- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.SL1-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,607 / 2,670,841]
Amino acid sequence
Length: 220
>KH.C4.584.v1.A.SL1-1
LIKNARTQIELKMQCLLFIVLFALGVHTTYGVELTYELEDNSKQCFFQDITKDTRATMEY
QVISGGRYDVDCTIEDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTITHKVIY
FSMIVGDEKPLVDTMDRATALNQMETSCVTIHEGMKNVIASQTHFRLRESLGRVFAEGIN
TRVQIWSAIQVTIMIIVMVGQVFVLRGLFNTKKPFTRTDT
Nucleotide sequence
Length: 1,282
>KH2012:KH.C4.584.v1.A.SL1-1
GTTTAATTAAGAATGCTCGTACACAGATAGAGTTGAAAATGCAGTGTTTACTATTTATTG
TCTTATTTGCTCTTGGTGTACACACTACTTATGGCGTGGAGCTTACTTACGAACTCGAAG
ACAATTCGAAACAATGTTTCTTTCAGGACATAACCAAAGACACTAGAGCAACGATGGAGT
ACCAGGTTATAAGTGGTGGGAGGTACGATGTGGATTGCACCATTGAAGACCCTGATGGTT
TGAAGTTATATTCGGAGAAACGAAAACAATATGATTCTTACGCGTGGGATGCACAGAAGA
CTGGTGCATACCAGATTTGCTTCAGCAACGAGTTTTCAACCATCACCCACAAAGTAATTT
ACTTTTCCATGATAGTTGGTGATGAGAAACCACTTGTTGATACCATGGACAGAGCAACTG
CATTAAACCAGATGGAGACATCGTGTGTTACAATACACGAAGGGATGAAGAACGTAATTG
CCTCGCAAACTCATTTCCGATTACGTGAATCTCTTGGTCGAGTATTCGCCGAAGGAATTA
ACACAAGGGTGCAGATTTGGTCTGCAATTCAAGTCACCATCATGATCATTGTAATGGTTG
GCCAAGTATTTGTGTTAAGAGGACTCTTTAATACCAAGAAACCATTCACAAGAACAGACA
CATAGCATTGCCCTGCACACTAATAAAGCTAGATATAAATTGTAGCAACACATAATGGTG
AAGCATCACAAGTGTTAGACCATAAACTATTTTAAATTTTCCACACATCTCAATTCTGTT
TATTTTTATTGCAAATTCCCTGTAAAATCTTGAAAACGTAACTAGAAATGTGTTTTACTT
TATTCCCGGTTGTTTATTCTATTTATTTCCACTTTTGTTGTGCCTATTATAGTCGTAGCT
AGGGGTGTTATGAAATATAGGTACCCTGTTTGTCACACTTTACTGAAAAGTTTTATTCCC
ACCATATATTACCCAGAGTTAGTTTGACAAAAGATTTTGTGTCTCTAACATTCACAAGCA
CTTTGGCACCTACCGACAAAGTTTTTAACATTTTTTGTGGAGAATCATGAAGCAAGTTGA
ATGTTGAAAAGGTTGCAATTTTATGTTGTAATAAAAATGAGTCCTGTGTTATCTAGACGC
TTACAATCATATTTTTGACAAAAAAATTCTAAACTTTTTCGGTTTTGAAAAGTATTTCAG
TTTTGAAAAGGGATTTTCTGTTCTGATAAGTAAGTAAAATGTTTGTGTTTGTTCATTAAA
TACTAAACAGATGGTCGTTTTA
| PANTHER |
TMED7 (IPR015718) - T[14-213] 1.7E-76 |
| PANTHER |
TMP21-related (IPR015720) - T[14-213] 1.7E-76 |
| SMART |
GOLD_dom (IPR009038) - T[33-210] 2.4E-57 |
| Pfam |
GOLD_dom (IPR009038) - T[34-209] 8.5E-42 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[42-130] 5.36E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[43-125] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 105 | 4.23E-28 |
| TMED7_HUMAN | 55.249 % | 230 | 5.84E-77 |
| TMED3_HUMAN | 51.064 % | 219 | 1.95E-72 |