- Transcript 'KH2012:KH.C4.795.v1....'
Transcript Model
Transcript Id
KH2012:KH.C4.795.v1.A.ND1-1
Possible name(s)
CACNA1C; CACNA1D; CACNA1S
Gene model
Location
KhC4 [2,082,266 / 2,101,747]
Amino acid sequence
Length: 2,305
>KH.C4.795.v1.A.ND1-1
MTLNSRGMGAFVPTVNHQAFFKPVNCFAGLKNDPPAPQREVPSLARPKQQDRSTLRNWRQ
ETSGDGRPALFPNQPSAAVQGRITNGHTRTTESGGADKLAQDSGVRNSDSLQAKPANGIL
ALSKASSTAQVNAPGQPVTGGVNWAEVLKAAKNQNKKMHGPRKRKQAQQDTAKAETSLLC
LSLKNPFRKACLKIVEWRPFDVLILLTIFANCCALAIYVPFPGEDSNATNEILEKVEYVF
LAIFTVESFMKIIAFGFAFHPNAYLRNGWNILDFIIVIVGLISIVFEMADVGSTDKVRAL
RAFRVLRPLRLVSGVPSLQVVLNAIIRAMLPLLHIALLVMFVIIIYAVVGLELFKGKLHK
TCYFNETGMTDVIANEDPQPCAGPNEWGRHCPDDTVCKEGWDGPANGIINFDTFYFSFIT
VFQCITMEGWTEVLYYTNDAMGSHLPWMYFVSLIIVGSFFVMNLILGVLSGEFSKEREKA
NARGEFQKLREKQQLDEDVRGYMEWITQAEDIDPVNEDDDMDEKRKCQGDNEDGSSDVTA
AQADDSWWQKQRKKLCKTCYSRRWKRWNRKTRRKCRLMVKSQTFYWLVIVLVFFNTLSLA
TEHYQQPDWLTSVQEISNKVLLGIFTLEMLLKMYALGMQVYFVSLFNRFDCFVVCGGIVE
MVLTSAKVMEPLGISVLRCVRLLRIFKVTRYWSSLSNLVASLLNSIRSIAGLLLLLFLFI
VIFSLLGMQLFGGRFNSIAEGDQKIRSNFDTFLQALLTVFQILTGEDWNVVMYYGIRAYG
GASSIGLITSIYFIILFVCGNYILLNVFLAIAVDNLADAESLNVAQKEKEEEQKRKKTMR
LKKLSVETAEGADEYGDRQKYDKNEDGIPLQNIAESSLQTDEIDHEIRIEVTEASETNSD
RHLPEDGGSDSEPEVPIGPRPRRMSELNLKETKSPMPQATSFFIFTPTNPFRKWCHFIAN
NNIFNNGIFVCIMLSSVALACEDPIDSKSELNEVLKYFDYVFTGIFTVEIILKMVAYGVI
LHKGSFCRNSFNLLDLLVVGVSLISIFGNSDGFSVVKILRVLRVLRPLRAINRAKGLKHV
VQCVIVAISTIGNIFIITTLLQFMFACIGVQLFKGRLYGCTDESKSTREECKGDFYAIPQ
DGFGQPHIKKREWVNNDFNYDNVLNAMLTLFVVATFEGWPALLYKSIDSWKEGVGPKYDA
RPAVALFYFIYIIVIAFFMMNIFVGFVIVTFQEQGEQEYRNCELDKNQRQCVEYALKAKP
TRRYIPKNPWQYKAWFVVNSTYFEYFMLVLILLNTVCLAIQHYQQDAGLTRILNHMNLVF
TTLFTIEMIFKLIAFKPRGYISDPWNIFDFLVVIGSIVDILLSKIDTHYFGDPWNTFDAI
IVFGSIADAVTTFIVETHISFSALNGTSHMNSKICSFSINFFRLFRVMRLVKLLSRGEGI
RTLLWTFIKSFQALPYVALLIVLLFFIYAVIGMQVFGKVKPIDGEQINRNNNFQTFIQSV
LLLFRCATGESWQEVMLAAASGKECDDRSDWNSTGLASPEDKFACGSDFSYTYFLTFYML
CAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKTVWSEYDPEAKGRIKHLNVVKLLR
