- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.S345.3.v1....' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.C6.15.v5.A...' >
- Transcript 'KH2012:KH.C4.83.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C4.83.v2.A.SL2-1
Possible name(s)
EPAS1; HIF1A; HIF3A
Gene model
Location
KhC4 [2,861,366 / 2,876,805]
Amino acid sequence
Length: 744
>KH.C4.83.v2.A.SL2-1
KLTLIYYLFMLSQFKDNKMLSCENEEVPPSTYRRQRRREKSRDAARCRRNKECDIFQEIC
DNLPVAHDVIGQLDRSALLRLVISYIKLRQALPKTMFSDSIADVISDLSIKQENPAPVIS
NDDYVNALNGFILIISTDYDILYASENVKEYLGLSHLDLIVQNILSYTHEGDHDDIRNCF
RESEGKSLRKSFFLRMKSTLTPNGKTTNLKSASYKVLRCTGMITPSQAQSDTSAFVAHVQ
PIPHPSNIQHVLDSRTFLSRHSPDMKFTYWDERMSEILDYDAEGLMGKSFYDYVHVMDAK
AIANSFQKLYRLGQIETERYRFLNKNGGYHWVITQATVITGNKNQKAQCVVCIHYVIGES
TETEMIFSSEQLQCARLLQIKEQEATISTQDLTLELSPNCVFDDRPLTCDVFPVNTAMPE
EQQPADDDCSIVPLTFAVLDENDNLCGDDVFFNAPSIGDPWSFTSSATSVQEKLEDLFSY
VAVDNLQAPQAGQEFCDMSKPQCAPLTHQLNVGKQDFTWNRGENPSAPVSPCDSAYCGSP
IPLLPPFPELEPPDERNVYQQRKRAYQNVPVSSEQYREHQENMRRGFVLNKDPAFIAKPR
KRYRQESECNRKLADMPEFVAAESKRRCYELGQATAQPTKQANNMNDFTFQQFANVLLQP
GTGYGPTGNSCGGNKGGAILSSNFLLQPSADFGQANTTGRGLPRNSSGILPELSLHDCEV
NAPLPGRGFFPVGVECVHALDEVF
Nucleotide sequence
Length: 3,136
>KH2012:KH.C4.83.v2.A.SL2-1
AGCTAAGGCTAAAAGTTGACACTGATATATTATTTATTCATGCTGAGCCAGTTCAAAGAC
AACAAAATGCTTTCATGCGAAAACGAAGAGGTGCCACCCTCAACATATAGAAGACAGAGG
AGGAGAGAGAAAAGCAGAGATGCAGCACGGTGCCGAAGAAACAAAGAATGCGACATTTTT
CAAGAAATCTGTGATAATCTTCCTGTTGCACATGATGTTATTGGACAATTAGACAGATCA
GCTTTATTAAGATTGGTGATCAGTTACATCAAACTGAGACAAGCGTTACCCAAAACAATG
TTCTCTGATTCTATAGCGGATGTTATATCAGATTTATCAATAAAGCAAGAAAATCCAGCT
CCAGTAATATCAAATGATGATTACGTAAATGCATTGAATGGATTTATTTTAATCATTTCC
ACGGATTACGACATTCTATACGCCTCTGAAAATGTGAAAGAATATCTAGGTCTTTCCCAT
CTTGACCTCATTGTCCAAAACATACTCTCATACACACATGAAGGGGACCATGATGACATT
AGAAACTGCTTCCGAGAAAGTGAAGGTAAATCACTGAGGAAGTCCTTCTTCCTAAGAATG
AAGAGCACCCTCACTCCAAATGGAAAAACCACAAACTTAAAATCCGCATCATATAAAGTT
CTCAGATGTACAGGCATGATTACACCAAGTCAAGCTCAAAGCGATACGTCAGCATTTGTG
GCACATGTTCAACCTATACCCCACCCTTCCAACATACAACATGTACTCGACAGCAGAACT
TTCCTGAGCCGACATTCGCCTGATATGAAGTTTACATACTGGGATGAGAGAATGTCCGAA
ATACTTGACTATGATGCAGAAGGCTTGATGGGAAAATCATTTTATGATTACGTGCATGTT
ATGGATGCCAAAGCCATTGCGAACAGCTTCCAAAAATTGTATAGACTGGGACAAATTGAG
ACAGAGCGCTACAGGTTCCTAAATAAGAATGGTGGTTACCATTGGGTCATTACACAAGCA
ACAGTAATTACTGGCAACAAGAATCAAAAAGCGCAATGTGTCGTCTGCATACACTATGTC
ATTGGCGAGTCAACAGAGACTGAAATGATTTTCTCCTCTGAGCAACTACAGTGCGCCAGA
CTGCTTCAAATAAAAGAACAAGAAGCGACCATCTCAACCCAGGACCTAACACTCGAACTA
TCTCCAAACTGTGTATTCGACGACCGTCCCCTCACTTGTGACGTATTTCCGGTTAATACA
GCTATGCCAGAAGAGCAACAACCGGCCGACGACGACTGCAGCATTGTCCCGCTTACTTTC
GCTGTACTGGATGAAAACGACAATCTCTGCGGTGACGATGTCTTTTTCAACGCCCCTTCT
ATTGGAGACCCGTGGTCTTTTACATCAAGTGCCACAAGTGTTCAAGAAAAACTGGAAGAT
