATTCCCTGTAAA
ATCTTGAAAACGTAACTAGAAATGTGTTTTACTTTATTCCCGGTTGTTTATTCTATTTAT
TTCCACTTTTGTTGTGCCTATTATAGTCGTAGCTAGGGGTGTTATGAAATATAGGTACCC
TGTTTGTCACACTTTACTGAAAAGTTTTATTCCCACCATATATTACCCAGAGTTAGTTTG
ACAAAAGATTTTGTGTCTCTAACATTCACAAGCACTTTGGCACCTACCGACAAAGTTTTT
AACATTTTTTGTGGAGAATCATGAAGCAAGTTGAATGTTGAAAAGGTTGCAATTTTATGT
TGTAATAAAAATGAGTCCTGTGTTATCTAGACGCTTACAATCATATTTTTGACAAAAAAA
TTCTAAACTTTTTCGGTTTTGAAAAGTATTTCAGTTTTGAAAAGGGATTTTCTGTTCTGA
TAAGTAAGTAAAATGTTTGTGTTTGTTCATTAAATACTAAACAGATGGTCGTTTTA
| PANTHER |
TMP21-related (IPR015720) - T[4-185] 7.8E-75 |
| PANTHER |
TMED7 (IPR015718) - T[4-185] 7.8E-75 |
| SMART |
GOLD_dom (IPR009038) - T[5-182] 2.4E-57 |
| Pfam |
GOLD_dom (IPR009038) - T[6-181] 5.2E-42 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[14-102] 3.79E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[15-97] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 104 | 2.13E-28 |
| TMED7_HUMAN | 55.249 % | 230 | 2.56E-77 |
| TMED3_HUMAN | 50.794 % | 218 | 1.14E-72 |