- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C4.565.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S65...' >
- Transcript 'Cisavi.CG.ENS81.R247...' >
- Transcript 'KH2012:KH.C4.83.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.83.v2.A.nonSL4-1
Possible name(s)
EPAS1; HIF1A; HIF3A
Gene model
Location
KhC4 [2,861,366 / 2,876,771]
Amino acid sequence
Length: 736
>KH.C4.83.v2.A.nonSL4-1
FMLSQFKDNKMLSCENEEVPPSTYRRQRRREKSRDAARCRRNKECDIFQEICDNLPVAHD
VIGQLDRSALLRLVISYIKLRQALPKTMFSDSIADVISDLSIKQENPAPVISNDDYVNAL
NGFILIISTDYDILYASENVKEYLGLSHLDLIVQNILSYTHEGDHDDIRNCFRESEGKSL
RKSFFLRMKSTLTPNGKTTNLKSASYKVLRCTGMITPSQAQSDTSAFVAHVQPIPHPSNI
QHVLDSRTFLSRHSPDMKFTYWDERMSEILDYDAEGLMGKSFYDYVHVMDAKAIANSFQK
LYRLGQIETERYRFLNKNGGYHWVITQATVITGNKNQKAQCVVCIHYVIGESTETEMIFS
SEQLQCARLLQIKEQEATISTQDLTLELSPNCVFDDRPLTCDVFPVNTAMPEEQQPADDD
CSIVPLTFAVLDENDNLCGDDVFFNAPSIGDPWSFTSSATSVQEKLEDLFSYVAVDNLQA
PQAGQEFCDMSKPQCAPLTHQLNVGKQDFTWNRGENPSAPVSPCDSAYCGSPIPLLPPFP
ELEPPDERNVYQQRKRAYQNVPVSSEQYREHQENMRRGFVLNKDPAFIAKPRKRYRQESE
CNRKLADMPEFVAAESKRRCYELGQATAQPTKQANNMNDFTFQQFANVLLQPGTGYGPTG
NSCGGNKGGAILSSNFLLQPSADFGQANTTGRGLPRNSSGILPELSLHDCEVNAPLPGRG
FFPVGVECVHALDEVF
Nucleotide sequence
Length: 3,102
>KH2012:KH.C4.83.v2.A.nonSL4-1
TATTCATGCTGAGCCAGTTCAAAGACAACAAAATGCTTTCATGCGAAAACGAAGAGGTGC
CACCCTCAACATATAGAAGACAGAGGAGGAGAGAGAAAAGCAGAGATGCAGCACGGTGCC
GAAGAAACAAAGAATGCGACATTTTTCAAGAAATCTGTGATAATCTTCCTGTTGCACATG
ATGTTATTGGACAATTAGACAGATCAGCTTTATTAAGATTGGTGATCAGTTACATCAAAC
TGAGACAAGCGTTACCCAAAACAATGTTCTCTGATTCTATAGCGGATGTTATATCAGATT
TATCAATAAAGCAAGAAAATCCAGCTCCAGTAATATCAAATGATGATTACGTAAATGCAT
TGAATGGATTTATTTTAATCATTTCCACGGATTACGACATTCTATACGCCTCTGAAAATG
TGAAAGAATATCTAGGTCTTTCCCATCTTGACCTCATTGTCCAAAACATACTCTCATACA
CACATGAAGGGGACCATGATGACATTAGAAACTGCTTCCGAGAAAGTGAAGGTAAATCAC
TGAGGAAGTCCTTCTTCCTAAGAATGAAGAGCACCCTCACTCCAAATGGAAAAACCACAA
ACTTAAAATCCGCATCATATAAAGTTCTCAGATGTACAGGCATGATTACACCAAGTCAAG
CTCAAAGCGATACGTCAGCATTTGTGGCACATGTTCAACCTATACCCCACCCTTCCAACA
TACAACATGTACTCGACAGCAGAACTTTCCTGAGCCGACATTCGCCTGATATGAAGTTTA
CATACTGGGATGAGAGAATGTCCGAAATACTTGACTATGATGCAGAAGGCTTGATGGGAA
AATCATTTTATGATTACGTGCATGTTATGGATGCCAAAGCCATTGCGAACAGCTTCCAAA
AATTGTATAGACTGGGACAAATTGAGACAGAGCGCTACAGGTTCCTAAATAAGAATGGTG
GTTACCATTGGGTCATTACACAAGCAACAGTAATTACTGGCAACAAGAATCAAAAAGCGC
AATGTGTCGTCTGCATACACTATGTCATTGGCGAGTCAACAGAGACTGAAATGATTTTCT
CCTCTGAGCAACTACAGTGCGCCAGACTGCTTCAAATAAAAGAACAAGAAGCGACCATCT
CAACCCAGGACCTAACACTCGAACTATCTCCAAACTGTGTATTCGACGACCGTCCCCTCA
CTTGTGACGTATTTCCGGTTAATACAGCTATGCCAGAAGAGCAACAACCGGCCGACGACG
ACTGCAGCATTGTCCCGCTTACTTTCGCTGTACTGGATGAAAACGACAATCTCTGCGGTG
ACGATGTCTTTTTCAACGCCCCTTCTATTGGAGACCCGTGGTCTTTTACATCAAGTGCCA
