- Transcript 'KH2012:KH.C9.217.v1....' >
- Transcript 'Boleac.CG.SB_v3.S0.g...' >
- Transcript 'KH2012:KH.L116.19.v1...' >
- Transcript 'KH2012:KH.C5.455.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.455.v1.A.nonSL2-1
Possible name(s)
MTREX; SKIV2L
Gene model
Location
KhC5 [3,231,893 / 3,241,247]
Amino acid sequence
Length: 1,042
>KH.C5.455.v1.A.nonSL2-1
RYGIEMAGFGDEIFNVFDEESDEKSKSPRKSTAKRPKISDDSEKLPEKKQKCEEEEDETK
IRDETEKLSELPPPPKDEVEDFSSLLEALPKVETKSMESLITGCTHEVAFQSGSDVPRLL
PKAAEPAKEYKFILDPFQQEALLCLDNNQSVLVSAHTSAGKTVVAEYAIAMCLRDKQRVI
YTTPIKALSNQKYRDLYEEFSDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREV
AWVVFDEIHYMRNKERGVVWEETIILLPDNVRYVFLSATIPNARQFASWICHLHKQPCHV
VYTDYRPVPLQHYIFPAGGDGLHLVVDDNGDFREDNFNTAMAVLRDAGDNAKSDFNRRGK
QGGQRGKSGCIQIVELIMERKFLPAIVFSFSKKECEFYANQVQKLKFNSTEERKLVQEVF
DNAMDSLSEEDRRLPQVEACLPFVLNGIGIHHGGLLPIIKETIEILFSEGLIKVLFATET
FSMGVNMPAHTVVFTSIRKFDGKDFRWITGGEYIQMSGRAGRRGMDENGLVIMMVDEKLS
PSVGKALVKGSPDPLDSAFRLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYTAIPEMLEN
VSKLETEYSEMKIKNEEESMTYYRIRQQLNKLASQLEEFVHLPKFCLPFLQPGRLVKVRN
GEHEFGWGVVVNFQKKQPKSSGPMRGGDEPQPEYVVDVLLNCDKEGLHSVAVRLPRPAKD
SLKSEMAVVPIMLPLIKALSSVRLFLPKDLRPLDNRQSLLRALEEVKKRFPDGIPLLDPV
EDMSIKDDRLKSIVKKTEAFERRMYKHPLHTRSDVTQVYQLCENKTKLANKVKEAKRALK
KARTILQMDELKCRKRVLRRLGYATMSDVIETKGRVACEISAADELLLTELIFNGVFNNL
TPAQCAALLCCFVFDEKSKSIPKLSEELATPLRQLHETARKIAKVSNESKLVLDEEEYVQ
KFKTMLMDVVHSWCNGSSFAKIAEMTDVFEGSIIRCMRRLEELLREMCHAAKAIGNTHLE
NKFSEGIQLIKRDIIFAASLYL
Nucleotide sequence
Length: 3,419
>KH2012:KH.C5.455.v1.A.nonSL2-1
AGTTATTAACGTTACGGTATAGAAATGGCAGGATTTGGTGATGAAATATTCAACGTATTT
GACGAAGAAAGTGACGAGAAGTCAAAATCACCAAGAAAATCAACTGCAAAGAGGCCCAAA
ATATCTGATGACTCTGAAAAACTTCCCGAAAAGAAGCAAAAATGTGAAGAGGAAGAAGAT
GAGACTAAAATCCGCGATGAAACAGAGAAATTGAGTGAACTACCGCCTCCACCAAAAGAC
GAAGTAGAAGACTTTTCCAGCCTTTTGGAAGCATTGCCAAAAGTTGAAACGAAATCTATG
GAGTCGTTAATCACTGGATGCACACATGAAGTTGCGTTTCAATCTGGATCAGATGTCCCT
CGCTTGCTACCAAAAGCTGCAGAGCCAGCCAAAGAGTATAAGTTTATTCTGGATCCTTTC
