- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C5.57.v4.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.57.v4.A.SL2-2
Possible name(s)
LNX2; MPDZ; PATJ
Gene model
Location
KhC5 [3,705,020 / 3,728,897]
Amino acid sequence
Length: 1,668
>KH.C5.57.v4.A.SL2-2
TSIMPSQEELEKAALIIKRIQNQLKRQGDYSNDAELEAMKSLMESPLFKKMAQLQASIQQ
LKKEVKKDDFDINNVEFSHENGGLVVDGKEVENDSSMFNGRNGDLEEFIKSAAQGRETEM
IEIFKSENEGLGFSVVGLKSEHRGDLGIFVQDIRSGGVADRDGRLKESDQILVINNQPLT
QTISHQQAIGILQKVKGTVKLVVARGGIPQSQGHLSAEGSQVSRSSSILSSLSQASGMPP
DTKWTDVETIDLRNDGRGLGFGIVGGRSTGGVVVKTIVPGGAAHEDGRLKSGDHILRIGE
EDLMNMGSEEVAQVLRQCGAHVRLIVARGPVDDDDDVNDDLQDDKQDAGERGSVSSEDDS
HSSYSTDAQIFDVELVKDAKGLGITIAGFLPEDQNRNGTPGIYVKGVSSGSAADIDGRIR
PGDKLIAVDGKRLDGDDVSSDQAVEVLRSTGVVVRLTLARTTNRNETIFLHSFFFYLQQN
KSQPVSRQIVNERLQQEKEFEVIIRLSILFPGQELSPDEEERIKQKWRVVMGPQCDIVIA
QLKKYNYLSGLGISLEGTVDENEMPHHYIRSILPEGPVGQSNKLEAGDELLEVNGNHLLG
LSHVEVVVILKELPLTVRMVCARPKEHWTRDPARDSVVFEEKDGDFLEMKMPPINVNQFH
PQSSVSDSDETDVETSPKNEQEQLNSAWEDEVTVIELEKGDRGLGFSILDFQDPLHEDKT
AVLVRSLVDGGIAEQDGRLEPGDRLIFVNDKSLQFADLDQAVRVLKAVPQGRVLIGVTKP
RPMFRVPPSSDSEDAVEEEEVRTPVLPRPPSVRSSSSSSSSTSQEMQHYPMPSDSQYSAS
PVEMEVKLPGPPPPPPHIEPNPPTPEYEPPTPRYEPPTPRYEPPAHHFEPPQPQIVSEPL
QQSYEPPIQRYEPPQPQTPPESPPAAPHVIRTQSGKYTVKDYNRPARLSSSETNPVTTAN
QKVEVKQVQMSGMTAIAVTANTIQRKEEPQQPIIRQQEVFSSAPVVPPKPVGYTAPSWQT
AEPEKPKPKPPIDGFERIVQMSKGKSSLGITVSPDKEGDGLIVRSVITGGAVARAGEPNI
GDMIRRVNNDSATGLGAAQARSLIRNHSAYSADVKIAYIPKKYIEAFKLGLPVPEDSDVD
EDRRTPKTPSRVDHFAALKSVFEMQNGQQPQDASKFYLDSSLWGSTKRVDIRREAGQSLG
ISIVGGKNINANSQQQISLDNGDLIDGIFIKEIIEGSPVDVNGEMKPGDKILKVDGVDLS
NATHEGAVEAILKAGVHVVFHVQTFVGHPKQEPPPPQPEEESEIVKAERKYGHLPGEIHV
VEMVKGPAGVGLSLAGNKDRSQQQIFVVGVNPNGAAGKDGRVKVGDQLLEINHVPLNQRN
NHELASNVIKNAKSKLLFVINRQQKEARADKPLKKTPSVESSSHRRQSSDVPAEKSPPPP
KRSSSGGRHSPFSDVRVIKLVKDFQGLGFAISETPTGIVVQSIAPGGTADRDGRLVRGDH
ILAVDDQSVSGVSYETAISILKQSRGTVKLTVASGPVKSSASSDASSVTSSGHRLSTMSP
TLDSGSENSDPLTCPIIPGRETTIEINKGKAGLGVSIVGGSDSLLDAVLVHTVYEQGAAA
KDGRLWPGDRILTVNNHSLRHATHDEAIEVLRNTPGKVHLTILRDENR
Nucleotide sequence
Length: 5,333
>KH2012:KH.C5.57.v4.A.SL2-2
GACACTGAATTTTTAAACTAAAATCTGTGACTTTGGTGTTAAACAAGCATCATGCCGTCG
CAAGAAGAGCTTGAAAAAGCAGCTTTGATTATTAAACGGATTCAAAACCAGTTAAAAAGG
CAAGGTGATTATTCCAATGATGCTGAACTAGAAGCTATGAAGTCACTAATGGAGAGTCCG
