Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C5.392.v2.A.nonSL22-1

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

KH2012:KH.C5.392

Location

KhC5 [1,537,456 / 1,542,130]

Sequences

Amino acid sequence

Length: 386

>KH.C5.392.v2.A.nonSL22-1
SSNMTTLRSMTRLLLKSVPAAHKIATTRRFVHASFQNFAKKPAETQSGEKLRVTMIPGDG
VGPELMYSVKEVFTAADVPIQFEEFWVSEVQDRCSDEQIAELIHSVAKNKVALKGILATP
SWFDMGELQSVNMNIRKQLDLFANVVRVKSLPGITTRHGAIDIVVIREQTEGEYSALEHE
SVPGVVESLKIITRVKSERIAKFAFDYATKHGRNKVTAVHKANIMKLADGMFLDSCREVA
KLYPKIKFEAMIVDNTCMQLASHPSQFDVMVMPNLYGNIIDNLAAGLVGGAGVVPGESYS
PDCVVFETGARHPFAQAVGRNIANPTAMLMCAANMLHHMNLVAHAKLVQDALLKVLRDGK
IRTTDLKGYATTTEFTAAVINNLGKA

Nucleotide sequence

Length: 1,537

>KH2012:KH.C5.392.v2.A.nonSL22-1
TAGTAAAAGATAAGTTCACATTACGTTGTAAAATCTTAAGTTATTCGTTAAAATAATCCA
GCAATATGACAACCCTGAGAAGTATGACTCGCCTGCTACTAAAGTCCGTACCGGCAGCAC
ACAAGATAGCTACGACTCGACGGTTTGTGCATGCATCGTTTCAGAATTTTGCTAAAAAAC
CTGCGGAAACTCAATCTGGAGAGAAATTGCGAGTCACCATGATTCCTGGGGATGGAGTTG
GACCAGAATTAATGTATTCAGTGAAGGAAGTGTTCACAGCAGCTGATGTTCCAATCCAGT
TTGAAGAATTTTGGGTAAGTGAGGTTCAAGACCGATGTTCTGATGAACAGATTGCAGAAC
TTATTCATTCCGTTGCTAAAAACAAAGTTGCACTTAAAGGTATTCTTGCCACACCTTCTT
GGTTTGACATGGGAGAACTACAATCTGTTAACATGAACATAAGAAAACAGTTGGATTTGT
TTGCAAACGTTGTTCGTGTAAAAAGTTTACCTGGAATCACCACTCGACATGGAGCGATCG
ACATCGTGGTTATTCGGGAACAAACAGAAGGAGAATACAGCGCACTTGAGCACGAGAGTG
TACCTGGTGTGGTGGAATCTTTAAAAATCATAACCCGGGTAAAATCGGAGAGAATTGCTA
AATTTGCTTTTGATTATGCAACCAAGCATGGAAGGAACAAAGTTACAGCAGTTCATAAAG
CAAATATTATGAAACTTGCTGATGGAATGTTTCTTGATTCTTGCCGAGAAGTTGCCAAAC
TTTATCCTAAAATTAAGTTTGAAGCTATGATTGTAGATAACACTTGTATGCAACTTGCCT
CCCACCCTTCTCAATTTGACGTGATGGTAATGCCAAACTTGTACGGGAACATCATTGATA
ATTTGGCTGCAGGTCTCGTTGGAGGCGCTGGTGTGGTGCCGGGTGAAAGTTACAGCCCTG
ATTGTGTGGTGTTTGAAACTGGAGCTCGCCATCCATTTGCACAAGCTGTTGGACGTAACA
TAGCCAACCCCACTGCCATGCTAATGTGTGCTGCTAATATGTTGCATCATATGAATTTAG
TGGCGCACGCCAAACTTGTACAAGATGCACTTTTAAAAGTTCTTCGAGATGGAAAGATAC
GCACCACTGACTTGAAGGGTTATGCAACCACCACCGAATTCACAGCTGCAGTTATTAATA
ATTTAGGTAAAGCTTAAAACTCGCCAAGATTCCACACAAGTTTATTATTTATTTAATGTT
AGGCTGCTAGTTCCGTTTATTTTTTTCCCAAAGTTCAATAAAAAATATTTTGTTGTCAAA
TCTTTTATATGACGTCCCAGTTTACGTCATTGTATGACGTCAGAAGTACTGAAAGTTGTT
GTTGTGGCGTGCTCCCTACGTCCTAATAATATTTCCGTTTGAGAACGATTATTACGCAAT
AATTAAGTTAATGATGAAATTGTACCTTAAATAGCATCCACACATTTAGCTTTAATTAGG
GTTCAAATTACAAAGAAGTTCAATTCTCATACTTGAA

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[48-383] 4.1E-150
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[52-379] 1.7E-148
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[53-379] 2.9E-73
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[274-293] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	53.509 %	353	5.29E-120
IDH3B_HUMAN	67.976 %	466	5.96E-165
IDH3A_HUMAN	46.341 %	288	4.06E-95