- Transcript 'KH2012:KH.C5.184.v1....' >
- Transcript 'Haaura.CG.MTP2014.S8...' >
- Transcript 'Cisavi.CG.ENS81.R352...' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C4.83.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.83.v1.A.SL1-1
Possible name(s)
EPAS1; HIF1A; HIF3A
Gene model
Location
KhC4 [2,861,366 / 2,874,365]
Amino acid sequence
Length: 637
>KH.C4.83.v1.A.SL1-1
LSIKQENPAPVISNDDYVNALNGFILIISTDYDILYASENVKEYLGLSHLDLIVQNILSY
THEGDHDDIRNCFRESEGKSLRKSFFLRMKSTLTPNGKTTNLKSASYKVLRCTGMITPSQ
AQSDTSAFVAHVQPIPHPSNIQHVLDSRTFLSRHSPDMKFTYWDERMSEILDYDAEGLMG
KSFYDYVHVMDAKAIANSFQKLYRLGQIETERYRFLNKNGGYHWVITQATVITGNKNQKA
QCVVCIHYVIGESTETEMIFSSEQLQCARLLQIKEQEATISTQDLTLELSPNCVFDDRPL
TCDVFPVNTAMPEEQQPADDDCSIVPLTFAVLDENDNLCGDDVFFNAPSIGDPWSFTSSA
TSVQEKLEDLFSYVAVDNLQAPQAGQEFCDMSKPQCAPLTHQLNVGKQDFTWNRGENPSA
PVSPCDSAYCGSPIPLLPPFPELEPPDERNVYQQRKRAYQNVPVSSEQYREHQENMRRGF
VLNKDPAFIAKPRKRYRQESECNRKLADMPEFVAAESKRRCYELGQATAQPTKQANNMND
FTFQQFANVLLQPGTGYGPTGNSCGGNKGGAILSSNFLLQPSADFGQANTTGRGLPRNSS
GILPELSLHDCEVNAPLPGRGFFPVGVECVHALDEVF
Nucleotide sequence
Length: 2,805
>KH2012:KH.C4.83.v1.A.SL1-1
ATTTATCAATAAAGCAAGAAAATCCAGCTCCAGTAATATCAAATGATGATTACGTAAATG
CATTGAATGGATTTATTTTAATCATTTCCACGGATTACGACATTCTATACGCCTCTGAAA
ATGTGAAAGAATATCTAGGTCTTTCCCATCTTGACCTCATTGTCCAAAACATACTCTCAT
ACACACATGAAGGGGACCATGATGACATTAGAAACTGCTTCCGAGAAAGTGAAGGTAAAT
CACTGAGGAAGTCCTTCTTCCTAAGAATGAAGAGCACCCTCACTCCAAATGGAAAAACCA
CAAACTTAAAATCCGCATCATATAAAGTTCTCAGATGTACAGGCATGATTACACCAAGTC
AAGCTCAAAGCGATACGTCAGCATTTGTGGCACATGTTCAACCTATACCCCACCCTTCCA
ACATACAACATGTACTCGACAGCAGAACTTTCCTGAGCCGACATTCGCCTGATATGAAGT
TTACATACTGGGATGAGAGAATGTCCGAAATACTTGACTATGATGCAGAAGGCTTGATGG
GAAAATCATTTTATGATTACGTGCATGTTATGGATGCCAAAGCCATTGCGAACAGCTTCC
AAAAATTGTATAGACTGGGACAAATTGAGACAGAGCGCTACAGGTTCCTAAATAAGAATG
GTGGTTACCATTGGGTCATTACACAAGCAACAGTAATTACTGGCAACAAGAATCAAAAAG
CGCAATGTGTCGTCTGCATACACTATGTCATTGGCGAGTCAACAGAGACTGAAATGATTT
TCTCCTCTGAGCAACTACAGTGCGCCAGACTGCTTCAAATAAAAGAACAAGAAGCGACCA
TCTCAACCCAGGACCTAACACTCGAACTATCTCCAAACTGTGTATTCGACGACCGTCCCC
TCACTTGTGACGTATTTCCGGTTAATACAGCTATGCCAGAAGAGCAACAACCGGCCGACG
ACGACTGCAGCATTGTCCCGCTTACTTTCGCTGTACTGGATGAAAACGACAATCTCTGCG
GTGACGATGTCTTTTTCAACGCCCCTTCTATTGGAGACCCGTGGTCTTTTACATCAAGTG
CCACAAGTGTTCAAGAAAAACTGGAAGATCTTTTCAGCTACGTAGCAGTGGATAATCTAC
AAGCCCCGCAAGCTGGGCAAGAGTTTTGCGACATGTCGAAGCCACAATGCGCGCCATTGA
