Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.298.v6.A.nonSL3-2

Possible name(s)

NPM1; NPM3

Gene model

KH2012:KH.C5.298

Location

KhC5 [2,829,376 / 2,836,095]

Sequences

Amino acid sequence

Length: 334

>KH.C5.298.v6.A.nonSL3-2
SYNMDLPDTSKEYFWCAKLDKKTKVNQWEGRDDGMMEQLVLKRACIAPGAKEGERNLVEV
TSFNHKQEKVEACICSLRSGSQEDVALADLTIFPPAIFKLIQGNGPIHIVGNHMMMDDND
EDSEQDQDYFSEEEGSELSAEDSDVEEEQKPKGKVAAVTNGKDKKKEATKAEAKKDVKKV
EVEEDDDEEMEDEDDDDLMVEDEDDEEDEEEEEEEEVKPVPASKKRKLAQKEGNENKKPN
EGSPQKKKKSPDSEPKTPLQQKENKAPLSAKKTPKTPAKIYDTVDEVKDAIKKYPGGKPR
KEDKFGNWVKSAFKVKNDEWIKELWKAHKKELGL

Nucleotide sequence

Length: 1,246

>KH2012:KH.C5.298.v6.A.nonSL3-2
TCATATAACATGGATCTTCCAGACACAAGCAAGGAGTATTTCTGGTGCGCAAAGTTGGAC
AAGAAAACCAAAGTCAACCAATGGGAAGGCAGAGATGATGGTATGATGGAACAACTTGTA
TTAAAAAGAGCATGCATTGCACCCGGGGCAAAGGAAGGCGAAAGAAACTTGGTTGAAGTT
ACTTCGTTCAACCACAAGCAAGAGAAAGTTGAAGCTTGTATCTGTTCGTTACGAAGTGGG
TCGCAAGAAGATGTGGCTCTTGCTGATCTTACCATATTCCCACCAGCAATATTTAAACTG
ATTCAAGGAAATGGACCAATTCATATTGTTGGAAACCACATGATGATGGATGACAACGAT
GAAGATTCTGAACAGGATCAGGATTATTTCTCGGAGGAGGAAGGATCGGAACTCTCAGCG
GAGGACAGTGATGTGGAAGAAGAACAAAAACCAAAAGGAAAAGTTGCCGCAGTCACGAAT
GGGAAGGATAAGAAAAAAGAAGCAACAAAAGCCGAGGCGAAAAAAGATGTGAAAAAAGTT
GAAGTTGAGGAAGACGATGATGAAGAGATGGAGGATGAAGATGATGATGATCTGATGGTA
GAAGACGAAGATGATGAAGAGGACGAAGAAGAAGAAGAAGAAGAGGAAGTAAAACCTGTC
CCTGCTTCTAAAAAGCGCAAACTTGCACAAAAAGAAGGGAATGAAAACAAGAAACCAAAT
GAAGGTTCGCCTCAAAAGAAAAAGAAAAGTCCGGATTCCGAACCAAAAACTCCCCTGCAA
CAAAAAGAGAACAAAGCACCCCTGAGTGCAAAGAAAACGCCAAAAACCCCAGCTAAAATA
TACGATACTGTCGACGAAGTAAAAGACGCGATCAAAAAGTACCCTGGTGGAAAACCTAGA
AAAGAAGACAAGTTTGGTAACTGGGTTAAATCTGCATTTAAAGTGAAAAATGACGAGTGG
ATTAAAGAGCTGTGGAAAGCCCACAAAAAGGAACTTGGCTTATAAACAGTCACAAGCGTC
TCGAAACTCACTGCCCGCTTTTTACTTTTTAAACCAACATCGTGGCCACGATCTATGTCG
TCACCAATAATGTACAAACAAATAATAATCAAAAACCTTTTCTCTCTCAATCGATGCGTT
CATTTTTCAACTTCGTGCATTTCGTTTTTTTTAATTGGCGCCATCGTTTGCGACAATACA
CCACATTCTGTTTAAATAACAACATGTAACCTTCGTTCTGTAGTCA

InterProScan

PANTHER	Nucleoplasmin (IPR004301) - T[6-174] 1.3E-108 - T[178-333] 1.3E-108
SUPERFAMILY	Nucleoplasmin_core_dom_sf (IPR036824) - T[10-115] 1.96E-24
Pfam	Nucleoplasmin_core_dom (IPR024057) - T[13-115] 4.3E-29
Gene3D	NPM1_C_sf (IPR038101) - T[282-330] 2.2E-7

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value