CAACAAGAGGCTTTATTGTGTCTTGATAACAATCAGTCTGTTCTTGTATCTGCTCATACC
TCTGCTGGGAAAACAGTAGTAGCTGAATATGCCATTGCAATGTGCCTACGTGACAAGCAA
CGTGTTATATATACAACTCCAATCAAAGCTCTTAGTAATCAAAAGTACAGAGACCTCTAT
GAGGAATTTTCAGATGTTGGTTTGATGACCGGGGATGTTACCATTAATCCAACAGCATCT
TGCCTTGTTATGACCACGGAGATTTTGCGGAGTATGTTATACCGTGGATCAGAAGTTATG
CGGGAGGTTGCGTGGGTGGTATTTGACGAGATCCATTATATGAGGAACAAGGAAAGAGGA
GTAGTTTGGGAGGAGACTATCATCCTCCTCCCAGATAATGTTCGTTATGTTTTCCTCTCT
GCCACGATTCCGAACGCTCGGCAGTTCGCATCATGGATTTGTCACCTTCATAAACAGCCG
TGCCATGTGGTGTATACTGACTACCGACCGGTGCCACTTCAACATTACATCTTCCCTGCT
GGGGGGGACGGACTTCATCTGGTTGTGGATGATAATGGTGACTTTCGAGAGGATAATTTC
AACACAGCAATGGCGGTGTTACGTGACGCAGGAGATAATGCTAAAAGTGATTTTAACAGA
CGAGGAAAGCAGGGTGGACAACGTGGCAAGAGCGGTTGTATTCAAATAGTTGAACTTATC
ATGGAAAGAAAATTTCTTCCAGCAATTGTTTTTTCATTCAGTAAAAAGGAATGTGAATTC
TATGCAAACCAAGTACAAAAACTCAAGTTCAATTCAACTGAGGAGCGAAAATTAGTTCAA
GAAGTTTTCGACAACGCAATGGACTCACTTTCGGAGGAAGATCGCCGGCTCCCTCAAGTG
GAGGCTTGTTTACCGTTCGTGTTGAACGGAATCGGAATCCATCATGGTGGACTTCTTCCT
ATTATTAAGGAAACAATTGAGATTCTGTTTTCAGAAGGATTAATAAAGGTTCTATTTGCC
ACTGAAACATTTTCAATGGGTGTTAACATGCCAGCTCACACTGTTGTTTTTACAAGTATA
CGGAAGTTTGATGGCAAAGACTTCAGATGGATTACTGGTGGGGAGTATATACAGATGAGT
GGAAGAGCGGGGAGGAGAGGAATGGATGAGAACGGCCTCGTAATCATGATGGTTGATGAA
AAATTATCCCCCAGTGTTGGGAAGGCATTAGTAAAGGGTTCCCCTGACCCACTTGATTCA
GCCTTCCGTCTAACATATAATATGGTTCTTAACTTGCTCCGTGTGGAAGAAATCAACCCA
GAATATATGCTGGAAAAATCTTTCTATCAATTCCAACACTACACTGCAATACCTGAGATG
TTGGAAAATGTGTCCAAGTTAGAAACAGAATATTCTGAAATGAAGATCAAAAATGAAGAA
GAGTCGATGACATATTACCGCATTCGGCAGCAACTAAACAAACTCGCATCACAACTGGAG
GAGTTTGTTCATCTTCCCAAATTTTGTCTCCCGTTTCTGCAACCGGGTAGGCTTGTAAAA
GTTCGTAATGGTGAGCATGAATTTGGATGGGGTGTGGTCGTCAACTTTCAAAAAAAGCAA
CCAAAGTCGAGCGGTCCCATGCGTGGTGGTGATGAACCACAACCTGAATATGTTGTGGAT
GTGTTACTTAACTGTGACAAGGAAGGGTTACATTCAGTCGCTGTGAGGTTGCCACGGCCA
GCAAAGGACTCCTTGAAAAGTGAAATGGCCGTAGTCCCAATAATGCTGCCGTTAATAAAA
GCCCTTAGTTCTGTGAGACTGTTTCTTCCTAAAGACCTCAGACCGTTGGATAATAGACAA
TCACTGCTTCGTGCATTGGAGGAAGTAAAAAAGAGATTCCCGGATGGGATTCCTCTGCTC
GATCCAGTTGAGGACATGTCAATCAAAGATGATCGATTGAAATCAATTGTAAAGAAGACG
