- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Molecular Tool 'Hox3-MO (Ikuta 2010)' >
- Transcript 'KH2012:KH.C5.23.v7.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.23.v7.A.nonSL9-1
Possible name(s)
OGT; TMTC1; TMTC4
Gene model
Location
KhC5 [1,353,748 / 1,362,051]
Amino acid sequence
Length: 875
>KH.C5.23.v7.A.nonSL9-1
YARVIHKKGDLDVACKACYLKAIETQTNFAVAWSNLGCVFNSQGEIWLAIHHFEKAVKLD
PNFLDAYINLGNVLKEARIFDRAVAAYLRALNLSPNHAVVHGNLACVYYEQGLVDLAIDT
YKRAIELQPHFPDAYCNLANALKEKGKVGDAEECYNKALRLCPTHADSLNNLANIKREQG
LIEEAIALYSKALEVFPEFAAAHSNLASVLQQQGKLQEALLHYKEAIRISPTFADAYSNM
GNTLKEMQDVQGAIQCYTRAIQINPAFADAHSNLASVHKDSGSIPAAIQSYRTALKLKPD
FPDAYCNLAHCLQIICDWSDYDERMKKLVSIVSDQLSKNRLPSVHPHHSMLYPLTHDFRK
AIAARHGALCLDKINILHKPAYDHPRSLAPTNGKLRIGYVSSDFGNHPTSHLMQSIPGVH
DLSKVEVFCYALSPDDNTNFRKKVSNEVANFVDLSQIQCNGKAADRIHQDGIHILLNMNG
YTKGARNELFSLRPAPIQAMWLGYPGTSGATFMDYIISDAVTSPLELRDQYSEKLAYMPN
TFFIGDHAQMFPHLKEKAVIDVKGAGDGDVSDNCCVLNSTDMKDTLDWFGGISYLSSKVK
DEEDKEVVTPVVPLNKSAHNICSMIKNSQLTVQLDESHTAQNGLALVQIDAKAATGEKPP
SGIIVSSRSQYRLPNNAIVFCNFNQLYKIDPSTLIMWCNILKRVPNSVLWLLRFPAVGEA
NVKKFARQTCGINANRIIFSPVAPKEEHVRRGQLADICLDTPLCNGHTTAMDVLWAGCPM
VTLPKETLASRVASSQLACLGCPELIAENSQQYEDIAVRLGTDMDYLKSVRAKVWHRRST
SPLFNVKRYVSDLEKLLFKMWRKYENGEDPNHISE
Nucleotide sequence
Length: 3,681
>KH2012:KH.C5.23.v7.A.nonSL9-1
AAAAGGTGGGTCTGTGTAAAATATGTATTCTCAAATTAGTAAAGAAGACGCCGTAAAGAA
AGTAATTATGAACAATCAACAACAGTCAACTGTGCACGATGCTGCAGCGTTAGGTGAACT
AGCTCATCGTGAATATCAATCTGGTGATTACGAAAATGCTGAAAGACACTGCATGCAGTT
ATGGCAACAAGAACCAGATAATACCGGAGTTCTACTTCTTCTCAGCTCAATCCATTTCCA
ATGTCGAAGACTAGATAAATCTGCATACTTTTCGAAACATGCAATAAAAACCAACCCAAT
GTTGGCTGAAGCTTACTCAAATCTGGGTAACGTTTATAAAGAACGCGGACAATTGCAAGA
AGCTTTGGATCATTACAGACATGCTGTGAGGTTGAAACCAGATTTCATTGATGGTTACAT
CAACTTGGCAGCTGCGTTAGTCACTGCTGGTGATCTAGAAGGAGCTGTTCATGCTTACTT
CTCCGCTTTACAAATTAACCCTGAACTGTATTGTGTCAGGAGTGACTTAGGAAATCTACT
CAAAGCTTTAGGCCGTTTAGAAGAAGCAAAGCGCGCGCCAAAGGTTTCACTGAAGAGGCA
AGGAAGATGTGACCTTCGAACGACTTCATTTTTCTGCATAAGTTCTTCGCATAAGACCAC
GTTAGCCAGTCAGCGGTATAGTATGCACGGGTCATTCATAAAAAGGGAGATTTGGACGTA
