- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C5.57.v5.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.57.v5.A.SL1-2
Possible name(s)
LNX2; MPDZ; PATJ
Gene model
Location
KhC5 [3,705,020 / 3,720,612]
Amino acid sequence
Length: 1,033
>KH.C5.57.v5.A.SL1-2
HLPEMPPMQNQVYESELPTPVNQFHPQSSVSDSDETDVETSPKNEQEQLNSAWEDEVTVI
ELEKGDRGLGFSILDFQDPLHEDKTAVLVRSLVDGGIAEQDGRLEPGDRLIFVNDKSLQF
ADLDQAVRVLKAVPQGRVLIGVTKPRPMFRVPPSSDSEDAVEEEEVRTPVLPRPPSVRSS
SSSSSSTSQEMQHYPMPSDSQYSASPVEMEVKLPGPPPPPPHIEPNPPTPEYEPPTPRYE
PPTPRYEPPAHHFEPPQPQIVSEPLQQSYEPPIQRYEPPQPQTPPESPPAAPHVIRTQSG
KYTVKDYNRPARLSSSETNPVTTANQKVEVKQVQMSGMTAIAVTANTIQRKEEPQQPIIR
QQEVFSSAPVVPPKPVGYTAPSWQTAEPEKPKPKPPIDGFERIVQMSKGKSSLGITVSPD
KEGDGLIVRSVITGGAVARAGEPNIGDMIRRVNNDSATGLGAAQARSLIRNHSAYSADVK
IAYIPKKYIEAFKLGLPVPEDSDVDEDRRTPKTPSRVDHFAALKSVFEMQNGQQPQDASK
FYLDSSLWGSTKRVDIRREAGQSLGISIVGGKNINANSQQQISLDNGDLIDGIFIKEIIE
GSPVDVNGEMKPGDKILKVDGVDLSNATHEGAVEAILKAGVHVVFHVQTFVGHPKQEPPP
PQPEEESEIVKAERKYGHLPGEIHVVEMVKGPAGVGLSLAGNKDRSQQQIFVVGVNPNGA
AGKDGRVKVGDQLLEINHVPLNQRNNHELASNVIKNAKSKLLFVINRQQKEARADKPLKK
TPSVESSSHRRQSSDVPAEKSPPPPKRSSSGGRHSPFSDVRVIKLVKDFQGLGFAISETP
TGIVVQSIAPGGTADRDGRLVRGDHILAVDDQSVSGVSYETAISILKQSRGTVKLTVASG
PVKSSASSDASSVTSSGHRLSTMSPTLDSGSENSDPLTCPIIPGRETTIEINKGKAGLGV
SIVGGSDSLLDAVLVHTVYEQGAAAKDGRLWPGDRILTVNNHSLRHATHDEAIEVLRNTP
GKVHLTILRDENR
Nucleotide sequence
Length: 3,386
>KH2012:KH.C5.57.v5.A.SL1-2
CACTTGCCTGAGATGCCACCAATGCAGAACCAAGTATATGAATCAGAGTTACCGACCCCA
GTCAACCAGTTCCATCCACAAAGTAGTGTTAGTGACAGCGATGAAACAGATGTGGAAACT
TCCCCAAAAAATGAGCAAGAACAGTTAAACAGTGCTTGGGAAGATGAAGTCACTGTTATT
GAACTTGAGAAGGGTGATCGGGGTCTGGGGTTTAGTATCCTGGATTTTCAGGACCCGTTA
CATGAAGACAAAACAGCAGTCCTTGTTCGGTCTTTAGTGGATGGGGGTATTGCGGAACAA
GATGGCCGACTTGAACCTGGTGATCGACTTATATTCGTTAACGATAAATCGCTTCAGTTT
GCCGACCTTGACCAGGCTGTCCGTGTTTTAAAGGCTGTACCACAAGGTCGTGTATTGATT
GGAGTAACTAAACCACGTCCAATGTTCAGAGTTCCACCAAGTTCTGACAGTGAAGATGCA
