- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C5.150.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.150.v1.A.SL3-1
Possible name(s)
FOXB1; FOXD4; FOXE1
Gene model
Location
KhC5 [276,043 / 279,377]
Amino acid sequence
Length: 588
>KH.C5.150.v1.A.SL3-1
IFGLSVNIGIMLTYYHEIHGVHHSSPHIHAKNPSNQRIPHDQPASFSSNHRYSHYPIQPG
HFEQGNPHSYLDRQYPNPSSYAPPVVKDASRNQQPFHSTPTCEPPRSEVAFTPCNPTYDE
LQRKDEATQQFTDIGRTDLQTPAEVEQTLLEIDDKVDLAESDETVTKLSECSVDDVTAVD
DESLDEKNRENVKTTMDCDVITTTSSGRRRKRPIQRGKPPYSYIALISMAIASSPERKLT
LGHIYKFIMERFPFYREQNKKWQNSIRHNLTLNDCFIKLPREPGKPGKGNYWTLDPAAED
MFDNGSFLRRRKRFKRSDTEKAFLSSYMHDQSAFTPTNALKQYSTHPHTPSNAYYGQPGV
VGGNYLQPIMHPGSAGAPVHQMMGHYGAPMTVSPNVTNARMFSIENIIGHPRPNENLPPE
VSEYSDNMRHDGLNSERDLLDREGTNNVDRSLQANTSSQSQPSPSSGLYGAMTSPSVRGI
ICNNESVSTCYAYHTPTTTNPHCYTGSTGSPYGVTSNQRLTSLPIKPSYHSAFANPVHHY
HSDVTNMTSLSTDFTSLQTPGQFNSLPSSTYRRPPANYGGFDKYIHTI
Nucleotide sequence
Length: 2,294
>KH2012:KH.C5.150.v1.A.SL3-1
CGCCAGACAAAAGACTAGGATTTTGAATTTTTGGTTTATCTGTTAATATTGGGATCATGT
TGACTTATTACCACGAGATACACGGAGTTCACCATTCATCCCCACACATTCATGCAAAGA
ATCCATCCAACCAGCGCATACCGCATGATCAACCAGCAAGCTTTAGTTCCAACCATCGTT
ACAGTCATTACCCGATCCAACCTGGCCACTTTGAGCAAGGCAACCCACACAGCTACCTAG
ACCGACAATATCCGAACCCATCTTCGTACGCACCACCTGTAGTTAAGGATGCTTCCCGCA
ACCAGCAGCCTTTTCATAGCACCCCGACCTGTGAACCTCCTCGCTCTGAAGTTGCTTTCA
CACCATGCAATCCAACATACGATGAACTGCAGCGTAAGGACGAGGCCACACAGCAGTTCA
CCGACATCGGACGCACCGATTTACAAACACCAGCCGAGGTGGAACAAACTTTACTGGAAA
TCGATGACAAGGTTGACTTGGCTGAAAGTGACGAAACTGTGACGAAACTAAGCGAGTGTA
GCGTTGATGATGTCACCGCTGTTGATGACGAAAGTTTGGATGAAAAGAATCGAGAGAATG
TGAAAACTACAATGGATTGTGACGTCATAACAACAACAAGTTCAGGGCGACGTCGAAAGC
GACCCATTCAACGAGGGAAACCACCTTATAGTTACATTGCGTTGATATCCATGGCAATAG
CAAGCTCACCAGAACGTAAACTCACGCTCGGTCATATTTACAAGTTTATTATGGAACGAT
TTCCATTCTACCGTGAGCAGAATAAGAAGTGGCAAAACTCGATTCGGCACAACTTGACTC
TCAATGATTGCTTCATTAAACTACCAAGAGAACCAGGGAAGCCGGGGAAAGGAAATTATT
GGACCCTTGACCCAGCGGCTGAGGATATGTTTGACAATGGTTCATTTCTACGTCGTCGAA
AGAGGTTTAAACGATCTGATACCGAAAAAGCTTTTTTGAGTTCCTACATGCACGACCAGA
GCGCTTTCACACCGACCAATGCTTTAAAGCAATATAGCACACACCCTCATACACCTTCTA
ATGCTTACTATGGCCAACCAGGGGTTGTTGGAGGTAATTACTTGCAACCGATTATGCACC
CTGGTAGTGCTGGAGCACCGGTCCATCAGATGATGGGGCATTACGGTGCTCCCATGACGG
TGTCACCGAATGTTACAAATGCGAGGATGTTTAGTATTGAAAATATCATCGGCCACCCAC
GGCCAAACGAAAACCTTCCACCAGAGGTTTCTGAATATTCAGACAATATGCGACACGATG
GTTTAAACTCAGAGCGAGATTTGCTTGATAGAGAAGGAACAAACAATGTCGACCGCAGTT
TACAAGCAAACACATCATCTCAAAGCCAACCGAGCCCTTCATCAGGTTTATACGGCGCAA
TGACGTCACCAAGCGTACGTGGTATCATCTGTAACAATGAAAGTGTTTCAACATGTTACG
CTTACCACACCCCTACCACCACCAACCCGCATTGTTATACCGGAAGTACTGGTAGTCCAT
ACGGCGTCACATCAAATCAAAGATTGACGTCACTTCCTATTAAACCAAGCTACCATAGTG
CATTTGCTAACCCGGTACATCATTACCATTCTGACGTCACAAATATGACGTCATTGTCTA
CAGACTTTACGTCACTTCAGACACCGGGCCAGTTTAACAGTTTACCAAGCAGTACATACA
GACGACCACCCGCTAACTATGGTGGATTTGATAAATACATCCACACAATATAGACAACCG
TAGATTATTTTTGCAAACATTCCGATGCAACGTTTCGGTGAACGACGTCACTTATTTCTA
ATGGTGTGAACACCGCTTCGTTTTTAAAGACACTAACGATTTCAACTTATTATGTCGTAA
TACATGGTTACGGCCTGAACGCACAATATATGTTAGTTGCTTAACTAACTTGTCGAAAAC
AAACGAATCACGCAACGTACTATTCAGTTATTTCAATATTTTGGACATGATCGAAATATC
ACAATCGCCGCCATTTTGTTTGTTCGGTCGATATTTTCGGATAACTGTTTTGCCAAAACT
ATTATCACATATCTTTTAAATTAAATATACTTGTAACAAAAATAATAGTTACTTTTAAAT
TTTGAAGTTTTGTAAAGAGTTGAACATTCTACAAATTAGAAATTTCATTTTTTAACTTTT
TTTTCCAAGGCTCCAGTTAATGCAACGTGTTATTTGTATCGACGGTAGAATTCGTATTTT
AAATATTTAAAGTT
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[216-317] 7.2E-45 |
| SMART |
Fork_head_dom (IPR001766) - T[216-306] 2.3E-59 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[218-231] . |
| CDD |
Fork_head_dom (IPR001766) - T[218-295] 8.48098E-49 |
| Pfam |
Fork_head_dom (IPR001766) - T[218-302] 7.9E-38 |
| PRINTS |
Fork_head_dom (IPR001766) - T[218-231] 2.5E-22 - T[239-256] 2.5E-22 - T[262-279] 2.5E-22 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[218-312] 1.41E-39 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[218-312] 40.344 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[262-268] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXE1_HUMAN | 67.808 % | 182 | 4.43E-52 |
| FOXB1_HUMAN | 56.25 % | 169 | 8.73E-48 |
| FOXD4_HUMAN | 71.569 % | 170 | 5.28E-47 |