- Transcript 'KH2012:KH.C14.583.v1...' >
- Transcript 'KH2012:KH.C11.685.v1...' >
- Transcript 'KH2012:KH.C11.648.v1...' >
- Transcript 'KH2012:KH.C5.130.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.130.v1.A.nonSL2-2
Possible name(s)
ZNF235; ZNF45; ZNF568
Gene model
Location
KhC5 [1,386,583 / 1,396,217]
Amino acid sequence
Length: 874
>KH.C5.130.v1.A.nonSL2-2
RRNKNPVTSTILSALVVARPYPTQTYLSLYGRLKVLYVKEFLSMEESKKYETHNTKQDIN
IWMNGFQSDKEMNFNTSEDKMIQITLLQPEGKLPTFDGILFDEPTNNDNSSTCLKQQKDL
DMKGTDFEIQCILNADDRPSSNPLQQELQTTHDVSKGKCKNEVKNQRQVSNLAKSSDPKV
FPCIRKEWFTNQLNIDKLNIIEQSKEIDTSTLAADMRAYLRSVNISLDNFAKNYLLRSQG
TLSDLLNHPKPWHGLSSRGRDIYMKMIEFLSAENLNELVAVLKQATVAVRPGPAIQNIPS
DVMDLLKEGKMPTQPRIVEVAAQFNIHVEYLQQYCEEQSNKQLALKKDKEHGTKTKHSTE
LMETGNNIKHRRHKDKRICPQLNCGVVLGSKVALDNHMLTHTGERPFKCEICGKGFTTHS
NVLSHQRRHNNSNSSNKISKRARKVAMMQDVTDIDDSEVESTEISKSAPSNKESCDLDVK
PSAPSAIIIDYEEYSEFDTKLSESTQLTSYCCPLCKKSSFKSLSSLTAHVRRHNAKQPYV
CDVCGKRFNSKFNATRHERTHTGVKPFKCPICPSRFTEAGSITAHLRTHTGEKPFQCQFC
GKSFSQKGPLQTHLLLHNGSRPYLCEICGKSFNQKTNLKAHEARHSGLKHHACTVCAMSF
QYKSDLHRHMLKHSGDRPYQCRLCSFTFTRLQYLRDHMHKIHDELSLKSDDEDELKCDED
KDGFDVMEHQHPDSNLEELPVLSTNDGASNNPISTTSYIMEVNPTNSDDKLDSSDCISSC
LTSISSAMANDNDPSLSSSNINTSNDTMHAVAIMTDHGLMFTNNTTVDLLELSKLDNDVE
VNRSDHSDIQSVFVTPTNDETRYVVVNISRENFL
Nucleotide sequence
Length: 2,766
>KH2012:KH.C5.130.v1.A.nonSL2-2
ATAATTGTTTGTTATCGTGCGGATGAGATTTTGTACGCGGATATGTAAAATGATTTAGAG
ACGTAACAAAAATCCGGTTACCTCCACAATACTCAGTGCACTAGTTGTGGCTCGGCCTTA
CCCCACCCAAACTTACCTTTCCCTTTACGGACGATTGAAAGTACTATACGTGAAAGAGTT
TTTAAGCATGGAAGAAAGCAAAAAATATGAAACACACAACACCAAGCAAGACATTAACAT
TTGGATGAATGGTTTTCAATCAGACAAAGAAATGAATTTCAACACATCTGAAGATAAAAT
GATTCAAATTACATTACTACAACCTGAGGGGAAGCTTCCTACCTTTGACGGTATTTTATT
TGATGAGCCAACTAACAACGATAACTCCAGCACATGTTTGAAGCAGCAGAAGGACCTTGA
TATGAAAGGAACAGATTTTGAGATTCAGTGTATTTTAAATGCAGATGACCGTCCCTCCTC
CAACCCTCTTCAACAAGAACTTCAAACAACCCATGATGTATCAAAAGGAAAATGTAAAAA
CGAAGTAAAAAATCAAAGGCAAGTATCAAACTTAGCAAAATCGAGCGATCCCAAGGTCTT
CCCATGCATTAGGAAGGAATGGTTCACCAACCAACTTAACATAGATAAGTTGAACATAAT
CGAGCAATCAAAGGAGATAGACACATCCACGCTTGCTGCAGACATGAGGGCATATTTACG
AAGTGTCAATATTTCTTTGGATAACTTTGCAAAGAATTATTTACTGCGGTCACAGGGAAC
ACTCAGTGATTTATTGAACCATCCCAAACCATGGCATGGTCTATCATCTCGTGGAAGGGA
TATTTACATGAAGATGATTGAATTTCTATCAGCTGAAAACTTGAATGAGTTGGTTGCTGT
GTTAAAGCAAGCTACAGTTGCAGTACGTCCTGGTCCTGCCATACAGAACATACCAAGTGA
CGTAATGGATTTATTAAAAGAAGGAAAGATGCCAACCCAACCAAGGATAGTGGAGGTTGC
TGCTCAGTTTAATATTCATGTGGAATATTTACAACAATATTGTGAGGAACAAAGTAATAA
ACAACTTGCTCTTAAGAAAGACAAAGAACATGGTACAAAAACTAAACACTCCACTGAACT
AATGGAAACCGGTAATAATATAAAACATCGTCGACATAAAGATAAAAGAATCTGCCCCCA
ACTTAATTGTGGAGTTGTACTTGGGTCAAAAGTTGCATTGGATAATCATATGCTTACACA
TACAGGGGAACGTCCGTTTAAATGTGAAATATGTGGAAAAGGGTTTACCACGCACTCTAA