RIQPPLGFGKLCPQRMACRKLVTMNMPLNSDGTVMFNATLFALIRTSLNIKTEGNIDQAN
EELRAVIKKIWKRTSIKLLDQIAPPAGNDDITVGKFYATYLIQDYFRKFRERKAAAKLAN
DKSKGLSGANMQNHKDAGLRALQDAGPEIKRAISGGIAHDEPYASNDENEPEHRRRHSLF
GMLRRNSATTPTASKRPLQVESDDHKKRYSGRFLTSQSPMLNRLTPKSRSIHDIVMAARA
QHSGQSGDETTSSIASPTDESLGRNDYHSRSAVTHGENSNVNNSSSNYSFSSYATDDELN
SVGGYYDEHAPLHPAARSERKYNDHQRYPSYAKRWDRSVYRCDDDSRTVLYPLLPVHSRD
EESEYETDHTTYAAAPYRCNDETCSVDFEKRSNYQAQNGAVSNRTNRSLPNVPLRTSIDR
PVALNPHDHHHHRESVNNHTNSNDSGPMHSRYTITTPKLRIMDSDYVPTIDRFVPRSRQS
KSKPHRRLLPIPPLQHARSGTIPSLHLSNQEAWRTPPSSPRQALSVRSNLNSPIGSSDEG
GWATPAQRWTSESNMDTFGRGNHINYHDSRRQSGNDLIEKVLLDGGLPVLAQDKNFVQTI
SKELADACELSLPELHSAATNIINSDHSLYGSDESLCGDVSPDNHIDDDVTSLEEGRVCF
RRRSKTRKDEHGLEDEIIVVPNITS
Nucleotide sequence
Length: 7,600
>KH2012:KH.C4.795.v1.A.ND1-1
ATGACACTTAATTCCCGTGGGATGGGTGCATTCGTGCCCACGGTTAATCATCAGGCCTTC
TTCAAGCCCGTCAATTGTTTTGCAGGACTGAAGAATGATCCGCCGGCACCACAACGTGAA
GTACCTTCGCTTGCCAGACCCAAGCAGCAAGACCGATCTACTCTTAGAAACTGGAGGCAA
GAGACGTCCGGAGACGGACGACCAGCCTTATTTCCAAATCAACCGTCAGCAGCGGTACAA
GGACGGATTACAAACGGCCACACGAGAACAACAGAGAGCGGAGGCGCGGACAAACTCGCG
CAGGACTCAGGCGTAAGGAATTCAGACTCGCTGCAGGCAAAGCCTGCGAACGGAATACTC
GCTTTATCAAAAGCGTCCAGTACTGCACAGGTCAACGCTCCCGGACAGCCGGTAACAGGA
GGAGTAAACTGGGCAGAAGTGCTAAAAGCAGCAAAGAACCAGAACAAGAAGATGCACGGA
CCACGGAAAAGAAAGCAAGCGCAACAAGACACCGCAAAGGCAGAAACTTCGCTTCTGTGT
TTGTCGCTAAAAAATCCTTTCCGAAAAGCGTGTTTGAAAATTGTGGAATGGAGGCCTTTC
GACGTTCTTATCCTTCTTACAATATTCGCCAACTGTTGTGCCCTCGCTATTTATGTCCCG
TTTCCAGGAGAGGACTCAAACGCCACGAACGAAATCCTGGAAAAGGTGGAGTACGTATTT
CTTGCCATTTTCACTGTGGAATCTTTTATGAAGATCATTGCGTTCGGATTTGCATTCCAC
CCGAACGCTTATTTACGAAATGGTTGGAATATCTTGGATTTCATCATCGTTATTGTTGGG
TTAATCAGCATAGTATTCGAGATGGCGGACGTGGGAAGCACAGACAAAGTCCGTGCTCTT
AGAGCTTTTCGAGTACTCCGGCCGCTCCGGCTCGTTTCCGGAGTACCAAGTTTGCAGGTG
GTGTTGAACGCCATTATTAGAGCAATGTTACCGCTCTTGCACATCGCCCTACTAGTTATG
TTTGTAATCATCATATACGCCGTGGTAGGACTCGAGCTTTTTAAAGGCAAACTTCACAAA
ACTTGTTACTTCAACGAAACAGGCATGACCGACGTAATAGCAAACGAGGACCCACAGCCC