GTAGAAGAAGAGGAAGTAAGAACACCCGTTCTTCCACGACCTCCATCAGTCAGATCGTCT
TCCTCTTCATCATCTTCCACATCGCAGGAAATGCAGCATTACCCCATGCCCTCTGACTCC
CAGTATTCTGCCTCACCCGTTGAAATGGAAGTCAAACTACCGGGACCTCCACCCCCTCCA
CCCCATATTGAACCCAACCCTCCAACCCCAGAATACGAACCCCCAACACCCCGCTACGAG
CCCCCAACGCCTCGTTACGAGCCCCCAGCACACCATTTTGAGCCTCCGCAGCCCCAAATT
GTTTCCGAACCCCTACAACAATCTTACGAACCCCCAATCCAGCGTTACGAGCCCCCGCAG
CCCCAAACACCCCCTGAAAGCCCACCTGCTGCCCCCCATGTTATCCGCACTCAGTCAGGC
AAATACACAGTTAAAGATTACAACAGACCTGCGCGTTTGTCTTCATCAGAAACCAACCCT
GTCACCACTGCCAATCAAAAGGTTGAAGTGAAGCAAGTCCAGATGTCAGGCATGACAGCT
ATAGCAGTGACAGCAAACACAATACAACGCAAGGAAGAACCTCAACAACCTATTATCAGG
CAGCAAGAGGTGTTCTCATCTGCTCCAGTGGTCCCCCCAAAACCAGTGGGTTATACTGCC
CCCTCATGGCAGACAGCTGAACCTGAGAAACCGAAACCAAAACCTCCGATCGACGGGTTT
GAACGAATTGTTCAAATGTCAAAAGGAAAATCAAGTTTAGGTATTACTGTCTCACCTGAC
AAGGAAGGCGACGGTTTAATTGTTCGTTCCGTTATCACTGGAGGCGCTGTTGCACGGGCA
GGGGAGCCAAACATAGGGGACATGATTCGGCGTGTTAATAACGACTCAGCTACGGGATTA
GGGGCCGCTCAAGCACGCTCGCTAATCCGGAACCATTCAGCTTACAGCGCAGATGTCAAG
ATCGCCTACATCCCTAAAAAATACATTGAGGCATTCAAACTTGGACTTCCTGTTCCGGAG
GACTCAGATGTTGATGAAGATCGTCGGACACCGAAAACTCCATCAAGAGTTGATCATTTT
GCAGCACTTAAATCTGTATTTGAAATGCAAAATGGACAGCAACCTCAGGACGCTTCAAAG
TTTTATCTTGATTCCAGTTTGTGGGGTTCTACAAAGAGAGTTGACATACGTAGAGAAGCA
GGTCAATCACTTGGCATCAGTATTGTTGGCGGGAAAAATATCAATGCAAACTCACAGCAA
CAAATATCACTGGATAATGGGGACCTTATTGATGGAATCTTCATCAAAGAAATAATAGAA
GGAAGTCCAGTAGATGTGAATGGTGAAATGAAACCGGGCGACAAAATTTTAAAAGTTGAT
GGGGTTGATTTGAGTAACGCAACACACGAGGGAGCAGTGGAGGCAATATTAAAAGCGGGC
GTGCACGTTGTCTTTCATGTTCAAACGTTTGTCGGGCATCCAAAACAGGAACCTCCCCCA
CCCCAGCCAGAAGAAGAGTCAGAAATTGTGAAAGCAGAGCGGAAATATGGACATTTACCC
GGAGAAATTCACGTCGTGGAAATGGTGAAAGGCCCTGCTGGTGTTGGATTAAGCTTAGCT
GGGAATAAAGACAGGTCCCAACAACAGATATTTGTGGTTGGGGTTAACCCCAATGGAGCA
GCGGGTAAAGATGGGCGTGTCAAAGTGGGCGACCAACTACTGGAGATCAACCACGTTCCT
TTGAACCAACGTAACAACCACGAACTTGCGTCGAATGTGATCAAGAATGCAAAATCGAAA
CTTCTATTTGTGATCAATAGACAGCAGAAGGAAGCACGAGCTGATAAACCTCTAAAGAAA