CAAGTGTTCAAGAAAAACTGGAAGATCTTTTCAGCTACGTAGCAGTGGATAATCTACAAG
CCCCGCAAGCTGGGCAAGAGTTTTGCGACATGTCGAAGCCACAATGCGCGCCATTGACAC
ACCAACTTAACGTTGGAAAACAAGACTTTACATGGAACCGCGGCGAAAACCCGAGCGCCC
CAGTGAGTCCATGCGACAGTGCATACTGTGGGAGCCCAATACCTTTGCTACCACCTTTCC
CCGAGTTAGAGCCACCAGACGAACGAAACGTCTACCAACAGCGAAAACGGGCCTATCAAA
ACGTGCCCGTCTCAAGCGAGCAATACCGCGAGCACCAGGAGAATATGCGTCGAGGTTTTG
TGCTCAACAAAGACCCAGCGTTCATTGCTAAACCAAGAAAACGTTACCGACAAGAATCAG
AATGCAACAGGAAGCTGGCAGACATGCCTGAATTCGTGGCTGCCGAATCCAAACGCCGAT
GCTACGAGCTTGGACAAGCTACAGCCCAGCCAACAAAGCAAGCCAACAACATGAACGACT
TCACATTCCAACAGTTTGCTAACGTTCTTCTGCAACCTGGTACAGGGTACGGACCGACAG
GAAATAGCTGCGGCGGTAACAAAGGCGGGGCAATTCTATCGTCCAATTTCTTGCTCCAAC
CGTCAGCGGACTTTGGACAAGCAAACACAACTGGGCGAGGTCTTCCACGAAATTCAAGTG
GAATTTTACCCGAGCTTTCGCTGCACGACTGTGAGGTGAATGCCCCTTTACCAGGCCGTG
GCTTTTTCCCTGTAGGCGTGGAATGCGTGCACGCGTTAGACGAAGTGTTCTGACAACGGA
GTTTTCACTTGCGTTCTGGTAAAGCAGTCTGCAAAAAAAAGCCCGTTTTAAAGTTTCAAT
ATAACACCAAAGCCGCGATGTCCGCCGCGGAACAGGATTACGGAATCCTGCGTCTGCGCT
GGGTCAGTCGCTAAGGTGTATTTATTTCGTGTAACGTCGTAAAGAGCTCGTTTGCTTTTT
GACCGAATTTCAGGTCAGACATATATTATCCATTGCATCGTCGTAATCGTTTTTTTTTCT
GCAAATTTTTTGTCCTATTTTGAGACTGCAAATTATTGTCTTATTTTGACTTAATTATGA
TCATTAAATATTCCCAAACGGGTAAAACTTTACTAATCACCCGTCCTTATACTTTCTATC
TCAGCATTGTTTCTTTTCAACTTGAGTTTATCTAAAAGATTCCAAAAATATTTGAACTGA
GCCGTATTCGTATCAATCGTATTAGCATGTACAGTATAAACGCTGTACATAAATGACCTA
CGATCCCACATACGTACATGATATTTCGATAAACGAAAATTCATTCGTTTAAAAATTTCC
CAAACATTTAGATTTATTGACTTTTTCCTGCTACTTGCTGTGTATGTAAAATGCTTAAAA
GCTCTTTCCCGCTAACAAACGTTAACATTTCCCAAATTCGTTGCCGCTGTTCATTAGCGC
CGTATAGCGTACAAACTTTTGTGCGTTCCACGTTTTGCTTGACGGGCTGTGACTGGTTTT
AACCGGTCTGGCCCAGATCATACCAGCTTGGCTCTATATCCGGCGTAAACACACTGGCGT
TGGTTACGTTTTTCTCTGGTGTTCATTTCTTTAACATTACGCTGTACAGTGTTGTGTCAA
GAGTGGAATAAGTAATGAACCTGAATAAATGAAGGAAGCAGA
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[25-88] 7.27E-6 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[28-81] 10.944 |
| CDD |
bHLH_dom (IPR011598) - T[31-84] 3.47102E-4 |
| SMART |
PAS (IPR000014) - T[111-177] 1.3E-6 - T[237-303] 6.7E-5 |
| ProSiteProfiles |
PAS (IPR000014) - T[117-179] 10.393 - T[256-305] 9.685 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[120-214] 1.83E-9 - T[249-351] 6.02E-25 |
| CDD |
PAS (IPR000014) - T[120-197] 2.50292E-8 - T[246-346] 1.01464E-15 |
| Pfam |
PAS (IPR000014) - T[122-197] 0.19 |
| TIGRFAM |
PAS (IPR000014) - T[256-339] 2.5E-6 |
| Pfam |
PAS_fold_3 (IPR013655) - T[260-346] 4.3E-18 |
| SMART |
PAC (IPR001610) - T[309-352] 3.0E-4 |
| Pfam |
HIF-1_TAD_C (IPR014887) - T[699-735] 4.1E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EPAS1_HUMAN | 37.604 % | 275 | 7.07E-81 |
| HIF1A_HUMAN | 41.061 % | 301 | 6.74E-91 |
| HIF3A_HUMAN | 35.955 % | 253 | 2.63E-74 |