TGTGCTGGCCCTAACGAGTGGGGTCGCCACTGCCCCGACGATACCGTGTGCAAGGAGGGT
TGGGATGGTCCAGCAAATGGCATCATCAACTTTGATACGTTTTATTTTTCGTTCATCACT
GTGTTTCAGTGCATTACCATGGAGGGTTGGACAGAAGTACTGTACTACACCAATGATGCA
ATGGGAAGCCATTTGCCGTGGATGTATTTTGTCTCCTTGATCATCGTTGGCTCGTTCTTC
GTTATGAACCTTATTCTTGGTGTTTTAAGCGGGGAATTCTCAAAGGAAAGGGAAAAAGCG
AACGCTCGTGGTGAGTTCCAGAAGCTTCGCGAGAAGCAGCAGCTGGATGAGGACGTGAGA
GGATACATGGAGTGGATCACACAAGCAGAGGACATCGACCCTGTCAATGAAGATGACGAC
ATGGATGAAAAACGTAAGTGCCAGGGCGACAATGAAGACGGCTCGAGTGACGTCACAGCT
GCGCAAGCCGACGACAGTTGGTGGCAAAAGCAGCGGAAGAAACTATGCAAGACTTGCTAC
AGCCGACGATGGAAGAGATGGAATCGCAAAACGAGAAGGAAGTGCCGCCTCATGGTCAAG
TCGCAGACGTTTTATTGGCTTGTAATCGTTCTTGTGTTTTTCAACACTCTCTCGTTAGCA
ACTGAACACTATCAACAGCCCGACTGGCTTACATCTGTGCAAGAAATATCAAACAAAGTT
TTACTGGGAATTTTCACGCTCGAGATGTTACTGAAGATGTACGCGCTTGGAATGCAAGTC
TACTTCGTATCTCTGTTCAACCGTTTTGACTGTTTTGTGGTCTGCGGTGGCATCGTGGAA
ATGGTCCTAACCAGTGCCAAGGTTATGGAACCGCTTGGAATATCCGTTCTGCGTTGTGTA
CGACTGTTGAGGATATTTAAAGTAACTAGATACTGGAGCTCTCTCAGTAATTTAGTCGCA
TCCCTTCTAAACTCAATCCGATCGATCGCTGGACTTCTCCTTTTGCTCTTCTTGTTCATC
GTCATCTTCTCATTGCTCGGGATGCAGCTTTTCGGCGGGAGGTTTAACTCTATTGCCGAA
GGCGACCAGAAAATCCGCTCAAACTTTGATACGTTTCTACAAGCTCTTCTTACAGTGTTT
CAGATTCTCACAGGAGAGGATTGGAACGTGGTCATGTACTATGGAATTCGAGCGTACGGC
GGCGCCAGTAGTATTGGTCTCATTACTTCTATTTATTTCATCATTTTATTTGTGTGTGGA
AACTATATTCTACTAAACGTCTTCTTGGCTATTGCTGTTGATAACTTGGCAGACGCTGAA
AGCTTGAATGTCGCGCAAAAAGAGAAGGAGGAAGAACAAAAAAGAAAGAAGACCATGCGC
CTTAAGAAGCTCAGCGTAGAGACGGCTGAGGGTGCTGACGAATACGGTGATCGACAGAAG
TATGATAAGAACGAAGATGGCATCCCTCTTCAAAATATCGCGGAATCCTCGCTGCAAACG
GATGAAATAGATCACGAGATCAGAATTGAAGTGACGGAAGCCTCCGAAACCAACTCCGAT
CGCCACCTACCGGAAGACGGAGGAAGTGATTCAGAACCGGAAGTTCCTATCGGTCCCCGC
CCTCGCAGAATGTCGGAACTTAATTTAAAAGAAACAAAGTCACCTATGCCACAAGCGACT
TCTTTCTTTATTTTTACCCCAACTAATCCGTTCCGGAAGTGGTGTCACTTTATCGCCAAC
AACAACATATTCAACAACGGTATTTTCGTGTGTATTATGCTAAGCAGCGTGGCGCTTGCA
TGCGAAGATCCAATTGACTCTAAATCCGAGCTGAACGAAGTCCTCAAATACTTCGATTAC
