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- Transcript 'KH2012:KH.C11.535.v1...' >
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- Transcript 'KH2012:KH.C5.130.v2....'
Transcript Model
Transcript Id
KH2012:KH.C5.130.v2.R.SL1-1
Possible name(s)
ZNF235; ZNF45; ZNF568
Gene model
Location
KhC5 [1,386,549 / 1,395,490]
Amino acid sequence
Length: 762
>KH.C5.130.v2.R.SL1-1
RRNKNPVTSTILSALVVARPYPTQTYLSLYGRLKVLYVKEFLSMEESKKYETHNTKQDIN
IWMNGFQSDKEMNFNTSEDKMIQITLLQPEGKLPTFDGILFDEPTNNDNSSTCLKQQKDL
DMKGTDFEIQCILNADDRPSSNPLQQELQTTHDVSKGKCKNEVKNQRQVSNLAKSSDPKV
FPCIRKEWFTNQLNIDKLNIIEQSKEIDTSTLAADMRAYLRSVNISLDNFAKNYLLRSQG
TLSDLLNHPKPWHGLSSRGRDIYMKMIEFLSAENLNELVAVLKQATVAVRPGPAIQNIPS
DVMDLLKEGKMPTQPRIVEVAAQFNIHVEYLQQYCEEQSNKQLALKKDKEHGTKTKHSTE
LMETGNNIKHRRHKDKRICPQLNCGVVLGSKVALDNHMLTHTGERPFKCEICGKGFTTHS
NVLSHQRRHNNSNSSNKISKRARKVAMMQDVTDIDDSEVESTEISKSAPSNKESCDLDVK
PSAPSAIIIDYEEYSEFDTKLSESTQLTSYCCPLCKKSSFKSLSSLTAHVRRHNAKQPYV
CDVCGKRFNSKFNATRHERTHTGVKPFKCPICPSRFTEAGSITAHLRTHTGEKPFQCQFC
GKSFSQKGPLQTHLLLHNGSRPYLCEICGKSFNQKTNLKAHEARHSGLKHHACTVCAMSF
QYKSDLHRHMLKHSGDRPYQCRLCSFTFTRLQYLRDHMHKIHDELSLKSDDEDELKCDED
KDGFDVMEHQHPDSNLEELPVLSTNDGASNNPISTTSYIMEG
Nucleotide sequence
Length: 2,505
>KH2012:KH.C5.130.v2.R.SL1-1
ATTTAAATAGTCAGCCATAAGAATTTTTGATTTCATAATTGTTTGTTATCGTGCGGATGA
GATTTTGTACGCGGATATGTAAAATGATTTAGAGACGTAACAAAAATCCGGTTACCTCCA
CAATACTCAGTGCACTAGTTGTGGCTCGGCCTTACCCCACCCAAACTTACCTTTCCCTTT
ACGGACGATTGAAAGTACTATACGTGAAAGAGTTTTTAAGCATGGAAGAAAGCAAAAAAT
ATGAAACACACAACACCAAGCAAGACATTAACATTTGGATGAATGGTTTTCAATCAGACA
AAGAAATGAATTTCAACACATCTGAAGATAAAATGATTCAAATTACATTACTACAACCTG
AGGGGAAGCTTCCTACCTTTGACGGTATTTTATTTGATGAGCCAACTAACAACGATAACT
CCAGCACATGTTTGAAGCAGCAGAAGGACCTTGATATGAAAGGAACAGATTTTGAGATTC
AGTGTATTTTAAATGCAGATGACCGTCCCTCCTCCAACCCTCTTCAACAAGAACTTCAAA
CAACCCATGATGTATCAAAAGGAAAATGTAAAAACGAAGTAAAAAATCAAAGGCAAGTAT
CAAACTTAGCAAAATCGAGCGATCCCAAGGTCTTCCCATGCATTAGGAAGGAATGGTTCA
CCAACCAACTTAACATAGATAAGTTGAACATAATCGAGCAATCAAAGGAGATAGACACAT
CCACGCTTGCTGCAGACATGAGGGCATATTTACGAAGTGTCAATATTTCTTTGGATAACT
TTGCAAAGAATTATTTACTGCGGTCACAGGGAACACTCAGTGATTTATTGAACCATCCCA
AACCATGGCATGGTCTATCATCTCGTGGAAGGGATATTTACATGAAGATGATTGAATTTC
TATCAGCTGAAAACTTGAATGAGTTGGTTGCTGTGTTAAAGCAAGCTACAGTTGCAGTAC
GTCCTGGTCCTGCCATACAGAACATACCAAGTGACGTAATGGATTTATTAAAAGAAGGAA
AGATGCCAACCCAACCAAGGATAGTGGAGGTTGCTGCTCAGTTTAATATTCATGTGGAAT
ATTTACAACAATATTGTGAGGAACAAAGTAATAAACAACTTGCTCTTAAGAAAGACAAAG
AACATGGTACAAAAACTAAACACTCCACTGAACTAATGGAAACCGGTAATAATATAAAAC
