- Transcript 'KH2012:KH.L4.55.v1.A...' >
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- Transcript 'KH2012:KH.C4.584.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.584.v1.A.SL8-1
Possible name(s)
TMED3; TMED7; TMED7-TICAM2
Gene model
Location
KhC4 [2,667,637 / 2,670,841]
Amino acid sequence
Length: 210
>KH.C4.584.v1.A.SL8-1
LKMQCLLFIVLFALGVHTTYGVELTYELEDNSKQCFFQDITKDTRATMEYQVISGGRYDV
DCTIEDPDGLKLYSEKRKQYDSYAWDAQKTGAYQICFSNEFSTITHKVIYFSMIVGDEKP
LVDTMDRATALNQMETSCVTIHEGMKNVIASQTHFRLRESLGRVFAEGINTRVQIWSAIQ
VTIMIIVMVGQVFVLRGLFNTKKPFTRTDT
Nucleotide sequence
Length: 1,252
>KH2012:KH.C4.584.v1.A.SL8-1
AGTTGAAAATGCAGTGTTTACTATTTATTGTCTTATTTGCTCTTGGTGTACACACTACTT
ATGGCGTGGAGCTTACTTACGAACTCGAAGACAATTCGAAACAATGTTTCTTTCAGGACA
TAACCAAAGACACTAGAGCAACGATGGAGTACCAGGTTATAAGTGGTGGGAGGTACGATG
TGGATTGCACCATTGAAGACCCTGATGGTTTGAAGTTATATTCGGAGAAACGAAAACAAT
ATGATTCTTACGCGTGGGATGCACAGAAGACTGGTGCATACCAGATTTGCTTCAGCAACG
AGTTTTCAACCATCACCCACAAAGTAATTTACTTTTCCATGATAGTTGGTGATGAGAAAC
CACTTGTTGATACCATGGACAGAGCAACTGCATTAAACCAGATGGAGACATCGTGTGTTA
CAATACACGAAGGGATGAAGAACGTAATTGCCTCGCAAACTCATTTCCGATTACGTGAAT
CTCTTGGTCGAGTATTCGCCGAAGGAATTAACACAAGGGTGCAGATTTGGTCTGCAATTC
AAGTCACCATCATGATCATTGTAATGGTTGGCCAAGTATTTGTGTTAAGAGGACTCTTTA
ATACCAAGAAACCATTCACAAGAACAGACACATAGCATTGCCCTGCACACTAATAAAGCT
AGATATAAATTGTAGCAACACATAATGGTGAAGCATCACAAGTGTTAGACCATAAACTAT
TTTAAATTTTCCACACATCTCAATTCTGTTTATTTTTATTGCAAATTCCCTGTAAAATCT
TGAAAACGTAACTAGAAATGTGTTTTACTTTATTCCCGGTTGTTTATTCTATTTATTTCC
ACTTTTGTTGTGCCTATTATAGTCGTAGCTAGGGGTGTTATGAAATATAGGTACCCTGTT
TGTCACACTTTACTGAAAAGTTTTATTCCCACCATATATTACCCAGAGTTAGTTTGACAA
AAGATTTTGTGTCTCTAACATTCACAAGCACTTTGGCACCTACCGACAAAGTTTTTAACA
TTTTTTGTGGAGAATCATGAAGCAAGTTGAATGTTGAAAAGGTTGCAATTTTATGTTGTA
ATAAAAATGAGTCCTGTGTTATCTAGACGCTTACAATCATATTTTTGACAAAAAAATTCT
AAACTTTTTCGGTTTTGAAAAGTATTTCAGTTTTGAAAAGGGATTTTCTGTTCTGATAAG
TAAGTAAAATGTTTGTGTTTGTTCATTAAATACTAAACAGATGGTCGTTTTA
| PANTHER |
TMP21-related (IPR015720) - T[7-203] 3.3E-76 |
| PANTHER |
TMED7 (IPR015718) - T[7-203] 3.3E-76 |
| SMART |
GOLD_dom (IPR009038) - T[23-200] 2.4E-57 |
| Pfam |
GOLD_dom (IPR009038) - T[24-199] 7.2E-42 |
| SUPERFAMILY |
GOLD_dom_sf (IPR036598) - T[32-120] 4.71E-21 |
| ProSiteProfiles |
GOLD_dom (IPR009038) - T[33-115] 18.851 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TMED2_HUMAN | 27.841 % | 105 | 3.09E-28 |
| TMED7_HUMAN | 55.249 % | 230 | 5.46E-77 |
| TMED3_HUMAN | 51.064 % | 218 | 1.87E-72 |