GTGTTCACTGGGATTTTCACGGTGGAGATAATTTTGAAAATGGTTGCATACGGCGTCATT
CTGCATAAAGGATCGTTCTGTCGAAATTCGTTTAATTTATTGGACCTGCTGGTTGTGGGC
GTTTCCCTTATATCAATATTTGGAAATTCTGACGGATTCTCTGTGGTCAAAATCCTTCGT
GTTCTTCGAGTTTTAAGGCCGCTGCGAGCGATCAACAGAGCTAAAGGCTTGAAGCATGTA
GTACAGTGTGTCATCGTCGCTATAAGTACGATTGGTAACATCTTCATCATAACGACGCTA
CTGCAGTTTATGTTCGCATGCATCGGCGTCCAGTTGTTTAAAGGAAGACTTTACGGTTGC
ACGGACGAGTCCAAGTCCACACGCGAGGAATGCAAGGGCGACTTTTACGCAATACCACAG
GATGGGTTCGGCCAACCGCATATCAAGAAGAGAGAATGGGTGAATAACGACTTTAATTAT
GACAACGTGTTAAATGCGATGCTGACGTTGTTCGTCGTAGCAACTTTCGAAGGGTGGCCA
GCGCTTCTGTACAAATCAATTGACTCATGGAAGGAGGGTGTTGGTCCAAAATATGATGCT
CGACCCGCAGTTGCCCTCTTCTATTTCATTTACATCATCGTGATTGCCTTCTTTATGATG
AACATTTTTGTTGGTTTTGTTATTGTCACCTTTCAAGAGCAAGGAGAGCAGGAGTATAGG
AATTGTGAGCTTGATAAGAACCAGAGACAATGTGTGGAGTATGCATTAAAAGCAAAACCA
ACTCGGAGATACATACCAAAGAATCCATGGCAGTACAAAGCCTGGTTCGTTGTCAATTCA
ACTTACTTCGAGTACTTCATGCTTGTATTGATTTTGCTCAATACAGTGTGCCTTGCAATC
CAGCATTACCAACAAGATGCTGGTCTAACAAGAATCCTCAACCACATGAATCTTGTGTTT
ACCACACTGTTCACCATTGAAATGATATTCAAACTGATCGCCTTCAAACCCAGGGGTTAC
ATTAGCGATCCATGGAACATTTTCGACTTTCTTGTAGTAATAGGCAGTATTGTAGACATT
TTACTGTCAAAAATAGACACACACTACTTTGGTGACCCTTGGAACACATTCGATGCTATT
ATTGTCTTCGGTAGCATAGCCGACGCAGTGACTACCTTTATAGTAGAAACCCACATCTCA
TTTTCAGCTTTAAATGGCACAAGTCACATGAACAGCAAGATATGTTCCTTCAGTATCAAT
TTCTTTCGTCTCTTCCGTGTAATGCGATTGGTGAAGCTTTTAAGCAGAGGAGAAGGCATT
CGGACACTTCTCTGGACTTTTATTAAATCTTTTCAGGCTCTTCCATATGTTGCACTACTG
ATCGTTCTTCTGTTTTTCATTTATGCTGTGATTGGAATGCAAGTCTTTGGGAAAGTAAAG
CCAATAGACGGAGAACAAATTAATCGGAATAATAACTTTCAAACTTTCATTCAATCAGTT
CTGCTGCTCTTTAGATGCGCCACAGGTGAATCCTGGCAGGAGGTGATGCTGGCAGCTGCC
AGTGGTAAGGAGTGTGATGACAGATCAGATTGGAACAGTACTGGGCTGGCCTCACCTGAG
GATAAGTTTGCCTGCGGCAGTGATTTCTCTTACACATACTTCCTCACATTCTACATGCTC
TGTGCCTTTTTGATCATCAATTTATTCGTTGCTGTCATTATGGACAACTTTGACTATCTG
ACACGTGATTGGTCTATTCTTGGACCGCATCACCTAGATGAGTTTAAGACAGTGTGGTCA
GAGTATGACCCTGAGGCAAAAGGTCGTATAAAACATCTGAATGTGGTAAAGCTACTTCGG