CTGTTTAAGAAGATGGCACAACTTCAAGCTTCAATACAACAACTTAAAAAAGAGGTAAAA
AAAGATGACTTCGACATCAACAATGTTGAGTTTTCACACGAAAATGGTGGGTTGGTGGTT
GATGGTAAAGAGGTGGAAAACGATAGTTCAATGTTTAATGGTAGAAATGGAGATTTGGAA
GAATTTATTAAATCTGCTGCGCAAGGAAGGGAGACGGAAATGATTGAAATATTTAAATCG
GAGAACGAAGGACTTGGGTTTAGTGTGGTTGGGTTGAAGTCAGAACACAGGGGTGACCTT
GGAATATTTGTACAGGACATCAGGTCTGGTGGAGTGGCTGACAGGGATGGTAGGTTGAAG
GAAAGTGATCAAATACTTGTCATAAACAACCAACCACTCACGCAAACCATATCGCATCAG
CAAGCAATTGGAATCTTGCAGAAAGTGAAAGGGACCGTCAAACTTGTGGTAGCACGAGGG
GGGATTCCCCAATCACAAGGCCACTTATCAGCGGAGGGGTCACAGGTGTCAAGGTCATCA
TCTATTCTAAGCTCTCTATCCCAAGCCTCAGGCATGCCTCCGGACACAAAATGGACCGAT
GTGGAGACGATTGATCTTCGCAATGATGGAAGAGGACTTGGATTCGGGATCGTTGGAGGA
AGATCAACTGGAGGAGTGGTGGTGAAGACTATTGTTCCTGGAGGAGCAGCTCATGAGGAT
GGGAGGTTGAAGTCCGGGGATCACATTCTCAGGATCGGGGAGGAGGACCTGATGAACATG
GGGTCCGAGGAGGTGGCACAGGTTCTAAGGCAGTGTGGAGCTCATGTTAGACTGATTGTG
GCTCGAGGCCCTGTTGATGATGATGATGATGTAAATGATGATCTTCAGGATGATAAACAA
GATGCAGGAGAAAGAGGATCTGTATCTTCTGAGGATGACTCACATTCTTCCTATTCAACT
GATGCTCAAATATTTGATGTAGAACTAGTGAAGGATGCCAAGGGTCTTGGAATTACTATT
GCTGGCTTCCTTCCAGAAGACCAAAATCGCAATGGTACACCTGGTATATATGTAAAGGGG
GTATCATCTGGTTCTGCAGCTGATATTGATGGTAGGATTCGTCCTGGGGACAAACTGATC
GCTGTTGATGGTAAAAGATTGGATGGAGATGATGTATCAAGCGATCAAGCTGTGGAAGTT
TTACGATCAACTGGTGTGGTTGTACGACTCACTCTTGCAAGGACTACTAACAGAAACGAA
ACTATATTTTTACATAGTTTTTTTTTTTATTTACAGCAAAATAAGTCACAACCTGTATCC
CGACAAATTGTGAATGAAAGACTTCAGCAAGAAAAAGAGTTTGAGGTAATTATAAGGTTG
TCAATTTTGTTCCCAGGTCAAGAGTTGAGTCCTGATGAAGAAGAAAGGATCAAACAGAAG
TGGAGGGTGGTGATGGGACCTCAGTGTGATATTGTGATTGCTCAACTAAAGAAATACAAT
TACCTGAGTGGACTCGGTATAAGTTTGGAGGGCACAGTGGATGAGAATGAAATGCCACAT
CATTATATAAGGTCCATTCTTCCTGAAGGGCCAGTTGGGCAGAGCAACAAGCTTGAAGCT
GGTGACGAACTTCTTGAAGTAAACGGCAACCATTTACTTGGTTTAAGCCACGTAGAAGTG
GTTGTCATCCTCAAGGAGCTTCCTCTTACAGTCCGTATGGTGTGTGCGAGACCTAAGGAG
CATTGGACACGAGATCCTGCGAGGGATTCAGTCGTTTTCGAGGAGAAAGATGGAGATTTT
TTGGAGATGAAAATGCCGCCAATAAACGTCAACCAGTTCCATCCACAAAGTAGTGTTAGT
GACAGCGATGAAACAGATGTGGAAACTTCCCCAAAAAATGAGCAAGAACAGTTAAACAGT
GCTTGGGAAGATGAAGTCACTGTTATTGAACTTGAGAAGGGTGATCGGGGTCTGGGGTTT
AGTATCCTGGATTTTCAGGACCCGTTACATGAAGACAAAACAGCAGTCCTTGTTCGGTCT
TTAGTGGATGGGGGTATTGCGGAACAAGATGGCCGACTTGAACCTGGTGATCGACTTATA
