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TRANSCRIPT CARD

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  1. Clone 'cien34183'
  2. Clone 'AHC0AAA9YK21'
  3. Transcript 'Cisavi.CG.ENS81.R489...'
  4. Clone 'ma340n11'
  5. Transcript 'KH2012:KH.C5.358.v2....'

Transcript Model

Transcript Id

KH2012:KH.C5.358.v2.A.nonSL5-1

Possible name(s)

DMTF1; MYBL1; TTF1

Location

KhC5 [3,219,118 / 3,228,912]

Sequences

Amino acid sequence

Length: 446

>KH.C5.358.v2.A.nonSL5-1
YHNVYRGIMTSLINCELFQSASTESNRRRKAHPYKLKRKSVEKVHLAVQEQQQRHDATPC
IQYTSDLSSEIDETEKYLTNSCKKIKLDKRKQEQETVSQSSTQTTNIETTETVFATPTFE
VVRGECDDQLVLTLLPVSQAQSVSHCAANNNAVTVPEPQLTLEIDEGFKPKKRRAVTANK
KLLSSVESDPVRNIWITAKLHKEQLKDSGHTWTTGMWSKAEVQVLEQNIERYCQERRIKN
PEEIIFESSKDDRKDFYPYIAAGLNRPLFAVYRRVKRMYDKKNHKGKYSSEELATLRELY
EQHGEKWGVIAQKMGRSSDSVKDRCRLLRPGQDEIRIGKWTNHEEDMLTMAVHYVTQTQV
GEAVSKGITWNLVARIVQTRSEKQCRAKWLNYLNWKLRSGEEWSRMDNKLLVDRVAELGA
KSENEINWSALSDGWKSPRSPQCLXL