ACTCCTTCAGTAGAATCCTCATCCCATAGGAGGCAGAGCTCTGATGTCCCCGCTGAGAAA
TCTCCTCCTCCTCCCAAACGCTCCAGCTCTGGAGGACGACATAGCCCATTTTCTGACGTC
AGAGTTATCAAGCTCGTAAAGGATTTCCAAGGATTAGGCTTTGCGATCTCTGAAACCCCT
ACTGGTATAGTGGTTCAATCCATTGCACCAGGTGGTACAGCAGATAGAGATGGTAGATTG
GTAAGAGGAGATCATATACTTGCTGTGGATGATCAGTCTGTTAGTGGAGTCTCTTATGAA
ACGGCGATCTCCATATTAAAGCAGTCAAGGGGAACAGTTAAACTTACTGTGGCATCTGGT
CCAGTCAAGTCTTCTGCTTCATCAGATGCCTCTTCTGTTACATCCTCCGGACACAGATTA
TCCACGATGTCCCCGACCCTGGATAGCGGGAGTGAGAACTCTGACCCACTTACGTGCCCG
ATTATTCCAGGCAGGGAAACAACCATAGAAATCAACAAAGGGAAGGCTGGACTTGGAGTG
AGCATTGTGGGAGGATCTGACAGTTTGTTGGATGCAGTGTTGGTGCACACAGTGTATGAA
CAAGGAGCTGCTGCAAAAGACGGAAGGTTATGGCCAGGTGACAGGATCTTAACAGTGAAC
AATCACAGTTTGCGTCATGCCACACATGACGAGGCAATCGAAGTATTGCGCAACACCCCG
GGGAAGGTCCACCTTACTATCCTACGTGATGAAAACAGGTGAAAAAAAAATTGTTGGTTT
TTTAAAACAAATCGAGAAAATTTCCTCTTTGCTGTTTTTGGAAAATATGTTGAAATAAAA
AAAGTATTTTTCTTGTTTTATTTCGGTGGAAAAAATATATGTCTTTGAAAAATATTTCTG
TGCATTGTTTGTTGTGTATTTCTTGGCAAAACCTATTAATTGTTTTATTTCATTAATTTA
AAATTGTGTTATTTTATTAATTCAACATGTACATGATTGTAAAGTTTCGGTGTGTAAAAT
AATAATAAAGTGTAAAACGTTTTGGA
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[49-145] 3.02E-20 - T[390-472] 2.1E-12 - T[537-649] 4.47E-19 - T[678-770] 1.31E-19 - T[801-900] 2.89E-24 - T[935-1031] 8.15E-27 |
| ProSiteProfiles |
PDZ (IPR001478) - T[59-131] 17.189 - T[403-471] 13.009 - T[553-651] 18.737 - T[685-769] 18.134 - T[822-901] 19.521 - T[948-1031] 22.596 |
| Pfam |
PDZ (IPR001478) - T[60-135] 2.7E-9 - T[404-473] 5.6E-7 - T[554-641] 1.5E-12 - T[687-765] 1.9E-12 - T[830-897] 3.0E-13 - T[949-1028] 1.4E-15 |
| SMART |
PDZ (IPR001478) - T[67-146] 7.8E-15 - T[411-485] 2.4E-4 - T[562-651] 1.9E-17 - T[693-769] 5.9E-14 - T[830-901] 4.4E-21 - T[956-1031] 1.9E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MPDZ_HUMAN | 47.493 % | 309 | 2.23E-87 |
| INADL_HUMAN | 31.104 % | 219 | 1.99E-58 |
| DLG4_HUMAN | 30.352 % | 115 | 2.51E-26 |