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  1. Transcript 'KH2012:KH.C5.56.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C5.56.v1.A.nonSL3-1

Possible name(s)

CNN1; CNN3; TAGLN

Gene model

KH2012:KH.C5.56

Location

KhC5 [209,367 / 210,768]

Sequences

Amino acid sequence

Length: 79

>KH.C5.56.v1.A.nonSL3-1
SQYKQMASKYDEYLEEDLREWIAKTSDCQIMSEKTFQSWLKDGRVLCFLIEKLQPDLLKK
GMPHETMLNPFRCVCYFYC

Nucleotide sequence

Length: 959

>KH2012:KH.C5.56.v1.A.nonSL3-1
AACTTGTTGATCTCGCAAGAGATCTTGCAGGAGGGTTTTATTTAATAGAATAATACAGCT
ACATTTTTTGAGTTACGTTCTACCAGGTAAGAATGGCGAACCAGGGCCCTAGTTATGGAT
TCAGTCGTGAAGTTCGAAACAAGGTGAGCTATTTGATTACATACTTTTTATTTCTAAAGT
CAATACAAACAGATGGCATCAAAATATGATGAATATCTGGAAGAAGATTTGAGAGAATGG
ATTGCAAAGACATCAGATTGCCAAATTATGAGCGAGAAAACTTTTCAAAGCTGGTTAAAA
GATGGAAGAGTGCTTTGCTTTTTAATAGAAAAACTTCAACCTGACCTACTTAAGAAGGGG
ATGCCCCATGAAACCATGCTCAATCCATTCCGATGTGTATGTTATTTCTATTGTTAAGTG
AAATACTTTTCATTCCTATTTTACATTAAATAATAAATATCATGATAAATTAGCTTAACA
TAAAGCATATCCTCTAGTCTAAAACAACTGTGCTGCCAAATGTATTTTTTACCCTAAAAA
AATATAGTTTGAATGGACTGTGAAATGTCAGTATAATATTTTTCTGGATAAGCCACAATT
TAATTGCAAAGAAAAACGTTTTTTGTTTATATTTGTTATTATACTTGTTATTAATAATAG
TTTTGTAATGTTGTACAGCTTTCCTATTTTTTCTGTATTTTTAAAAACCTTTTTCCAGTC
TGACCTAAAACAACCAAGTGGTGTATTCATATTCAAAGTCTATTCCATTATGTGACATGT
ATATCAGTATACATGATAATCATTTTCTGTTATGAATCAAAGATGGAAAATATTAATGCA
TTTCTTGATGCGATTAAACTGATGGGAGTACCTGAACCTTCCTTATGCACAACCGCTGAT
CTTTATGATGGGTCTGGGATGTCACAGGTTTTTATTTTTTTAATTTTAGTCTCTGCTAT

InterProScan

Gene3D
CH_dom_sf (IPR036872) - T[1-77] 2.7E-12
SUPERFAMILY
CH_dom_sf (IPR036872) - T[5-72] 3.67E-13
PRINTS
SM22_calponin (IPR003096) - T[10-23] 1.9E-6 - T[36-51] 1.9E-6
ProSiteProfiles
CH-domain (IPR001715) - T[12-79] 8.511
Pfam
CH-domain (IPR001715) - T[15-63] 2.5E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value