Nucleotide sequence

Length: 2,659

>KH2012:KH.C5.358.v2.A.nonSL5-1
GTGGTTTTGTAAGTAGTTGTTGATGTGTTTGTGTAGATTAAAAATAGCGATTCCTTATCT
ATGAGGGTTTTCTTCCAATAGTAGTACCACAACGTCTACAGAGGAATTATGACAAGTCTT
ATAAATTGCGAGTTGTTTCAAAGCGCATCTACCGAATCAAACAGACGACGTAAAGCACAC
CCTTACAAGTTGAAACGGAAATCAGTTGAAAAAGTTCACTTGGCTGTGCAAGAACAACAA
CAACGACATGATGCAACACCATGTATTCAATACACAAGCGATCTCAGCAGTGAAATTGAC
GAAACGGAGAAATACTTGACCAATTCTTGCAAAAAAATTAAGCTGGATAAACGTAAACAG
GAACAAGAAACTGTTTCGCAATCGAGCACGCAAACAACAAACATAGAAACCACAGAAACA
GTGTTTGCTACCCCTACATTTGAAGTTGTCCGCGGGGAATGTGATGACCAGCTGGTCCTC
ACTCTCTTACCTGTTTCCCAAGCTCAAAGTGTCTCTCATTGTGCGGCAAATAATAATGCA
GTAACAGTACCTGAACCACAATTGACACTTGAAATTGACGAAGGTTTCAAACCAAAAAAA
CGAAGAGCAGTAACTGCTAATAAAAAGCTTTTATCTTCCGTCGAAAGCGACCCTGTTCGA
AATATTTGGATCACAGCCAAGTTACACAAAGAACAACTGAAGGACAGCGGACACACGTGG
ACAACTGGTATGTGGAGTAAAGCAGAAGTACAAGTACTCGAGCAAAACATTGAAAGATAT
TGTCAGGAGCGAAGAATCAAAAATCCTGAAGAGATAATATTCGAAAGCAGTAAAGATGAC
AGGAAAGACTTCTATCCATACATTGCTGCTGGCCTCAATCGACCTCTATTTGCTGTGTAT
CGCAGAGTAAAGAGAATGTATGATAAAAAGAACCACAAGGGAAAATATTCCAGTGAGGAG
TTAGCCACACTACGCGAGTTATACGAACAACATGGGGAAAAGTGGGGAGTTATCGCACAG
AAGATGGGAAGAAGTTCAGATTCGGTAAAAGATCGGTGCCGTTTGCTAAGACCTGGTCAG
GATGAAATTCGTATTGGTAAATGGACAAACCATGAGGAAGACATGTTGACAATGGCTGTT
CACTACGTTACACAAACACAAGTTGGTGAAGCAGTTTCTAAAGGAATTACTTGGAACTTG
GTGGCAAGAATCGTTCAAACTCGGTCCGAAAAGCAATGCCGGGCGAAATGGTTGAATTAT
TTGAACTGGAAGTTAAGAAGTGGTGAAGAATGGTCGAGGATGGATAACAAACTTCTTGTA
GATCGAGTTGCTGAACTTGGTGCAAAGTCTGAGAATGAAATAAATTGGTCGGCTTTAAGT
GATGGTTGGAAAAGTCCCCGCTCACCACAATGTTTGCNATTGTAAGTGGTCGCATCTTAA
GAAACCACTGTCTGAATTTAACTTGGATAATCTGGATTTTCCTGAAAGTGTTCAGGTTCT
AAAATCCCTCTACTCTGAGCAAGCAATGAATATTTGTGACCGTCCACGCCAGTTAATTAA
ATCCATCATTACAAATAAATTTTCTCCGAAAAAACCGTTACCCAACTCCACAGAACGAGC
TCCTGTCACTGTAACTAATGAAGAAGGGAGCACCATATCGAGTAATGTATACGAGGAAAA
CTTATTCAAACACAACGACAACAACAATTTCCTTGCACCAAGCAACCCACCCCCACTCAA
CTCAATGCAACACAGTTTAAATGCAATTGTCCGACCAAGAACGGAATCTGAATCCATTTG
TAACCATCACAAGAATGACTTTGATTTATCAGAAAGTAACGTTCTGTTATGTGATACAAA
TGATGGGGCACTAACACTTGCGCAAGAAGTCTACCCCCTCAGTTCACCATCATCAGAAGG
TATTTACACCATTCAATCTCCTGATGGTGAAACTCAAGACTCAGAATCTGTTTCAACTGA
AAGTGGAATGGTTAACATTCTGACAATCCTTGAACTTAAAACTGATCCTAACACAAGTCA
TGAGGTGACAGTTCCTACATCTGGTGACAATGAGATAATTTTAACTTCAGGAGATACTGT
TTATTTTGCGCATTCCTCAAACCCAAATCAAATTTTGGGAAGTTCCACTTCATCTAGTAC
CTCCAGTTGCCATGACGATGGGATTGGACTTCTTTCTGATGCTTCTCAGCTCTCTGGAGT
AAACATCAATTTCTGAAAATCACTTTTATTTGCCAAAACCTGTCTCTTGTGTGGAATTAC
TATGTATTTGCTGTTATATACGTTAGCCATAACATCAAGCTGTTCCGTCGCAAAAATCCC
TGCAATCATGCACAAACATATTTTGATCAAGGCTTACTCTGCCGAATCAAAAACATACAC
TGAATGCATCCAACTTGGTGTAAAAAAACAACATTAAAACATGATTGAATTTGATGAAAT
AGTGTTTTTGTGTGAAGTTTACAATCTGCTGCCCGTATTACTGTGGTCGTGTGTTATTTA
TTTGTCTCCATTGTCAATTTTGTTGCTGAAGATTGTGGGCGTGATGGTATTACATTATAA
GTTGTAACTTGATGAAAATTCTTGTAACTTTATTACGAGCACAAGGTTTTAGCTAGCAAG
AATTACTGGCTCAATAAAA

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[265-329] 4.0E-8 - T[338-408] 1.6E-10
ProSiteProfiles
Myb-like_dom (IPR017877) - T[280-324] 6.551 - T[403-446] 4.635
SMART
SANT/Myb (IPR001005) - T[284-331] 1.1E-6 - T[336-395] 1.1E-7
Pfam
SANT/Myb (IPR001005) - T[285-327] 2.2E-7 - T[338-393] 1.1E-10
CDD
SANT/Myb (IPR001005) - T[287-328] 2.9627E-4 - T[339-393] 6.64028E-6
ProSiteProfiles
Myb_dom (IPR017930) - T[332-397] 11.686

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DMTF1_HUMAN 54.198 % 296 8.85E-93
TTF1_HUMAN 25.468 % 82 1.56E-16