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- Transcript 'Boleac.CG.SB_v3.S71....' >
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- Transcript 'KH2012:KH.C5.109.v4....'
Transcript Model
Transcript Id
KH2012:KH.C5.109.v4.A.nonSL3-1
Possible name(s)
AC113404.3; RAP1A; RAP1B
Gene model
Location
KhC5 [2,174,074 / 2,184,578]
Amino acid sequence
Length: 196
>KH.C5.109.v4.A.nonSL3-1
FIFSDPGDKGLVMREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEAEN
QQCMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITSQASFNDLTDLREQILRVKDTDE
VPMILVGNKCDLEDERIVTREQGELLSRQWHCSFMETSARTKINVENIFFDLVKQINRKT
PEPKKKKKKNSGCIVL
Nucleotide sequence
Length: 2,567
>KH2012:KH.C5.109.v4.A.nonSL3-1
GGACTGTTGTAAGTAGCTGTTGTATGTTAAGCGCCATAATTACACAAGAAAGAAAAGAGA
TTAATTTAAGGTTAGTAAGGTTAATTGAATGTTGAAACATTTGTATAATTTGGTACAAAC
CCCATTATTGATGTGGATGCCAATACGTTTAAGCTGTGCTGTGTGTAATGGGTTTTGTAA
TTAATTATTAGATATGGCTGTGCCGGTACAAGAGTATGATTTACTGTCACAGGATTCTGG
GTGTTTTTTTTCTTCAGTTTTTAAACAAAGCATTTTTCATGTCTGTTTGATTTAAGCTGT
TGGTGTAGTGGTTAAGAGGAACTTTTTATTTTTAAGGAACTGATACTTGTGGAGTTGTGG
TTAGTAGGCCCACTGTCTTCCTTTGTTGGTTCATAACAGCAATACTTGTGAATAAACCCT
TTACCATTCAGTCTGCGCAATATGACAATTCTTTATAAGATCTCAGCAAGCAAAATAGGA
AATAACACTTTTTACATATCTATTTTAAAACAGATTTGGTTCATTGACATTGTTTAAAAA
ATAACATGTACGACCAAGGCGTGCAAAACTAAAAGTTTGTAAAAAAAATTGCGCTACACC
GATCATACTCAGCAGACGGTTTAACAATTCTCTATTGAAAACCCTTTTCAAAAAGTTTAT
GTATATATATGTGTATATATAAATTTTTAAATATTGATTTATCTTTTCAGATCCCGGTGA
CAAAGGTCTAGTAATGAGGGAATACAAGCTTGTTGTGCTTGGCTCTGGGGGTGTGGGGAA
AAGTGCACTGACAGTTCAATTTGTCCAAGGAATCTTTGTGGAGAAATACGACCCCACCAT
TGAGGACAGCTATAGAAAACAAGTTGAGGCAGAAAACCAGCAATGTATGCTTGAAATTCT
TGATACTGCTGGAACGGAACAATTCACGGCAATGCGAGATCTGTACATGAAGAATGGGCA
AGGGTTTGTGCTTGTGTACAGCATCACATCTCAAGCCTCGTTTAATGATCTCACTGACTT
AAGGGAGCAGATATTAAGAGTAAAAGATACTGATGAGGTTCCCATGATATTAGTTGGAAA
CAAATGCGATTTGGAAGACGAGAGGATTGTAACAAGAGAGCAAGGGGAACTGTTATCTAG
GCAGTGGCATTGCTCCTTCATGGAGACTTCAGCCAGGACCAAAATCAATGTTGAAAATAT
TTTTTTCGACCTAGTGAAACAAATCAACCGAAAAACACCAGAACCTAAGAAGAAAAAGAA
GAAAAACTCTGGTTGTATTGTTTTGTAACCTTACCCTAACCAGCTCGGTGTCCTTACTTG
TGATTGGTTAGTTCGTCCCTTGTTTCCGCCAATCACGTTCGAACCGTCTAAACAACATCT
CGTGACCGACGGTTCCGCATCACCGAGCCATCCAATAAGCAAGCGACATCGTTTAGCACG
AAGCAAGCATTGCTTCACTTTTACCTTTTTTCATTTTTTCCATAGATTTGCTTTGAAACG
GATGGGCTTTAGTTTAATCATTATTTCGCAGTGTTTCGCTCTCACACCAGGGGAACCACC
GCTACGTATCTAACACAACAATAACTAAACCCATAGTAAATAATTCTTCGTATTTATTAT
TTTGTGTTAAAACCGCACCACCGACCGAATGACGTCATGAGTTGCCCGCACCAGTTTTTG
TGTGCGTTACGTCACGAATAATTATGACGTCGCAAATGAACAGAATTGCATAATTTCAGC
AATTACTCGTTTGGATTTAATTTTTCCGTTATAATTCGAATTGGTAAAATCTTCATATTT
CGGCCCGGGCAATTCGTAACAAAATATCCGCATGCGCTCATAAAGACACCGCTACCCTCC
CCAACCCCCGACTGCCATGGTGCTTAGGATGAACTGTGGTTCGCTTGGTGAATTAATTTA
TTTGTCGGATCGTGTGAAACCTTTAATCGCATCTAATCTATTAAGCAGAAAGCGTAAAAT
CATTAACTTAATGATTTCGTCCGCATAACCCCTTCAACCTTCTATAGTTTGATCAGTGTT
TTGTACATATACCTTTGTGACGTCACACTTGACCATTTCCACCCATAGTGACGTCATAAT
GGAGTAGTATGACGCAAGAATCCCCCAACTCTGCTTGTATAAAGAGCCCTCCTACAACGA
CCACAAAGGGTTATATTTTCGCCTCTTTATTTCCTATACGAGCAAGTACGCATTTCCCTT
TGCTGTTTTATTGCATATAACGTCGTTTAACCTTGCTGTTATCCAACCTAAGTAACTCTT
TTTTTTCATCACTTTAAATTAACTCCTTCGCCTAGAAAATAGTTTTAGAAAATCTCATAT
TTTCATTTGTAACCTTGAACCTAGTCGAATAACACAGCGTAAGTTCTATTGCATTCTAAT
AGTGTTGCATTTTAACGCGTAGCGGTGCCACAACTGCTGCATTCTTCGCCTTAGATTTGG
TTTCAAATTAGACGGTAGAATCTTTTAACCCACTCCTAAAATATGCTTTTAATTCCGAGT
TGAATGTAACGATTTGTACATAAATAAATAAAGTACCGGCCTTATAA
| ProSiteProfiles |
Small_GTPase_Ras (IPR020849) - T[11-196] 45.031 |
| PANTHER |
Small_GTPase_Ras (IPR020849) - T[13-196] 2.4E-104 |
| TIGRFAM |
Small_GTP-bd_dom (IPR005225) - T[13-169] 8.7E-33 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[14-176] 4.76E-53 |
| Pfam |
Small_GTPase (IPR001806) - T[17-177] 2.2E-57 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RAP1B_HUMAN | 82.778 % | 313 | 9.83E-111 |
| RAP1A_HUMAN | 84.118 % | 301 | 6.83E-106 |
| RP1BL_HUMAN | 81.667 % | 308 | 9.3E-109 |