TTCGTTAACGATAAATCGCTTCAGTTTGCCGACCTTGACCAGGCTGTCCGTGTTTTAAAG
GCTGTACCACAAGGTCGTGTATTGATTGGAGTAACTAAACCACGTCCAATGTTCAGAGTT
CCACCAAGTTCTGACAGTGAAGATGCAGTAGAAGAAGAGGAAGTAAGAACACCCGTTCTT
CCACGACCTCCATCAGTCAGATCGTCTTCCTCTTCATCATCTTCCACATCGCAGGAAATG
CAGCATTACCCCATGCCCTCTGACTCCCAGTATTCTGCCTCACCCGTTGAAATGGAAGTC
AAACTACCGGGACCTCCACCCCCTCCACCCCATATTGAACCCAACCCTCCAACCCCAGAA
TACGAACCCCCAACACCCCGCTACGAGCCCCCAACGCCTCGTTACGAGCCCCCAGCACAC
CATTTTGAGCCTCCGCAGCCCCAAATTGTTTCCGAACCCCTACAACAATCTTACGAACCC
CCAATCCAGCGTTACGAGCCCCCGCAGCCCCAAACACCCCCTGAAAGCCCACCTGCTGCC
CCCCATGTTATCCGCACTCAGTCAGGCAAATACACAGTTAAAGATTACAACAGACCTGCG
CGTTTGTCTTCATCAGAAACCAACCCTGTCACCACTGCCAATCAAAAGGTTGAAGTGAAG
CAAGTCCAGATGTCAGGCATGACAGCTATAGCAGTGACAGCAAACACAATACAACGCAAG
GAAGAACCTCAACAACCTATTATCAGGCAGCAAGAGGTGTTCTCATCTGCTCCAGTGGTC
CCCCCAAAACCAGTGGGTTATACTGCCCCCTCATGGCAGACAGCTGAACCTGAGAAACCG
AAACCAAAACCTCCGATCGACGGGTTTGAACGAATTGTTCAAATGTCAAAAGGAAAATCA
AGTTTAGGTATTACTGTCTCACCTGACAAGGAAGGCGACGGTTTAATTGTTCGTTCCGTT
ATCACTGGAGGCGCTGTTGCACGGGCAGGGGAGCCAAACATAGGGGACATGATTCGGCGT
GTTAATAACGACTCAGCTACGGGATTAGGGGCCGCTCAAGCACGCTCGCTAATCCGGAAC
CATTCAGCTTACAGCGCAGATGTCAAGATCGCCTACATCCCTAAAAAATACATTGAGGCA
TTCAAACTTGGACTTCCTGTTCCGGAGGACTCAGATGTTGATGAAGATCGTCGGACACCG
AAAACTCCATCAAGAGTTGATCATTTTGCAGCACTTAAATCTGTATTTGAAATGCAAAAT
GGACAGCAACCTCAGGACGCTTCAAAGTTTTATCTTGATTCCAGTTTGTGGGGTTCTACA
AAGAGAGTTGACATACGTAGAGAAGCAGGTCAATCACTTGGCATCAGTATTGTTGGCGGG
AAAAATATCAATGCAAACTCACAGCAACAAATATCACTGGATAATGGGGACCTTATTGAT
GGAATCTTCATCAAAGAAATAATAGAAGGAAGTCCAGTAGATGTGAATGGTGAAATGAAA
CCGGGCGACAAAATTTTAAAAGTTGATGGGGTTGATTTGAGTAACGCAACACACGAGGGA
GCAGTGGAGGCAATATTAAAAGCGGGCGTGCACGTTGTCTTTCATGTTCAAACGTTTGTC
GGGCATCCAAAACAGGAACCTCCCCCACCCCAGCCAGAAGAAGAGTCAGAAATTGTGAAA
GCAGAGCGGAAATATGGACATTTACCCGGAGAAATTCACGTCGTGGAAATGGTGAAAGGC
CCTGCTGGTGTTGGATTAAGCTTAGCTGGGAATAAAGACAGGTCCCAACAACAGATATTT
GTGGTTGGGGTTAACCCCAATGGAGCAGCGGGTAAAGATGGGCGTGTCAAAGTGGGCGAC
CAACTACTGGAGATCAACCACGTTCCTTTGAACCAACGTAACAACCACGAACTTGCGTCG
AATGTGATCAAGAATGCAAAATCGAAACTTCTATTTGTGATCAATAGACAGCAGAAGGAA
GCACGAGCTGATAAACCTCTAAAGAAAACTCCTTCAGTAGAATCCTCATCCCATAGGAGG
CAGAGCTCTGATGTCCCCGCTGAGAAATCTCCTCCTCCTCCCAAACGCTCCAGCTCTGGA
GGACGACATAGCCCATTTTCTGACGTCAGAGTTATCAAGCTCGTAAAGGATTTCCAAGGA
