Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.392.v1.A.nonSL12-1

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

KH2012:KH.C5.392

Location

KhC5 [1,537,456 / 1,542,155]

Sequences

Amino acid sequence

Length: 275

>KH.C5.392.v1.A.nonSL12-1
RILGILATPSWFDMGELQSVNMNIRKQLDLFANVVRVKSLPGITTRHGAIDIVVIREQTE
GEYSALEHESVPGVVESLKIITRVKSERIAKFAFDYATKHGRNKVTAVHKANIMKLADGM
FLDSCREVAKLYPKIKFEAMIVDNTCMQLASHPSQFDVMVMPNLYGNIIDNLAAGLVGGA
GVVPGESYSPDCVVFETGARHPFAQAVGRNIANPTAMLMCAANMLHHMNLVAHAKLVQDA
LLKVLRDGKIRTTDLKGYATTTEFTAAVINNLGKA

Nucleotide sequence

Length: 1,477

>KH2012:KH.C5.392.v1.A.nonSL12-1
TACATTTGACCGCTGTAGTGGTCATTAGTAAAAGATAAGTTCACATTACGTTGTAAAATC
TTAAGTTATTCGTTAAAATAATCCAGCAATATGACAACCCTGAGAAGTATGACTCGCCTG
CTACTAAAGTCCGTACCGGCAGCACACAAGATAGCTACGACTCGACGGTTTGTGCATGCA
TCGTTTCAGAATTTTGCTAAAAAACCTGCGGAAACTCAATCTGGAGAGAAATTGCGAGTC
ACCATGATTCCTGGGGATGGAGTTGGACCAGAATTAATGTATTCAGTGAAGGAAGTGTTC
ACAGCAGCTGATGTTCCAATCCAGTTTGAAGAATTTTGGGTATTCTTGCCACACCTTCTT
GGTTTGACATGGGAGAACTACAATCTGTTAACATGAACATAAGAAAACAGTTGGATTTGT
TTGCAAACGTTGTTCGTGTAAAAAGTTTACCTGGAATCACCACTCGACATGGAGCGATCG
ACATCGTGGTTATTCGGGAACAAACAGAAGGAGAATACAGCGCACTTGAGCACGAGAGTG
TACCTGGTGTGGTGGAATCTTTAAAAATCATAACCCGGGTAAAATCGGAGAGAATTGCTA
AATTTGCTTTTGATTATGCAACCAAGCATGGAAGGAACAAAGTTACAGCAGTTCATAAAG
CAAATATTATGAAACTTGCTGATGGAATGTTTCTTGATTCTTGCCGAGAAGTTGCCAAAC
TTTATCCTAAAATTAAGTTTGAAGCTATGATTGTAGATAACACTTGTATGCAACTTGCCT
CCCACCCTTCTCAATTTGACGTGATGGTAATGCCAAACTTGTACGGGAACATCATTGATA
ATTTGGCTGCAGGTCTCGTTGGAGGCGCTGGTGTGGTGCCGGGTGAAAGTTACAGCCCTG
ATTGTGTGGTGTTTGAAACTGGAGCTCGCCATCCATTTGCACAAGCTGTTGGACGTAACA
TAGCCAACCCCACTGCCATGCTAATGTGTGCTGCTAATATGTTGCATCATATGAATTTAG
TGGCGCACGCCAAACTTGTACAAGATGCACTTTTAAAAGTTCTTCGAGATGGAAAGATAC
GCACCACTGACTTGAAGGGTTATGCAACCACCACCGAATTCACAGCTGCAGTTATTAATA
ATTTAGGTAAAGCTTAAAACTCGCCAAGATTCCACACAAGTTTATTATTTATTTAATGTT
AGGCTGCTAGTTCCGTTTATTTTTTTCCCAAAGTTCAATAAAAAATATTTTGTTGTCAAA
TCTTTTATATGACGTCCCAGTTTACGTCATTGTATGACGTCAGAAGTACTGAAAGTTGTT
GTTGTGGCGTGCTCCCTACGTCCTAATAATATTTCCGTTTGAGAACGATTATTACGCAAT
AATTAAGTTAATGATGAAATTGTACCTTAAATAGCATCCACACATTTAGCTTTAATTAGG
GTTCAAATTACAAAGAAGTTCAATTCTCATACTTGAA

InterProScan

SMART	IsoPropMal-DH-like_dom (IPR024084) - T[1-268] 1.4E-99
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[2-268] 8.0E-63
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[163-182] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	56.863 %	291	9.23E-98
IDH3B_HUMAN	70.48 %	392	1.35E-137
IDH3A_HUMAN	47.2 %	238	2.77E-77