GCTTGTAAAGCGTGTTACCTAAAAGCCATTGAAACACAAACCAATTTTGCCGTTGCTTGG
AGCAATCTTGGCTGTGTTTTCAACAGTCAAGGTGAAATATGGTTGGCAATTCATCATTTT
GAAAAGGCTGTGAAATTGGATCCCAATTTTCTGGATGCTTACATCAATCTTGGCAATGTG
CTAAAAGAAGCAAGAATATTTGACAGAGCCGTCGCTGCTTACTTGCGAGCATTAAATTTG
TCACCAAACCATGCTGTTGTCCATGGCAACCTTGCTTGTGTTTATTATGAACAAGGACTG
GTTGACCTGGCAATTGACACGTACAAGCGAGCAATTGAGCTACAACCCCACTTTCCAGAT
GCATATTGTAACCTTGCTAATGCTCTCAAAGAAAAAGGTAAAGTTGGTGATGCAGAGGAA
TGTTATAACAAGGCATTACGTTTATGCCCAACACATGCTGATTCACTCAACAATCTTGCC
AACATTAAACGGGAACAAGGTCTTATTGAAGAGGCAATCGCGTTGTACAGCAAAGCACTT
GAGGTATTTCCTGAGTTTGCTGCAGCTCATTCCAACCTTGCTAGTGTTCTACAACAACAA
GGAAAGCTACAAGAAGCTTTGTTACATTATAAAGAAGCAATTCGAATCAGCCCAACTTTT
GCAGATGCTTATTCTAACATGGGCAACACATTAAAGGAAATGCAAGATGTACAAGGGGCT
ATTCAGTGTTACACACGTGCGATCCAAATCAACCCAGCGTTTGCCGATGCACATAGCAAC
CTTGCATCTGTACATAAGGACAGTGGAAGCATTCCTGCTGCCATACAATCCTACAGAACT
GCTCTTAAACTCAAGCCAGACTTTCCTGATGCTTATTGTAATCTTGCACACTGTCTGCAG
ATAATATGTGATTGGAGTGATTATGATGAAAGAATGAAGAAGTTGGTTTCCATTGTATCC
GATCAATTATCAAAGAATCGTCTTCCATCAGTCCATCCACATCACTCCATGTTGTATCCA
CTCACACATGACTTCAGGAAGGCTATTGCTGCTAGACATGGAGCTCTTTGTCTTGACAAG
ATCAACATCCTTCATAAACCAGCATACGATCATCCTCGCTCTCTTGCACCCACTAATGGC
AAGCTCCGCATCGGATATGTAAGTTCGGACTTTGGCAACCATCCCACCTCCCATCTCATG
CAGAGCATTCCTGGTGTTCATGATCTATCTAAAGTTGAGGTCTTCTGCTATGCACTCAGC
CCAGATGACAACACAAACTTCAGGAAAAAGGTTTCCAATGAAGTCGCAAACTTTGTGGAT
TTATCGCAAATCCAATGTAATGGAAAGGCAGCGGATCGTATTCATCAAGATGGGATTCAC
ATCCTGCTTAATATGAATGGTTATACCAAGGGTGCAAGGAATGAGTTGTTCTCACTTAGA
CCCGCACCCATCCAAGCAATGTGGTTGGGTTACCCTGGTACAAGTGGCGCAACATTCATG
GATTACATCATATCTGATGCTGTGACATCACCATTAGAACTCCGTGATCAATACAGTGAA
AAGCTTGCATATATGCCGAACACTTTCTTTATTGGAGATCATGCACAGATGTTTCCCCAT
CTTAAGGAGAAAGCAGTGATAGATGTGAAGGGAGCTGGTGATGGTGACGTCAGTGATAAT
TGTTGTGTGCTTAACTCAACTGATATGAAGGACACACTTGATTGGTTTGGGGGAATCTCT
TATTTGAGTTCAAAAGTCAAAGATGAAGAAGATAAAGAGGTTGTTACACCAGTTGTTCCT
CTCAACAAATCTGCACATAACATATGCAGTATGATTAAGAACAGTCAACTTACTGTGCAA
CTTGATGAGTCACACACTGCACAGAATGGATTGGCACTTGTACAGATTGATGCAAAAGCA
GCCACCGGTGAGAAACCACCAAGTGGTATAATTGTGTCGAGCAGATCACAATATCGACTT
CCAAACAATGCCATTGTGTTTTGTAACTTCAACCAGTTGTACAAGATTGATCCTAGCACA