TTAGGCTTTGCGATCTCTGAAACCCCTACTGGTATAGTGGTTCAATCCATTGCACCAGGT
GGTACAGCAGATAGAGATGGTAGATTGGTAAGAGGAGATCATATACTTGCTGTGGATGAT
CAGTCTGTTAGTGGAGTCTCTTATGAAACGGCGATCTCCATATTAAAGCAGTCAAGGGGA
ACAGTTAAACTTACTGTGGCATCTGGTCCAGTCAAGTCTTCTGCTTCATCAGATGCCTCT
TCTGTTACATCCTCCGGACACAGATTATCCACGATGTCCCCGACCCTGGATAGCGGGAGT
GAGAACTCTGACCCACTTACGTGCCCGATTATTCCAGGCAGGGAAACAACCATAGAAATC
AACAAAGGGAAGGCTGGACTTGGAGTGAGCATTGTGGGAGGATCTGACAGTTTGTTGGAT
GCAGTGTTGGTGCACACAGTGTATGAACAAGGAGCTGCTGCAAAAGACGGAAGGTTATGG
CCAGGTGACAGGATCTTAACAGTGAACAATCACAGTTTGCGTCATGCCACACATGACGAG
GCAATCGAAGTATTGCGCAACACCCCGGGGAAGGTCCACCTTACTATCCTACGTGATGAA
AACAGGTGAAAAAAAAATTGTTGGTTTTTTAAAACAAATCGAGAAAATTTCCTCTTTGCT
GTTTTTGGAAAATATGTTGAAATAAAAAAAGTATTTTTCTTGTTTTATTTCGGTGGAAAA
AATATATGTCTTTGAAAAATATTTCTGTGCATTGTTTGTTGTGTATTTCTTGGCAAAACC
TATTAATTGTTTTATTTCATTAATTTAAAATTGTGTTATTTTATTAATTCAACATGTACA
TGATTGTAAAGTTTCGGTGTGTAAAATAATAATAAAGTGTAAAACGTTTTGGA
| SUPERFAMILY |
L27_dom_sf (IPR036892) - T[9-65] 7.46E-10 |
| Pfam |
L27_2 (IPR015132) - T[16-65] 3.8E-9 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[108-209] 4.34E-23 - T[221-331] 1.84E-24 - T[359-461] 2.5E-20 - T[527-629] 5.13E-18 - T[684-780] 5.65E-20 - T[1025-1107] 3.94E-12 - T[1172-1284] 8.41E-19 - T[1313-1405] 2.5E-19 - T[1436-1535] 5.26E-24 - T[1570-1666] 1.45E-26 |
| ProSiteProfiles |
PDZ (IPR001478) - T[120-207] 20.687 - T[249-330] 20.245 - T[372-462] 19.983 - T[539-625] 16.767 - T[694-766] 17.189 - T[1038-1106] 13.009 - T[1188-1286] 18.737 - T[1320-1404] 18.134 - T[1457-1536] 19.521 - T[1583-1666] 22.596 |
| Pfam |
PDZ (IPR001478) - T[122-203] 7.2E-14 - T[253-326] 2.0E-14 - T[378-458] 5.3E-12 - T[547-619] 1.2E-9 - T[695-770] 5.2E-9 - T[1039-1108] 1.0E-6 - T[1189-1276] 2.7E-12 - T[1322-1400] 3.5E-12 - T[1465-1532] 5.4E-13 - T[1584-1663] 2.6E-15 |
| SMART |
PDZ (IPR001478) - T[129-207] 9.2E-20 - T[257-330] 3.9E-19 - T[380-462] 1.6E-18 - T[549-625] 3.2E-16 - T[702-781] 7.8E-15 - T[1046-1120] 2.4E-4 - T[1197-1286] 1.9E-17 - T[1328-1404] 5.9E-14 - T[1465-1536] 4.4E-21 - T[1591-1666] 1.9E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MPDZ_HUMAN | 42.189 % | 590 | 4.35E-179 |
| INADL_HUMAN | 37.164 % | 428 | 1.28E-123 |
| DLG4_HUMAN | 30.27 % | 115 | 5.27E-26 |