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TRANSCRIPT CARD

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  1. Clone 'ciem812g07' > 
  2. Clone 'cien160004' > 
  3. Clone 'mae42g01' > 
  4. Clone 'cima877637' > 
  5. Transcript 'KH2012:KH.C5.396.v1....'

Transcript Model

Transcript Id

KH2012:KH.C5.396.v1.A.ND1-1

Possible name(s)

LRGUK; LRRC23; PPP1R7

Gene model

KH2012:KH.C5.396

Location

KhC5 [1,294,130 / 1,298,135]

Sequences

Amino acid sequence

Length: 326

>KH.C5.396.v1.A.ND1-1
EMSEGSDFEDDVGEEEEEDAGVITEAGKLPENPLVQEMVPECLNLLCKIGNGLAHAYVRL
DAHERDLTDIELLRKFIHVRYVDVSGNLLEDISPLNNLTHLLTLKADKNNLKTAKLDPLP
YLQIMNLSGNKITSTEGVEHPLLEQLNLNSNLIPLVSGLNPKFLTNLTTLELRGNKLTTT
AGIYLPNLKNLYLAGNSLKQVEDLDKLENLMILHLRDNQIDKLDGFTENMKKLQYINLRA
NNVSDLKELKKMVALPMLRALVLNDNPCLEEDGYRMEVLIVLRKLERLDKDEYTEDERVE
AEDLYEQRRQEELMKSEEQEEIADEG

Nucleotide sequence

Length: 1,419

>KH2012:KH.C5.396.v1.A.ND1-1
CAAAGTTGTGAACGTACAATTTGTTAAGACCACAGGACAATAATTTGAACCGTGATTAGC
AGTAACTTTAGAAAATTGAATACATAATTTTACGACATTCTAACTGCGTTAAAAAGAATA
AAAATACCTGATGTAAATTTGTTTTTATAACATAGTTAGTCGCAGAAGCCCTTTTGTAAG
AAATGTCTGAAGGATCTGATTTTGAAGACGATGTTGGAGAGGAAGAAGAAGAAGACGCAG
GCGTTATCACTGAAGCGGGAAAATTGCCTGAAAACCCTCTAGTACAAGAAATGGTCCCAG
AATGCTTAAATCTGCTTTGTAAGATTGGTAATGGGCTCGCTCATGCTTATGTTAGACTGG
ATGCCCATGAAAGAGACTTAACAGACATTGAGTTACTGCGGAAGTTTATCCACGTACGTT
ATGTGGATGTCTCAGGAAACCTGCTTGAAGATATTTCACCTTTGAACAATCTCACACATT
TACTAACATTAAAAGCCGACAAAAACAACCTGAAAACTGCAAAACTGGATCCGTTGCCTT
ACTTACAGATAATGAATTTGTCCGGTAATAAGATAACAAGCACTGAAGGAGTTGAACATC
CTTTGCTTGAACAACTCAATTTAAATAGCAACTTGATACCTTTAGTAAGTGGCTTAAATC
CCAAGTTTCTTACCAACCTCACAACCTTAGAACTGCGAGGAAATAAACTGACAACAACTG
CTGGAATATATTTACCAAATCTTAAAAATCTCTACTTGGCAGGAAATTCACTGAAACAAG
TGGAAGATTTGGATAAACTTGAAAACCTAATGATTCTTCATTTAAGAGATAATCAAATTG
ACAAGTTGGATGGTTTTACTGAAAACATGAAGAAGTTACAATATATTAATTTAAGGGCAA
ATAATGTCTCAGATTTAAAAGAACTTAAAAAGATGGTAGCTCTTCCAATGCTGAGAGCAC
TGGTTTTAAATGATAACCCCTGCTTGGAAGAAGATGGTTACCGCATGGAAGTCCTCATCG
TTCTTCGTAAATTAGAGAGACTGGATAAAGATGAATACACGGAAGATGAACGAGTAGAGG
CAGAGGACCTCTATGAGCAGAGGAGGCAAGAGGAACTGATGAAATCAGAAGAGCAAGAAG
AAATTGCTGATGAAGGATGAAAATCTTCCTTGTATGATGTTTTGTTGATTCTTCACCTCA
ACATAGAGGTCTTTCATATATTTTTATGTTTATGAAAAGGTTTTACATTTTGCTAAAAAT
ACAATGCTTGCTTGTGTCGACAGCTGTTAATTTGGTTCGCTGTAGCTTCAGTGCGCCAGT
ATTCACCACTGTTTTGGATATTCGAGTTTCATTAGTGTTTTTCTTTTGAACGTGTCGCAA
TTCAGTCATCCGAAACGCAGCGAGCGAGGAACACGAAGT

InterProScan

Gene3D
LRR_dom_sf (IPR032675) - T[47-183] 6.6E-19 - T[184-306] 2.1E-25
ProSiteProfiles
Leu-rich_rpt (IPR001611) - T[78-99] 7.119 - T[121-142] 6.726 - T[143-163] 5.81 - T[166-186] 5.856 - T[187-208] 8.528 - T[209-230] 7.119 - T[232-253] 6.903

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PP1R7_HUMAN 31.356 % 79 1.74E-16
LRGUK_HUMAN 33.091 % 119 1.45E-29
LRC23_HUMAN 60 % 310 6.67E-105