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  1. Transcript 'KH2012:KH.L170.28.v3...'
  2. Clone 'cien125090'
  3. Transcript 'KH2012:KH.C10.78.v2....'
  4. Transcript 'KH2012:KH.C12.47.v2....'
  5. Transcript 'KH2012:KH.C5.109.v4....'

Transcript Model

Transcript Id

KH2012:KH.C5.109.v4.A.nonSL3-1

Possible name(s)

AC113404.3; RAP1A; RAP1B

Location

KhC5 [2,174,074 / 2,184,578]

Sequences

Amino acid sequence

Length: 196

>KH.C5.109.v4.A.nonSL3-1
FIFSDPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAEN
QQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDE
VPMILVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENIFFDLVKQINRKT
PEPKKKKKKNSGCIVL

Nucleotide sequence

Length: 2,567

>KH2012:KH.C5.109.v4.A.nonSL3-1
GGACTGTTGTAAGTAGCTGTTGTATGTTAAGCGCCATAATTACACAAGAAAGAAAAGAGA
TTAATTTAAGGTTAGTAAGGTTAATTGAATGTTGAAACATTTGTATAATTTGGTACAAAC
CCCATTATTGATGTGGATGCCAATACGTTTAAGCTGTGCTGTGTGTAATGGGTTTTGTAA
TTAATTATTAGATATGGCTGTGCCGGTACAAGAGTATGATTTACTGTCACAGGATTCTGG
GTGTTTTTTTTCTTCAGTTTTTAAACAAAGCATTTTTCATGTCTGTTTGATTTAAGCTGT
TGGTGTAGTGGTTAAGAGGAACTTTTTATTTTTAAGGAACTGATACTTGTGGAGTTGTGG
TTAGTAGGCCCACTGTCTTCCTTTGTTGGTTCATAACAGCAATACTTGTGAATAAACCCT
TTACCATTCAGTCTGCGCAATATGACAATTCTTTATAAGATCTCAGCAAGCAAAATAGGA
AATAACACTTTTTACATATCTATTTTAAAACAGATTTGGTTCATTGACATTGTTTAAAAA
ATAACATGTACGACCAAGGCGTGCAAAACTAAAAGTTTGTAAAAAAAATTGCGCTACACC
GATCATACTCAGCAGACGGTTTAACAATTCTCTATTGAAAACCCTTTTCAAAAAGTTTAT
GTATATATATGTGTATATATAAATTTTTAAATATTGATTTATCTTTTCAGATCCCGGTGA
CAAAGGTCTAGTAATGAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGAA
AAGTGCACTGACAGTTCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCAT
TGAGGACAGCTATAGAAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTCT
TGATACTGCTGGAACGGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGCA
AGGGTTTGTGCTTGTGTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACTT
AAGGGAGCAGATATTAAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAAA
CAAATGCGATTTGGAAGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTAG
GCAGTGGCATTGCTCCTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATAT
TTTTTTCGACCTAGTGAAACAAATCAACCGAAAAACACCAGAACCTAAGAAGAAAAAGAA
GAAAAACTCTGGTTGTATTGTTTTGTAACCTTACCCTAACCAGCTCGGTGTCCTTACTTG
TGATTGGTTAGTTCGTCCCTTGTTTCCGCCAATCACGTTCGAACCGTCTAAACAACATCT
CGTGACCGACGGTTCCGCATCACCGAGCCATCCAATAAGCAAGCGACATCGTTTAGCACG
AAGCAAGCATTGCTTCACTTTTACCTTTTTTCATTTTTTCCATAGATTTGCTTTGAAACG
GATGGGCTTTAGTTTAATCATTATTTCGCAGTGTTTCGCTCTCACACCAGGGGAACCACC
GCTACGTATCTAACACAACAATAACTAAACCCATAGTAAATAATTCTTCGTATTTATTAT
TTTGTGTTAAAACCGCACCACCGACCGAATGACGTCATGAGTTGCCCGCACCAGTTTTTG
TGTGCGTTACGTCACGAATAATTATGACGTCGCAAATGAACAGAATTGCATAATTTCAGC
AATTACTCGTTTGGATTTAATTTTTCCGTTATAATTCGAATTGGTAAAATCTTCATATTT
CGGCCCGGGCAATTCGTAACAAAATATCCGCATGCGCTCATAAAGACACCGCTACCCTCC
CCAACCCCCGACTGCCATGGTGCTTAGGATGAACTGTGGTTCGCTTGGTGAATTAATTTA
TTTGTCGGATCGTGTGAAACCTTTAATCGCATCTAATCTATTAAGCAGAAAGCGTAAAAT
CATTAACTTAATGATTTCGTCCGCATAACCCCTTCAACCTTCTATAGTTTGATCAGTGTT
TTGTACATATACCTTTGTGACGTCACACTTGACCATTTCCACCCATAGTGACGTCATAAT
GGAGTAGTATGACGCAAGAATCCCCCAACTCTGCTTGTATAAAGAGCCCTCCTACAACGA
CCACAAAGGGTTATATTTTCGCCTCTTTATTTCCTATACGAGCAAGTACGCATTTCCCTT
TGCTGTTTTATTGCATATAACGTCGTTTAACCTTGCTGTTATCCAACCTAAGTAACTCTT
TTTTTTCATCACTTTAAATTAACTCCTTCGCCTAGAAAATAGTTTTAGAAAATCTCATAT
TTTCATTTGTAACCTTGAACCTAGTCGAATAACACAGCGTAAGTTCTATTGCATTCTAAT
AGTGTTGCATTTTAACGCGTAGCGGTGCCACAACTGCTGCATTCTTCGCCTTAGATTTGG
TTTCAAATTAGACGGTAGAATCTTTTAACCCACTCCTAAAATATGCTTTTAATTCCGAGT
TGAATGTAACGATTTGTACATAAATAAATAAAGTACCGGCCTTATAA

InterProScan

ProSiteProfiles
Small_GTPase_Ras (IPR020849) - T[11-196] 45.031
PANTHER
Small_GTPase_Ras (IPR020849) - T[13-196] 2.4E-104
TIGRFAM
Small_GTP-bd_dom (IPR005225) - T[13-169] 8.7E-33
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[14-176] 4.76E-53
Pfam
Small_GTPase (IPR001806) - T[17-177] 2.2E-57

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RAP1B_HUMAN 82.778 % 313 9.83E-111
RAP1A_HUMAN 84.118 % 301 6.83E-106
RP1BL_HUMAN 81.667 % 308 9.3E-109





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