CTCATCATGTGGTGTAATATATTGAAGAGAGTTCCCAACAGTGTGTTGTGGCTTCTACGT
TTCCCTGCAGTTGGTGAAGCTAATGTGAAGAAGTTTGCACGGCAGACTTGTGGTATCAAT
GCTAACAGGATTATATTTTCACCTGTTGCACCCAAGGAAGAACATGTAAGACGAGGTCAA
CTAGCGGATATATGTCTTGATACACCTTTGTGTAATGGTCATACTACAGCAATGGATGTT
TTATGGGCTGGTTGTCCCATGGTCACTTTACCCAAAGAAACTTTAGCGAGTCGTGTTGCC
TCCTCGCAACTTGCATGTCTTGGATGTCCGGAACTTATTGCTGAGAATTCACAACAATAT
GAGGATATTGCTGTAAGACTGGGCACCGATATGGATTATTTAAAATCTGTGCGTGCAAAA
GTGTGGCACAGACGAAGCACCAGTCCCCTGTTTAATGTTAAACGTTATGTGTCCGACCTG
GAGAAACTTCTATTTAAGATGTGGCGCAAATATGAGAATGGTGAAGACCCCAACCATATA
AGCGAGTAGAGGGTTGGAACTTAAAAAACGTGAACGCGAATGACGCGTGACGCTTATCAC
GCGATGATGTACATTTTCACACTTCGTGTACAGGCCGCTGTTTTGTCGCACGGTGGCGTA
AGAGCGCTCCGAGCGGTCTCAATCGGAGCAACACAGCGCAAACTTTCTTATTTTAATCAG
TTTTACATTCTATGTGCAACACCCATCAACGAATTGCGATGCATGCCAATATTTGGTGTC
TTTCGTTTTGGTGAAAATAAAACAATGACGTCAGCTGAGCTTTACTTACGTGCCCATATT
TAATAGTTGGTGTGACTTCCACTGGAGTCCCAAGTTGTATTAGAATAATTTACACTGAAT
AAATTTGCTGCGAATGTACAA
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[1-249] 5.8E-88 - T[268-378] 8.0E-36 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[4-198] 3.41E-49 - T[209-412] 6.32E-60 - T[504-543] 6.32E-60 - T[664-753] 6.32E-60 |
| PANTHER |
OGT (IPR037919) - T[15-874] 0.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[30-335] 76.598 |
| SMART |
TPR_repeat (IPR019734) - T[30-63] 8.2E-7 - T[64-97] 3.9E-4 - T[98-131] 1.8E-6 - T[132-165] 3.5E-8 - T[166-199] 3.3E-6 - T[200-233] 1.8E-6 - T[234-267] 5.5E-7 - T[268-301] 2.2E-4 |
| Pfam |
TPR_1 (IPR001440) - T[30-63] 1.7E-8 - T[234-266] 2.0E-8 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[30-63] 11.594 - T[64-97] 11.151 - T[98-131] 10.266 - T[132-165] 10.001 - T[166-199] 9.44 - T[200-233] 10.325 - T[234-267] 11.358 - T[268-301] 10.03 |
| Pfam |
TPR_repeat (IPR019734) - T[65-97] 0.023 |
| Pfam |
OGT/SEC/SPY_C (IPR029489) - T[395-861] 1.7E-244 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OGT1_HUMAN | 77.153 % | 1410 | 0 |
| TMTC1_HUMAN | 27.815 % | 113 | 1.61E-25 |
| TMTC4_HUMAN | 40.164 % | 92.4 | 3.58E-19 |