Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.286.v1.A.nonSL9-1

Possible name(s)

ATP5F1D

Gene model

KH2012:KH.C5.286

Location

KhC5 [3,401,702 / 3,403,115]

Sequences

Amino acid sequence

Length: 184

>KH.C5.286.v1.A.nonSL9-1
SLNCLAFLQSNTMSSVVLRLCSRTARAVTRVAAFKPQHRNYAEAAAAVAQPGQMLFTFAA
PAEAYYESSTAVRQVDVSTSTGSIGILANHVPTLGVLQPGVITVYETEGAVKKFFVSSGS
YCVNEDASVQINAEEAVPIEQLDKDLARANLTKAQSQLSSATTETGKVEAQIAIECNEAI
INAV

Nucleotide sequence

Length: 742

>KH2012:KH.C5.286.v1.A.nonSL9-1
AAAGTTTAAATTGTTTAGCATTCCTTCAAAGTAACACAATGTCTTCTGTTGTACTTCGAC
TCTGTTCGAGAACTGCCCGTGCAGTCACTCGCGTGGCAGCATTCAAACCACAGCATCGTA
ATTACGCCGAAGCAGCCGCCGCTGTAGCTCAACCCGGCCAGATGTTATTCACCTTCGCTG
CCCCTGCAGAGGCATATTATGAATCCAGCACAGCGGTGAGACAAGTTGATGTTTCGACCT
CCACCGGCTCCATTGGTATCCTTGCCAACCATGTTCCAACACTTGGTGTTCTTCAACCAG
GAGTAATTACCGTGTACGAAACAGAAGGAGCAGTCAAGAAATTTTTTGTGAGCAGTGGAT
CATATTGTGTCAATGAAGATGCCTCAGTTCAAATCAACGCTGAAGAAGCTGTTCCAATCG
AACAACTGGACAAAGATCTTGCAAGGGCCAATCTGACTAAAGCACAATCTCAATTGTCGA
GCGCAACGACTGAAACTGGCAAAGTTGAAGCCCAGATTGCAATTGAATGCAACGAGGCTA
TTATCAATGCTGTGTGATGCGTTGACAACAATTTATTTTAATACTTTACTTTCAAACTAA
AAGTCCCCTCTAGTTTCCCATGGTTCAAATTTTATTTATACATACAACGTGCTAAACAAT
TTACTCCAAATTCGTTCAATAAAAACAAATGTCAAAAACGTGTAAAATGAAACCAACAGT
GTAATAAAAATTAGAAAAACAA

InterProScan

PANTHER	ATP_synth_F1_dsu/esu (IPR001469) - T[29-183] 2.4E-41
Gene3D	ATPsynth_dsu/esu_N (IPR036771) - T[40-142] 4.1E-35
Hamap	ATP_synth_F1_dsu/esu (IPR001469) - T[52-183] 13.709
CDD	ATP_synth_F1_dsu/esu (IPR001469) - T[54-179] 3.58996E-32
SUPERFAMILY	ATPsynth_dsu/esu_N (IPR036771) - T[58-137] 6.54E-17
ProDom	ATP_synth_F1_dsu/esu_N (IPR020546) - T[59-142] 1.0E-20
Pfam	ATP_synth_F1_dsu/esu_N (IPR020546) - T[69-136] 1.5E-12
TIGRFAM	ATP_synth_F1_dsu/esu (IPR001469) - T[70-184] 1.8E-19
SUPERFAMILY	ATP_F1_dsu/esu_C_sf (IPR036794) - T[141-183] 7.85E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATPD_HUMAN	52.239 %	140	6.71E-43