- Transcript 'KH2012:KH.C7.159.v2....' >
- Transcript 'KH2012:KH.C5.298.v1....' >
- Transcript 'KH2012:KH.C10.558.v1...' >
- Transcript 'KH2012:KH.C9.38.v11....' >
- Transcript 'KH2012:KH.C5.551.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.551.v1.A.nonSL2-1
Possible name(s)
EEA1; RBSN; RUFY1
Gene model
Location
KhC5 [1,753,520 / 1,758,746]
Amino acid sequence
Length: 595
>KH.C5.551.v1.A.nonSL2-1
TLVLRRFRLFLLVMGTVKEGFLCPICVQDLGSFHGLQKHFESAHTAEDRAVLDQIKGLFS
KAKVRLLKKDEITNHEVALSSNHSMQQHAGPVWESQDIGQTRNHTSNFKKIRDARIDRFV
IESNKVLIRLDKLLCQVMKTKRKNTKEFEQTLVPWVRDVDVPYCPTCGDRFNVARRRHHC
RLCGSIMCTKCSLFVQLELADQLVESLRKVPGMRKRTQSDLNLSRSASMSSSQDEEISLR
CCHDCYVVLMKRKDRLEQDKNMPLLVLLYEKLQSATNGANSLAPEYEKIADSLNQGEETY
ELDTANELRFKLIKLYEKIDVVSKKIEVLNSEDEEFPLSPTTVRLQTSIRRASHAYLQEN
MLTLRSLPSFPKLEILQKNRRQEQEKKMRRQREEAERQRIEEERREMELEAQKIRNHQPQ
VSSMHKSSSDAVLDKGWRANTVNQNSNQFGNPFETNPLLEQINYVQQMLKQAKSENRFEE
IESLNRNLRELENELKRQEIRGKKVPQKKLQNTNPFLIDTPSTNGNTNPFLMDETAKPFN
KSYGNPFEETEADPVLHQISYIKNCIEKAVKAGKTDEARMLRENLEQLHLMYTNQ
Nucleotide sequence
Length: 2,061
>KH2012:KH.C5.551.v1.A.nonSL2-1
ACTTTAGTACTGCGTCGATTTCGGTTGTTTCTATTAGTTATGGGTACAGTTAAAGAAGGT
TTTCTGTGTCCAATTTGTGTTCAAGATTTGGGTTCGTTTCATGGATTACAAAAACATTTC
GAAAGCGCACATACAGCGGAGGATCGAGCGGTTTTGGATCAAATTAAAGGTCTTTTCAGC
AAGGCAAAAGTTAGATTATTAAAAAAAGATGAAATAACCAACCATGAAGTTGCTTTGTCA
TCAAATCATTCAATGCAACAACATGCTGGTCCAGTGTGGGAGTCACAAGACATAGGCCAA
ACTCGAAACCACACAAGCAACTTTAAAAAGATCAGGGATGCTCGAATTGATAGATTTGTT
ATCGAATCAAACAAGGTTTTAATTCGGCTTGATAAGCTTCTTTGCCAAGTTATGAAAACT
AAAAGAAAAAACACAAAAGAATTTGAACAAACGTTGGTGCCATGGGTGCGTGATGTTGAC
GTACCATATTGCCCCACATGTGGTGATCGGTTTAACGTTGCGAGAAGACGCCATCATTGT
AGGTTGTGTGGGTCTATCATGTGCACTAAATGTTCTTTGTTCGTTCAACTAGAGTTGGCA
GATCAATTGGTGGAAAGCTTAAGGAAAGTACCTGGTATGCGTAAAAGAACACAATCAGAT
TTGAACCTGTCTCGTAGCGCATCGATGAGCTCATCTCAAGACGAGGAGATCAGTTTACGT
TGTTGTCATGATTGCTATGTTGTGCTAATGAAGAGAAAAGACAGATTGGAACAAGACAAA
AATATGCCCTTGTTAGTTCTTCTTTATGAGAAATTACAAAGTGCAACTAATGGGGCTAAC
AGCCTGGCACCAGAATATGAAAAAATTGCTGATTCTCTCAATCAAGGTGAGGAGACTTAC
GAACTGGACACAGCAAATGAATTGCGTTTCAAGCTTATTAAGTTGTATGAGAAAATTGAT
GTTGTGAGTAAGAAGATAGAGGTGCTGAACTCAGAAGATGAAGAATTTCCTCTTTCACCG
ACGACAGTTCGACTTCAAACTTCAATACGTAGAGCTTCACATGCTTATTTACAAGAGAAC
ATGTTGACTCTTCGCTCTCTTCCCTCGTTCCCAAAACTTGAGATCCTCCAGAAGAATCGG
AGGCAGGAGCAGGAGAAAAAGATGAGGAGACAGAGAGAAGAAGCTGAACGACAAAGAATA
GAAGAAGAAAGAAGAGAAATGGAATTAGAAGCTCAGAAGATTAGAAATCACCAACCACAA
GTTTCTAGTATGCATAAAAGCAGCTCCGATGCTGTATTAGATAAAGGGTGGCGTGCTAAC
ACTGTCAATCAAAATTCAAATCAATTCGGAAATCCTTTTGAGACGAACCCATTGTTGGAG
CAGATCAATTATGTTCAGCAAATGTTAAAACAAGCAAAATCGGAAAATCGTTTCGAAGAA
ATAGAAAGTCTAAATCGGAACTTACGAGAGCTGGAGAATGAGTTGAAAAGGCAGGAAATT
CGGGGTAAAAAGGTTCCTCAAAAGAAACTGCAAAATACGAATCCTTTTCTTATTGATACC
CCTTCAACAAATGGAAATACAAATCCATTCTTAATGGATGAAACTGCTAAACCATTCAAT
AAATCTTATGGCAATCCTTTTGAAGAGACTGAAGCAGACCCTGTGCTACACCAAATATCT
TATATTAAAAACTGCATTGAAAAAGCCGTGAAAGCGGGAAAGACTGATGAAGCTAGAATG
TTAAGAGAAAACTTGGAGCAATTGCATTTGATGTATACAAATCAATAGTGTTAATAAGAA
AATATTAATAATTGCTGTTAAGGTATTTAAATCTGATGTTGTACTGCTTTCAATCACAGG
CATGAAGTTTTTATACAATATGTATTACATTGTTCATATATGACTGACCTGTGTTTGGTT
TGATTTTCTTCCCTTTATACTTCAATGAAATTTTTCTCTTTTAAAACTAAAAGAGTCAAT
AGCAGTGTTCGCATGGTGCATTAATTTATTTTTCATGTGCAATTTTGATTCATCTGAACA
TAATACATAAGTTTTAATGTT
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[23-44] . |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[141-212] 1.2E-14 |
| SMART |
Znf_FYVE (IPR000306) - T[150-251] 2.9E-12 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[154-200] 1.87E-15 - T[233-258] 1.87E-15 |
| Pfam |
Znf_FYVE (IPR000306) - T[154-249] 1.4E-17 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[158-250] 10.768 |
| SUPERFAMILY |
Rbsn_Rab-bd_sf (IPR036531) - T[450-498] 1.57E-13 - T[547-592] 2.22E-8 |
| Pfam |
Rbsn_Rab_binding_dom (IPR021565) - T[457-498] 2.3E-14 - T[556-592] 3.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBNS5_HUMAN | 38.462 % | 310 | 3.75E-96 |