Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.298.v2.A.SL2-2

Possible name(s)

NPM1; NPM3

Gene model

KH2012:KH.C5.298

Location

KhC5 [2,829,376 / 2,835,971]

Sequences

Amino acid sequence

Length: 316

>KH.C5.298.v2.A.SL2-2
LDKKTKVNQWEGRDDGMMEQLVLKRACIAPGAKEGERNLVEVTSFNHKQEKVEACICSLR
SGSQEDVALADLTIFPPAIFKLIQGNGPIHIVGNHMMMDDNDEDSEQDQDYFSEEEGSEL
SAEDSDVEEEQKPKGKVAAVTNGKDKKKEATKAEAKKDVKKVEVEEDDDEEMEDEDDDDL
MVEDEDDEEDEEEEEEEEVKPVPASKKRKLAQKEGNENKKPNEGSPQKKKKSPDSEPKTP
LQQKENKAPLSAKKTPKTPAKIYDTVDEVKDAIKKYPGGKPRKEDKFGNWVKSAFKVKND
EWIKELWKAHKKELGL

Nucleotide sequence

Length: 1,192

>KH2012:KH.C5.298.v2.A.SL2-2
TTGGACAAGAAAACCAAAGTCAACCAATGGGAAGGCAGAGATGATGGTATGATGGAACAA
CTTGTATTAAAAAGAGCATGCATTGCACCCGGGGCAAAGGAAGGCGAAAGAAACTTGGTT
GAAGTTACTTCGTTCAACCACAAGCAAGAGAAAGTTGAAGCTTGTATCTGTTCGTTACGA
AGTGGGTCGCAAGAAGATGTGGCTCTTGCTGATCTTACCATATTCCCACCAGCAATATTT
AAACTGATTCAAGGAAATGGACCAATTCATATTGTTGGAAACCACATGATGATGGATGAC
AACGATGAAGATTCTGAACAGGATCAGGATTATTTCTCGGAGGAGGAAGGATCGGAACTC
TCAGCGGAGGACAGTGATGTGGAAGAAGAACAAAAACCAAAAGGAAAAGTTGCCGCAGTC
ACGAATGGGAAGGATAAGAAAAAAGAAGCAACAAAAGCCGAGGCGAAAAAAGATGTGAAA
AAAGTTGAAGTTGAGGAAGACGATGATGAAGAGATGGAGGATGAAGATGATGATGATCTG
ATGGTAGAAGACGAAGATGATGAAGAGGACGAAGAAGAAGAAGAAGAAGAGGAAGTAAAA
CCTGTCCCTGCTTCTAAAAAGCGCAAACTTGCACAAAAAGAAGGGAATGAAAACAAGAAA
CCAAATGAAGGTTCGCCTCAAAAGAAAAAGAAAAGTCCGGATTCCGAACCAAAAACTCCC
CTGCAACAAAAAGAGAACAAAGCACCCCTGAGTGCAAAGAAAACGCCAAAAACCCCAGCT
AAAATATACGATACTGTCGACGAAGTAAAAGACGCGATCAAAAAGTACCCTGGTGGAAAA
CCTAGAAAAGAAGACAAGTTTGGTAACTGGGTTAAATCTGCATTTAAAGTGAAAAATGAC
GAGTGGATTAAAGAGCTGTGGAAAGCCCACAAAAAGGAACTTGGCTTATAAACAGTCACA
AGCGTCTCGAAACTCACTGCCCGCTTTTTACTTTTTAAACCAACATCGTGGCCACGATCT
ATGTCGTCACCAATAATGTACAAACAAATAATAATCAAAAACCTTTTCTCTCTCAATCGA
TGCGTTCATTTTTCAACTTCGTGCATTTCGTTTTTTTTAATTGGCGCCATCGTTTGCGAC
AATACACCACATTCTGTTTAAATAACAACATGTAACCTTCGTTCTGTAGTCA

InterProScan

PANTHER	Nucleoplasmin (IPR004301) - T[1-156] 1.6E-100 - T[160-315] 1.6E-100
Pfam	Nucleoplasmin_core_dom (IPR024057) - T[1-97] 6.3E-26
SUPERFAMILY	Nucleoplasmin_core_dom_sf (IPR036824) - T[1-97] 3.14E-21
Gene3D	NPM1_C_sf (IPR038101) - T[264-312] 2.0E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value