CACACCAACTTAACGTTGGAAAACAAGACTTTACATGGAACCGCGGCGAAAACCCGAGCG
CCCCAGTGAGTCCATGCGACAGTGCATACTGTGGGAGCCCAATACCTTTGCTACCACCTT
TCCCCGAGTTAGAGCCACCAGACGAACGAAACGTCTACCAACAGCGAAAACGGGCCTATC
AAAACGTGCCCGTCTCAAGCGAGCAATACCGCGAGCACCAGGAGAATATGCGTCGAGGTT
TTGTGCTCAACAAAGACCCAGCGTTCATTGCTAAACCAAGAAAACGTTACCGACAAGAAT
CAGAATGCAACAGGAAGCTGGCAGACATGCCTGAATTCGTGGCTGCCGAATCCAAACGCC
GATGCTACGAGCTTGGACAAGCTACAGCCCAGCCAACAAAGCAAGCCAACAACATGAACG
ACTTCACATTCCAACAGTTTGCTAACGTTCTTCTGCAACCTGGTACAGGGTACGGACCGA
CAGGAAATAGCTGCGGCGGTAACAAAGGCGGGGCAATTCTATCGTCCAATTTCTTGCTCC
AACCGTCAGCGGACTTTGGACAAGCAAACACAACTGGGCGAGGTCTTCCACGAAATTCAA
GTGGAATTTTACCCGAGCTTTCGCTGCACGACTGTGAGGTGAATGCCCCTTTACCAGGCC
GTGGCTTTTTCCCTGTAGGCGTGGAATGCGTGCACGCGTTAGACGAAGTGTTCTGACAAC
GGAGTTTTCACTTGCGTTCTGGTAAAGCAGTCTGCAAAAAAAAGCCCGTTTTAAAGTTTC
AATATAACACCAAAGCCGCGATGTCCGCCGCGGAACAGGATTACGGAATCCTGCGTCTGC
GCTGGGTCAGTCGCTAAGGTGTATTTATTTCGTGTAACGTCGTAAAGAGCTCGTTTGCTT
TTTGACCGAATTTCAGGTCAGACATATATTATCCATTGCATCGTCGTAATCGTTTTTTTT
TCTGCAAATTTTTTGTCCTATTTTGAGACTGCAAATTATTGTCTTATTTTGACTTAATTA
TGATCATTAAATATTCCCAAACGGGTAAAACTTTACTAATCACCCGTCCTTATACTTTCT
ATCTCAGCATTGTTTCTTTTCAACTTGAGTTTATCTAAAAGATTCCAAAAATATTTGAAC
TGAGCCGTATTCGTATCAATCGTATTAGCATGTACAGTATAAACGCTGTACATAAATGAC
CTACGATCCCACATACGTACATGATATTTCGATAAACGAAAATTCATTCGTTTAAAAATT
TCCCAAACATTTAGATTTATTGACTTTTTCCTGCTACTTGCTGTGTATGTAAAATGCTTA
AAAGCTCTTTCCCGCTAACAAACGTTAACATTTCCCAAATTCGTTGCCGCTGTTCATTAG
CGCCGTATAGCGTACAAACTTTTGTGCGTTCCACGTTTTGCTTGACGGGCTGTGACTGGT
TTTAACCGGTCTGGCCCAGATCATACCAGCTTGGCTCTATATCCGGCGTAAACACACTGG
CGTTGGTTACGTTTTTCTCTGGTGTTCATTTCTTTAACATTACGCTGTACAGTGTTGTGT
CAAGAGTGGAATAAGTAATGAACCTGAATAAATGAAGGAAGCAGA
| SMART |
PAS (IPR000014) - T[12-78] 1.3E-6 - T[138-204] 6.7E-5 |
| ProSiteProfiles |
PAS (IPR000014) - T[18-80] 10.393 - T[157-206] 9.685 |
| CDD |
PAS (IPR000014) - T[21-98] 2.06035E-8 - T[147-247] 8.35347E-16 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[21-115] 1.44E-9 - T[150-252] 4.84E-25 |
| Pfam |
PAS (IPR000014) - T[23-98] 0.16 |
| TIGRFAM |
PAS (IPR000014) - T[157-240] 2.0E-6 |
| Pfam |
PAS_fold_3 (IPR013655) - T[161-247] 3.5E-18 |
| SMART |
PAC (IPR001610) - T[210-253] 3.0E-4 |
| Pfam |
HIF-1_TAD_C (IPR014887) - T[600-636] 3.4E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EPAS1_HUMAN | 38.889 % | 220 | 1.04E-61 |
| HIF1A_HUMAN | 42.007 % | 244 | 7.2E-71 |
| HIF3A_HUMAN | 38.662 % | 216 | 1.81E-61 |