ATCGTCGACATAAAGATAAAAGAATCTGCCCCCAACTTAATTGTGGAGTTGTACTTGGGT
CAAAAGTTGCATTGGATAATCATATGCTTACACATACAGGGGAACGTCCGTTTAAATGTG
AAATATGTGGAAAAGGGTTTACCACGCACTCTAATGTTTTATCACACCAAAGAAGACACA
ATAATTCAAATTCATCAAATAAAATCAGTAAAAGAGCAAGAAAGGTAGCAATGATGCAAG
ATGTGACAGATATTGATGACTCTGAGGTTGAATCAACTGAAATTTCAAAATCTGCACCAA
GCAACAAAGAAAGTTGTGATTTGGATGTCAAGCCAAGTGCGCCAAGTGCCATCATCATTG
ATTATGAAGAATATTCAGAGTTCGATACAAAATTATCGGAATCAACTCAACTTACATCAT
ATTGTTGCCCGTTGTGCAAGAAATCAAGTTTTAAATCACTTTCCTCTCTAACAGCTCATG
TTCGACGACACAACGCAAAGCAGCCGTATGTTTGTGATGTTTGTGGAAAAAGATTCAACA
GTAAGTTCAACGCAACAAGACACGAACGAACGCACACGGGTGTTAAGCCATTCAAATGTC
CAATTTGTCCGAGTAGATTTACTGAAGCAGGTTCCATTACTGCTCATTTACGAACACACA
CTGGAGAAAAACCTTTTCAATGTCAATTTTGTGGAAAAAGTTTCAGCCAGAAGGGTCCAT
TACAAACCCACTTATTACTTCATAATGGAAGTCGACCTTACTTGTGCGAAATATGTGGAA
AATCATTCAACCAGAAAACGAACCTTAAAGCTCACGAAGCGCGACATAGTGGATTGAAAC
ATCACGCATGCACAGTTTGCGCAATGTCATTTCAATATAAAAGTGATTTACATCGTCATA
TGTTAAAACACAGTGGTGATCGACCTTACCAATGTAGATTATGTTCATTCACTTTCACTA
GGTTGCAATATCTCAGGGACCACATGCACAAAATACATGATGAACTAAGCTTAAAATCTG
ATGATGAAGATGAGTTGAAATGTGATGAAGACAAAGATGGTTTTGATGTGATGGAACATC
AGCACCCTGATAGTAACTTGGAAGAGCTACCTGTATTATCTACCAATGATGGAGCGTCAA
ATAATCCAATTTCAACAACAAGTTACATTATGGAAGGTTAGGTTATTTCTTATTGTTGTT
TTTATCCACTAAGTTACAATTGTGGTAACTCCTAAGTGGGTACAAGGTGTATGATTATGA
CTTCCATTGCCCAGTTACGCAAAGATAAAAGTTACAGTCATTTAT
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[183-284] 8.04E-27 |
| ProSiteProfiles |
CUT_dom (IPR003350) - T[198-285] 22.319 |
| SMART |
CUT_dom (IPR003350) - T[199-285] 8.4E-33 |
| Pfam |
CUT_dom (IPR003350) - T[204-275] 1.1E-21 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[377-406] 11.261 - T[407-434] 13.006 - T[539-566] 15.209 - T[567-594] 14.648 - T[595-622] 14.835 - T[623-650] 13.9 - T[651-678] 13.318 - T[679-702] 9.723 |
| SMART |
Znf_C2H2_type (IPR013087) - T[377-401] 0.63 - T[407-429] 9.0E-4 - T[510-533] 0.26 - T[539-561] 0.0013 - T[567-589] 0.005 - T[595-617] 6.1E-4 - T[623-645] 0.0015 - T[651-673] 0.065 - T[679-702] 0.0055 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[379-401] . - T[409-429] . - T[541-561] . - T[569-589] . - T[597-617] . - T[625-645] . - T[653-673] . - T[681-702] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[381-429] 4.91E-13 - T[519-576] 6.32E-18 - T[576-632] 1.26E-19 - T[617-669] 2.26E-14 - T[659-703] 4.04E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN568_HUMAN | 35.475 % | 200 | 3.2E-55 |
| ZNF45_HUMAN | 34.971 % | 202 | 1.47E-55 |
| ZN235_HUMAN | 34.043 % | 202 | 3.5E-55 |