GAAGCTTTTGAGAGAAGAATGTATAAACATCCTCTTCATACAAGATCAGATGTCACTCAA
GTTTATCAGCTTTGCGAGAATAAAACAAAATTGGCGAATAAAGTAAAAGAAGCAAAACGA
GCGTTGAAAAAAGCGCGCACCATATTACAAATGGATGAATTAAAATGTCGGAAACGTGTT
TTACGACGACTTGGTTACGCTACTATGTCCGATGTTATTGAAACAAAAGGTCGAGTTGCT
TGCGAGATAAGTGCAGCCGATGAATTGTTGTTAACAGAGTTAATTTTCAACGGAGTATTC
AACAATCTTACCCCTGCCCAGTGCGCTGCTTTGCTCTGTTGTTTTGTATTTGATGAAAAG
TCGAAAAGCATTCCAAAACTCAGTGAAGAACTCGCCACTCCGTTACGACAACTACATGAA
ACTGCACGAAAAATTGCAAAGGTTTCTAATGAATCAAAACTTGTTCTTGATGAAGAAGAA
TATGTTCAAAAGTTTAAAACAATGTTAATGGATGTTGTCCATTCATGGTGCAATGGATCA
TCATTCGCAAAGATCGCAGAAATGACCGACGTTTTTGAAGGAAGCATCATAAGATGCATG
AGAAGGTTGGAGGAATTGCTCCGAGAGATGTGTCACGCTGCCAAAGCCATCGGTAACACT
CATCTTGAGAACAAATTTTCCGAAGGAATTCAACTTATTAAGCGTGACATCATTTTCGCA
GCCAGCTTGTATTTATAAACAATTTCTAAATAAAGATCCCTCCTTGTTTACGACAGCCAT
TTCATTTGAGAGGTTTGAGTCCAAGTTTCGCTCTGAGCTCGTTCGCCTCCTGGATTTCTA
TATCAACTTCACTCTTTGCCTTCTTACTATGTTTACTACTTTTCTTCTTTGACCTGCTCA
ACGTTTTACAATACAATTAGTGAAGTAGTAACTATGTGTAATAATAAACTAATGTCAGCT
AAACATAGTTTTTAGGCCTCTAGCAAAACAAATTTTCGTAAATAAAAATACCGACCGTG
| PIRSF |
Ski2-like (IPR016438) - T[9-1042] 0.0 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[130-313] 3.3E-31 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[136-281] 1.7E-16 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[142-298] 22.675 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[145-283] 1.53E-46 - T[348-404] 1.53E-46 - T[444-538] 1.53E-46 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[372-573] 12.267 |
| CDD |
Helicase_C (IPR001650) - T[372-534] 4.07166E-15 |
| SMART |
Helicase_C (IPR001650) - T[435-524] 1.4E-15 |
| Pfam |
Helicase_C (IPR001650) - T[448-524] 9.9E-7 |
| Pfam |
rRNA_proc-arch_dom (IPR025696) - T[578-841] 1.1E-83 |
| SMART |
Ski2_C (IPR012961) - T[865-1042] 4.9E-95 |
| Pfam |
Ski2_C (IPR012961) - T[868-1037] 1.7E-58 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTREX_HUMAN | 66.348 % | 1445 | 0 |
| SKIV2_HUMAN | 36.41 % | 578 | 0 |