AGGATTCAACCTCCTCTTGGATTTGGGAAGTTGTGTCCGCAGAGGATGGCTTGTAGGAAA
CTGGTGACAATGAATATGCCACTGAACAGTGATGGAACTGTCATGTTCAATGCTACACTA
TTTGCATTAATTAGAACATCACTAAATATTAAAACTGAAGGAAACATTGACCAGGCAAAT
GAAGAACTTCGAGCTGTCATTAAAAAAATATGGAAGCGAACATCTATCAAGTTGCTTGAT
CAGATAGCGCCTCCTGCTGGAAATGATGATATCACAGTGGGCAAGTTCTATGCTACGTAC
CTCATTCAAGATTACTTCCGAAAATTCCGAGAAAGAAAAGCTGCAGCAAAGCTTGCTAAT
GACAAAAGTAAAGGTTTATCAGGAGCAAACATGCAAAATCATAAAGATGCTGGACTACGG
GCACTGCAGGATGCAGGACCAGAGATAAAGAGAGCAATATCAGGCGGTATTGCACATGAC
GAACCTTACGCTTCAAATGATGAAAATGAACCAGAACACAGGAGAAGACACAGTTTGTTT
GGAATGTTAAGAAGGAACAGTGCAACAACACCCACTGCATCAAAACGTCCGCTCCAAGTT
GAAAGTGATGACCACAAGAAGAGATATAGTGGAAGGTTTCTGACATCTCAGAGTCCAATG
TTGAATCGCCTGACACCAAAATCGCGATCCATACATGACATTGTGATGGCTGCACGTGCC
CAGCATTCTGGTCAGAGTGGAGATGAAACTACGAGCAGCATTGCCAGCCCTACAGACGAG
TCACTTGGGAGGAATGACTACCACAGCCGCTCTGCTGTCACGCATGGAGAGAACTCAAAT
GTTAACAACTCCTCCTCAAACTATAGTTTCTCAAGTTATGCAACTGATGATGAACTCAAC
TCTGTGGGAGGTTATTATGATGAGCATGCTCCTCTGCATCCTGCTGCTCGATCCGAGAGG
AAATACAATGACCACCAAAGGTACCCAAGCTATGCAAAGCGATGGGACAGGTCGGTGTAT
CGTTGCGATGATGACAGCAGAACTGTGCTCTACCCACTCCTACCTGTGCACTCACGGGAT
GAGGAAAGTGAATATGAGACAGATCATACAACATATGCAGCAGCACCTTACCGCTGTAAT
GATGAGACCTGCTCTGTGGATTTTGAAAAGAGATCAAACTACCAAGCTCAGAATGGTGCT
GTGTCAAATCGGACAAACCGTAGTTTGCCTAATGTTCCTTTGAGGACTTCCATTGATCGT
CCTGTAGCTTTGAATCCACATGACCACCACCATCACAGGGAAAGTGTAAACAATCACACT
AACAGTAATGATAGTGGACCGATGCATTCACGGTACACAATCACCACTCCAAAGCTGAGA
ATTATGGATTCAGACTACGTTCCGACTATCGATCGCTTTGTTCCTCGCAGCCGACAATCA
AAGTCTAAACCACATCGCAGACTCTTGCCAATCCCACCACTTCAACATGCACGGTCGGGC
ACCATACCTTCTCTTCATTTATCAAATCAGGAAGCATGGAGAACGCCACCAAGTTCTCCA
AGACAAGCATTGTCAGTTCGGTCCAATTTAAATTCTCCGATTGGATCCTCAGATGAAGGA
GGATGGGCAACTCCAGCTCAACGGTGGACGAGTGAAAGCAATATGGATACTTTTGGTAGA
GGCAACCATATTAATTACCACGATTCTCGAAGACAGAGTGGTAATGATTTAATTGAAAAG
GTTTTACTGGACGGTGGTCTTCCAGTTCTTGCTCAGGATAAAAACTTTGTGCAAACTATT
TCTAAAGAACTTGCAGATGCTTGTGAACTCAGTTTACCTGAACTACATTCTGCAGCAACC