TGTTTTATCACACCAAAGAAGACACAATAATTCAAATTCATCAAATAAAATCAGTAAAAG
AGCAAGAAAGGTAGCAATGATGCAAGATGTGACAGATATTGATGACTCTGAGGTTGAATC
AACTGAAATTTCAAAATCTGCACCAAGCAACAAAGAAAGTTGTGATTTGGATGTCAAGCC
AAGTGCGCCAAGTGCCATCATCATTGATTATGAAGAATATTCAGAGTTCGATACAAAATT
ATCGGAATCAACTCAACTTACATCATATTGTTGCCCGTTGTGCAAGAAATCAAGTTTTAA
ATCACTTTCCTCTCTAACAGCTCATGTTCGACGACACAACGCAAAGCAGCCGTATGTTTG
TGATGTTTGTGGAAAAAGATTCAACAGTAAGTTCAACGCAACAAGACACGAACGAACGCA
CACGGGTGTTAAGCCATTCAAATGTCCAATTTGTCCGAGTAGATTTACTGAAGCAGGTTC
CATTACTGCTCATTTACGAACACACACTGGAGAAAAACCTTTTCAATGTCAATTTTGTGG
AAAAAGTTTCAGCCAGAAGGGTCCATTACAAACCCACTTATTACTTCATAATGGAAGTCG
ACCTTACTTGTGCGAAATATGTGGAAAATCATTCAACCAGAAAACGAACCTTAAAGCTCA
CGAAGCGCGACATAGTGGATTGAAACATCACGCATGCACAGTTTGCGCAATGTCATTTCA
ATATAAAAGTGATTTACATCGTCATATGTTAAAACACAGTGGTGATCGACCTTACCAATG
TAGATTATGTTCATTCACTTTCACTAGGTTGCAATATCTCAGGGACCACATGCACAAAAT
ACATGATGAACTAAGCTTAAAATCTGATGATGAAGATGAGTTGAAATGTGATGAAGACAA
AGATGGTTTTGATGTGATGGAACATCAGCACCCTGATAGTAACTTGGAAGAGCTACCTGT
ATTATCTACCAATGATGGAGCGTCAAATAATCCAATTTCAACAACAAGTTACATTATGGA
AGTTAACCCGACAAACAGCGATGATAAATTGGACAGCAGTGACTGCATATCCTCATGTTT
AACATCTATATCAAGTGCAATGGCTAATGATAACGATCCATCTTTATCTTCATCGAATAT
CAACACATCTAATGACACCATGCATGCTGTGGCTATAATGACAGACCATGGTCTTATGTT
TACCAACAATACAACTGTTGATCTGCTTGAACTGAGCAAGTTAGACAATGATGTAGAAGT
TAATCGCTCTGATCACTCCGACATACAATCAGTGTTCGTTACCCCAACAAATGATGAGAC
TCGTTATGTTGTGGTTAATATTAGCAGGGAAAATTTTTTATAATATGTTTTTTGTTTGAA
GCCAATTTACATGGTCTTTTGGTGCGCTGGTCAGTAAATTGCTTTCGTTTAGTAATATGC
TAATGC
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[183-284] 1.04E-26 |
| ProSiteProfiles |
CUT_dom (IPR003350) - T[198-285] 22.319 |
| SMART |
CUT_dom (IPR003350) - T[199-285] 8.4E-33 |
| Pfam |
CUT_dom (IPR003350) - T[204-275] 1.3E-21 |
| SMART |
Znf_C2H2_type (IPR013087) - T[377-401] 0.63 - T[407-429] 9.0E-4 - T[510-533] 0.26 - T[539-561] 0.0013 - T[567-589] 0.005 - T[595-617] 6.1E-4 - T[623-645] 0.0015 - T[651-673] 0.065 - T[679-702] 0.0055 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[377-406] 11.261 - T[407-434] 13.006 - T[539-566] 15.209 - T[567-594] 14.648 - T[595-622] 14.835 - T[623-650] 13.9 - T[651-678] 13.318 - T[679-702] 9.723 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[379-401] . - T[409-429] . - T[541-561] . - T[569-589] . - T[597-617] . - T[625-645] . - T[653-673] . - T[681-702] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[381-429] 5.83E-13 - T[519-576] 7.18E-18 - T[576-632] 1.79E-19 - T[617-669] 2.83E-14 - T[659-703] 5.07E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN568_HUMAN | 35.475 % | 202 | 3.61E-55 |
| ZNF45_HUMAN | 34.971 % | 204 | 1.07E-55 |
| ZN235_HUMAN | 33.146 % | 204 | 2.35E-55 |