CTTTTCAGCTACGTAGCAGTGGATAATCTACAAGCCCCGCAAGCTGGGCAAGAGTTTTGC
GACATGTCGAAGCCACAATGCGCGCCATTGACACACCAACTTAACGTTGGAAAACAAGAC
TTTACATGGAACCGCGGCGAAAACCCGAGCGCCCCAGTGAGTCCATGCGACAGTGCATAC
TGTGGGAGCCCAATACCTTTGCTACCACCTTTCCCCGAGTTAGAGCCACCAGACGAACGA
AACGTCTACCAACAGCGAAAACGGGCCTATCAAAACGTGCCCGTCTCAAGCGAGCAATAC
CGCGAGCACCAGGAGAATATGCGTCGAGGTTTTGTGCTCAACAAAGACCCAGCGTTCATT
GCTAAACCAAGAAAACGTTACCGACAAGAATCAGAATGCAACAGGAAGCTGGCAGACATG
CCTGAATTCGTGGCTGCCGAATCCAAACGCCGATGCTACGAGCTTGGACAAGCTACAGCC
CAGCCAACAAAGCAAGCCAACAACATGAACGACTTCACATTCCAACAGTTTGCTAACGTT
CTTCTGCAACCTGGTACAGGGTACGGACCGACAGGAAATAGCTGCGGCGGTAACAAAGGC
GGGGCAATTCTATCGTCCAATTTCTTGCTCCAACCGTCAGCGGACTTTGGACAAGCAAAC
ACAACTGGGCGAGGTCTTCCACGAAATTCAAGTGGAATTTTACCCGAGCTTTCGCTGCAC
GACTGTGAGGTGAATGCCCCTTTACCAGGCCGTGGCTTTTTCCCTGTAGGCGTGGAATGC
GTGCACGCGTTAGACGAAGTGTTCTGACAACGGAGTTTTCACTTGCGTTCTGGTAAAGCA
GTCTGCAAAAAAAAGCCCGTTTTAAAGTTTCAATATAACACCAAAGCCGCGATGTCCGCC
GCGGAACAGGATTACGGAATCCTGCGTCTGCGCTGGGTCAGTCGCTAAGGTGTATTTATT
TCGTGTAACGTCGTAAAGAGCTCGTTTGCTTTTTGACCGAATTTCAGGTCAGACATATAT
TATCCATTGCATCGTCGTAATCGTTTTTTTTTCTGCAAATTTTTTGTCCTATTTTGAGAC
TGCAAATTATTGTCTTATTTTGACTTAATTATGATCATTAAATATTCCCAAACGGGTAAA
ACTTTACTAATCACCCGTCCTTATACTTTCTATCTCAGCATTGTTTCTTTTCAACTTGAG
TTTATCTAAAAGATTCCAAAAATATTTGAACTGAGCCGTATTCGTATCAATCGTATTAGC
ATGTACAGTATAAACGCTGTACATAAATGACCTACGATCCCACATACGTACATGATATTT
CGATAAACGAAAATTCATTCGTTTAAAAATTTCCCAAACATTTAGATTTATTGACTTTTT
CCTGCTACTTGCTGTGTATGTAAAATGCTTAAAAGCTCTTTCCCGCTAACAAACGTTAAC
ATTTCCCAAATTCGTTGCCGCTGTTCATTAGCGCCGTATAGCGTACAAACTTTTGTGCGT
TCCACGTTTTGCTTGACGGGCTGTGACTGGTTTTAACCGGTCTGGCCCAGATCATACCAG
CTTGGCTCTATATCCGGCGTAAACACACTGGCGTTGGTTACGTTTTTCTCTGGTGTTCAT
TTCTTTAACATTACGCTGTACAGTGTTGTGTCAAGAGTGGAATAAGTAATGAACCTGAAT
AAATGAAGGAAGCAGA
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[33-96] 7.41E-6 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[36-89] 10.944 |
| CDD |
bHLH_dom (IPR011598) - T[39-92] 3.50958E-4 |
| SMART |
PAS (IPR000014) - T[119-185] 1.3E-6 - T[245-311] 6.7E-5 |
| ProSiteProfiles |
PAS (IPR000014) - T[125-187] 10.393 - T[264-313] 9.685 |
| SUPERFAMILY |
PAS-like_dom_sf (IPR035965) - T[128-222] 1.83E-9 - T[257-359] 6.15E-25 |
| CDD |
PAS (IPR000014) - T[128-205] 2.55684E-8 - T[254-354] 1.04662E-15 |
| Pfam |
PAS (IPR000014) - T[130-205] 0.2 |
| TIGRFAM |
PAS (IPR000014) - T[264-347] 2.5E-6 |
| Pfam |
PAS_fold_3 (IPR013655) - T[268-354] 4.4E-18 |
| SMART |
PAC (IPR001610) - T[317-360] 3.0E-4 |
| Pfam |
HIF-1_TAD_C (IPR014887) - T[707-743] 4.1E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EPAS1_HUMAN | 37.604 % | 275 | 8.21E-81 |
| HIF1A_HUMAN | 41.061 % | 301 | 8.37E-91 |
| HIF3A_HUMAN | 35.955 % | 253 | 4.85E-74 |