AATATAATTAACTCTGATCATTCTTTGTATGGAAGTGATGAGTCTTTATGCGGAGACGTG
TCACCAGACAACCATATTGATGATGATGTGACAAGTTTAGAAGAAGGCAGAGTCTGCTTT
CGGCGCAGGTCTAAAACTCGGAAGGATGAACATGGACTTGAGGATGAAATTATAGTTGTC
CCAAACATAACCAGCTAACATCTGGCATCCCACTGGCGCCTTTACCATTTTTTGATGCAT
TCAGGCATCAGGCTCAATGTGAGCAAAGTCACTTGCATTCAAGCGGAGGTGAATTGCATT
TGTGACACTCCGGCAGCATCTAGCCGCCGTGTTTAAAACGTTTTTGTTCTTTGTTGACTT
AGGCACTCGAAGTGCCCTGTTTAGCTTAATGATTGTGTCACCTGTTTGTCTGCTTTGTGT
GTTCCACAGTTGCTGCCCTTGCACATTTAACAGCAGAGATTTCTTTCTTTAGCTCATATC
AGCGAGCAGTGTAAATGCAGACACTTACCGCAGAGCTCTGCTCTTGACATGATTACCTAT
TGTTAAATGCTCGACTAATGTGTTGCTCAAACTTTGTTTGTTTTCCACCATTTTTACTGA
TCTGCCCTTTTCACTCTTTGGCCGGCAAAAAAAATTAAATTAAAAATTTCAACCATCATT
TAAACTAATGTAGCAGCTCCTTCAGTACAAAGTCACCTGATTAGGGGCATAGTATTTATA
AAACTGTTTTAAGTTTCATTTTGCCTTTACATAATGCGTTTGTTCTTTTTATTCATCCTT
TTACTTCGTATCTGGCTTCTTCTGTTCAGTCCCTATGCCGGTCAAGATATATTTTACGGA
ATGTTTAAATTTGAAACAAGATAAAATTAAGTGAAAAAAG
| Gene3D |
Volt_channel_dom_sf (IPR027359) - T[188-316] 1.9E-32 - T[572-694] 8.1E-28 - T[952-1071] 9.3E-31 - T[1271-1367] 1.2E-29 - T[1368-1440] 5.2E-10 |
| Pfam |
Ion_trans_dom (IPR005821) - T[198-480] 2.0E-70 - T[582-820] 6.1E-55 - T[962-1238] 1.1E-61 - T[1281-1361] 2.0E-21 - T[1365-1584] 7.1E-49 |
| PRINTS |
VDCC_L_a1su (IPR005446) - T[226-244] 1.2E-30 - T[277-288] 1.2E-30 - T[479-492] 1.2E-30 - T[559-577] 1.2E-30 - T[648-663] 1.2E-30 |
| PRINTS |
VDCCAlpha1 (IPR002077) - T[319-334] 4.4E-65 - T[431-448] 4.4E-65 - T[470-494] 4.4E-65 - T[747-773] 4.4E-65 - T[1229-1249] 4.4E-65 - T[1443-1457] 4.4E-65 - T[1491-1503] 4.4E-65 |
| Pfam |
GPHH_dom (IPR031649) - T[1586-1656] 2.6E-34 |
| Pfam |
VDCC_a1su_IQ (IPR014873) - T[1657-1730] 6.7E-29 |
| SMART |
VDCC_a1su_IQ (IPR014873) - T[1708-1742] 2.7E-14 |
| Pfam |
CAC1F_C (IPR031688) - T[2185-2258] 4.5E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAC1C_HUMAN | 63.392 % | 2095 | 0 |
| CAC1D_HUMAN | 61.652 % | 1988 | 0 |
| CAC1S_HUMAN | 58.512 % | 1988 | 0 |