- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.L24.2.v1.B...' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C3.35.v1.A...' >
- Transcript 'KH2012:KH.C5.551.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.551.v1.A.nonSL3-1
Possible name(s)
EEA1; RBSN; RUFY1
Gene model
Location
KhC5 [1,753,517 / 1,758,746]
Amino acid sequence
Length: 596
>KH.C5.551.v1.A.nonSL3-1
STLVLRRFRLFLLVMGTVKEGFLCPICVQDLGSFHGLQKHFESAHTAEDRAVLDQIKGLF
SKAKVRLLKKDEITNHEVALSSNHSMQQHAGPVWESQDIGQTRNHTSNFKKIRDARIDRF
VIESNKVLIRLDKLLCQVMKTKRKNTKEFEQTLVPWVRDVDVPYCPTCGDRFNVARRRHH
CRLCGSIMCTKCSLFVQLELADQLVESLRKVPGMRKRTQSDLNLSRSASMSSSQDEEISL
RCCHDCYVVLMKRKDRLEQDKNMPLLVLLYEKLQSATNGANSLAPEYEKIADSLNQGEET
YELDTANELRFKLIKLYEKIDVVSKKIEVLNSEDEEFPLSPTTVRLQTSIRRASHAYLQE
NMLTLRSLPSFPKLEILQKNRRQEQEKKMRRQREEAERQRIEEERREMELEAQKIRNHQP
QVSSMHKSSSDAVLDKGWRANTVNQNSNQFGNPFETNPLLEQINYVQQMLKQAKSENRFE
EIESLNRNLRELENELKRQEIRGKKVPQKKLQNTNPFLIDTPSTNGNTNPFLMDETAKPF
NKSYGNPFEETEADPVLHQISYIKNCIEKAVKAGKTDEARMLRENLEQLHLMYTNQ
Nucleotide sequence
Length: 2,064
>KH2012:KH.C5.551.v1.A.nonSL3-1
AGTACTTTAGTACTGCGTCGATTTCGGTTGTTTCTATTAGTTATGGGTACAGTTAAAGAA
GGTTTTCTGTGTCCAATTTGTGTTCAAGATTTGGGTTCGTTTCATGGATTACAAAAACAT
TTCGAAAGCGCACATACAGCGGAGGATCGAGCGGTTTTGGATCAAATTAAAGGTCTTTTC
AGCAAGGCAAAAGTTAGATTATTAAAAAAAGATGAAATAACCAACCATGAAGTTGCTTTG
TCATCAAATCATTCAATGCAACAACATGCTGGTCCAGTGTGGGAGTCACAAGACATAGGC
CAAACTCGAAACCACACAAGCAACTTTAAAAAGATCAGGGATGCTCGAATTGATAGATTT
GTTATCGAATCAAACAAGGTTTTAATTCGGCTTGATAAGCTTCTTTGCCAAGTTATGAAA
ACTAAAAGAAAAAACACAAAAGAATTTGAACAAACGTTGGTGCCATGGGTGCGTGATGTT
GACGTACCATATTGCCCCACATGTGGTGATCGGTTTAACGTTGCGAGAAGACGCCATCAT
TGTAGGTTGTGTGGGTCTATCATGTGCACTAAATGTTCTTTGTTCGTTCAACTAGAGTTG
GCAGATCAATTGGTGGAAAGCTTAAGGAAAGTACCTGGTATGCGTAAAAGAACACAATCA
GATTTGAACCTGTCTCGTAGCGCATCGATGAGCTCATCTCAAGACGAGGAGATCAGTTTA
CGTTGTTGTCATGATTGCTATGTTGTGCTAATGAAGAGAAAAGACAGATTGGAACAAGAC
AAAAATATGCCCTTGTTAGTTCTTCTTTATGAGAAATTACAAAGTGCAACTAATGGGGCT
AACAGCCTGGCACCAGAATATGAAAAAATTGCTGATTCTCTCAATCAAGGTGAGGAGACT
TACGAACTGGACACAGCAAATGAATTGCGTTTCAAGCTTATTAAGTTGTATGAGAAAATT
GATGTTGTGAGTAAGAAGATAGAGGTGCTGAACTCAGAAGATGAAGAATTTCCTCTTTCA
CCGACGACAGTTCGACTTCAAACTTCAATACGTAGAGCTTCACATGCTTATTTACAAGAG
AACATGTTGACTCTTCGCTCTCTTCCCTCGTTCCCAAAACTTGAGATCCTCCAGAAGAAT
CGGAGGCAGGAGCAGGAGAAAAAGATGAGGAGACAGAGAGAAGAAGCTGAACGACAAAGA
ATAGAAGAAGAAAGAAGAGAAATGGAATTAGAAGCTCAGAAGATTAGAAATCACCAACCA
CAAGTTTCTAGTATGCATAAAAGCAGCTCCGATGCTGTATTAGATAAAGGGTGGCGTGCT
AACACTGTCAATCAAAATTCAAATCAATTCGGAAATCCTTTTGAGACGAACCCATTGTTG
GAGCAGATCAATTATGTTCAGCAAATGTTAAAACAAGCAAAATCGGAAAATCGTTTCGAA
GAAATAGAAAGTCTAAATCGGAACTTACGAGAGCTGGAGAATGAGTTGAAAAGGCAGGAA
ATTCGGGGTAAAAAGGTTCCTCAAAAGAAACTGCAAAATACGAATCCTTTTCTTATTGAT
ACCCCTTCAACAAATGGAAATACAAATCCATTCTTAATGGATGAAACTGCTAAACCATTC
AATAAATCTTATGGCAATCCTTTTGAAGAGACTGAAGCAGACCCTGTGCTACACCAAATA
TCTTATATTAAAAACTGCATTGAAAAAGCCGTGAAAGCGGGAAAGACTGATGAAGCTAGA
ATGTTAAGAGAAAACTTGGAGCAATTGCATTTGATGTATACAAATCAATAGTGTTAATAA
GAAAATATTAATAATTGCTGTTAAGGTATTTAAATCTGATGTTGTACTGCTTTCAATCAC
AGGCATGAAGTTTTTATACAATATGTATTACATTGTTCATATATGACTGACCTGTGTTTG
GTTTGATTTTCTTCCCTTTATACTTCAATGAAATTTTTCTCTTTTAAAACTAAAAGAGTC
AATAGCAGTGTTCGCATGGTGCATTAATTTATTTTTCATGTGCAATTTTGATTCATCTGA
ACATAATACATAAGTTTTAATGTT
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[24-45] . |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[142-213] 1.2E-14 |
| SMART |
Znf_FYVE (IPR000306) - T[151-252] 2.9E-12 |
| Pfam |
Znf_FYVE (IPR000306) - T[155-250] 1.4E-17 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[155-201] 1.92E-15 - T[234-259] 1.92E-15 |
| ProSiteProfiles |
Znf_FYVE-rel (IPR017455) - T[159-251] 10.768 |
| SUPERFAMILY |
Rbsn_Rab-bd_sf (IPR036531) - T[451-499] 1.57E-13 - T[548-593] 2.22E-8 |
| Pfam |
Rbsn_Rab_binding_dom (IPR021565) - T[458-499] 2.3E-14 - T[557-593] 3.1E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBNS5_HUMAN | 38.462 % | 311 | 2.54E-96 |