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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA69YH15' > 
  2. Transcript 'KH2012:KH.C5.57.v3.A...' > 
  3. Transcript 'KH2012:KH.C5.57.v6.A...'

Transcript Model

Transcript Id

KH2012:KH.C5.57.v6.A.SL1-1

Possible name(s)

LNX2; MPDZ; PATJ

Gene model

KH2012:KH.C5.57

Location

KhC5 [3,700,120 / 3,720,612]

Sequences

Amino acid sequence

Length: 1,371

>KH.C5.57.v6.A.SL1-1
HLPEMPPMQNQVYESELPTPVNQFHPQSSVSDSDETDVETSPKNEQEQLNSAWEDEVTVI
ELEKGDRGLGFSILDFQDPLHEDKTAVLVRSLVDGGIAEQDGRLEPGDRLIFVNDKSLQF
ADLDQAVRVLKAVPQGRVLIGVTKPRPMFRVPPSSDSEDAVEEEEVRTPVLPRPPSVRSS
SSSSSSTSQEMQHYPMPSDSQYSASPVEMEVKLPGPPPPPPHIEPNPPTPEYEPPTPRYE
PPTPRYEPPAHHFEPPQPQIVSEPLQQSYEPPIQRYEPPQPQTPPESPPAAPHVIRTQSG
KYTVKDYNRPARLSSSETNPVTTANQKVEVKQVQMSGMTAIAVTANTIQRKEEPQQPIIR
QQEVFSSAPVVPPKPVGYTAPSWQTAEPEKPKPKPPIDGFERIVQMSKGKSSLGITVSPD
KEGDGLIVRSVITGGAVARAGEPNIGDMIRRVNNDSATGLGAAQARSLIRNHSAYSADVK
IAYIPKKYIEAFKLGLPVPEDSDVDEDRRTPKTPSRVDHFAALKSVFEMQNGQQPQDASK
FYLDSSLWGSTKRVDIRREAGQSLGISIVGGKNINANSQQQISLDNGDLIDGIFIKEIIE
GSPVDVNGEMKPGDKILKVDGVDLSNATHEGAVEAILKAGVHVVFHVQTFVGHPKQEPPP
PQPEEESEIVKAERKYGHLPGEIHVVEMVKGPAGVGLSLAGNKDRSQQQIFVVGVNPNGA
AGKDGRVKVGDQLLEINHVPLNQRNNHELASNVIKNAKSKLLFVINRQQKEARADKPLKK
TPSVESSSHRRQSSDVPAEKSPPPPKRSSSGGRHSPFSDVRVIKLVKDFQGLGFAISETP
TGIVVQSIAPGGTADRDGRLVRGDHILAVDDQSVSGVSYETAISILKQSRGTVKLTVASG
PVKSSASSDASSVTSSGHRLSTMSPTLDSGSENSDPLTCPIIPGRETTIEINKGKAGLGV
SIVGGSDSLLDAVLVHTVYEQGAAAKDGRLWPGDRILTVNNHSLRHATHDEAIEVLRNTP
GKVHLTILRDENRETINNESESDIYDIYDVNLMKKSGRGLGLSIVGRKNAAGVFVSDLVQ
GGAAARDGTMKPGDQILSVNGVNIRMAGQEVAAQLLKNAQGKVDLRIGRLKSGAPSDLIK
MPKLSLSSNASEDAPKSPTDDLGGDIRFVEIDKTPTQPLGISIAGGVGSPLGDVPIFVAV
VQNHGAAAGKLKVGDRIRSINGQTTDNKSHDEVVAMLKGQDDAIVLMQVQEGGESIKQLS
EYLVQSAKPNLPISGQQGSQEKKEIDIELNRGSDGLGFSIVGGHGSPHGDLPIYVKSVFS
VGAAAVDGRLRRGDRIVSVNGEKLDGYTHEEAAEALKRRATRIILRVVPST

Nucleotide sequence

Length: 4,466

>KH2012:KH.C5.57.v6.A.SL1-1
CACTTGCCTGAGATGCCACCAATGCAGAACCAAGTATATGAATCAGAGTTACCGACCCCA
GTCAACCAGTTCCATCCACAAAGTAGTGTTAGTGACAGCGATGAAACAGATGTGGAAACT
TCCCCAAAAAATGAGCAAGAACAGTTAAACAGTGCTTGGGAAGATGAAGTCACTGTTATT
GAACTTGAGAAGGGTGATCGGGGTCTGGGGTTTAGTATCCTGGATTTTCAGGACCCGTTA
CATGAAGACAAAACAGCAGTCCTTGTTCGGTCTTTAGTGGATGGGGGTATTGCGGAACAA
GATGGCCGACTTGAACCTGGTGATCGACTTATATTCGTTAACGATAAATCGCTTCAGTTT
GCCGACCTTGACCAGGCTGTCCGTGTTTTAAAGGCTGTACCACAAGGTCGTGTATTGATT
GGAGTAACTAAACCACGTCCAATGTTCAGAGTTCCACCAAGTTCTGACAGTGAAGATGCA
GTAGAAGAAGAGGAAGTAAGAACACCCGTTCTTCCACGACCTCCATCAGTCAGATCGTCT
TCCTCTTCATCATCTTCCACATCGCAGGAAATGCAGCATTACCCCATGCCCTCTGACTCC
CAGTATTCTGCCTCACCCGTTGAAATGGAAGTCAAACTACCGGGACCTCCACCCCCTCCA
CCCCATATTGAACCCAACCCTCCAACCCCAGAATACGAACCCCCAACACCCCGCTACGAG
CCCCCAACGCCTCGTTACGAGCCCCCAGCACACCATTTTGAGCCTCCGCAGCCCCAAATT
GTTTCCGAACCCCTACAACAATCTTACGAACCCCCAATCCAGCGTTACGAGCCCCCGCAG
CCCCAAACACCCCCTGAAAGCCCACCTGCTGCCCCCCATGTTATCCGCACTCAGTCAGGC
AAATACACAGTTAAAGATTACAACAGACCTGCGCGTTTGTCTTCATCAGAAACCAACCCT
GTCACCACTGCCAATCAAAAGGTTGAAGTGAAGCAAGTCCAGATGTCAGGCATGACAGCT
ATAGCAGTGACAGCAAACACAATACAACGCAAGGAAGAACCTCAACAACCTATTATCAGG
CAGCAAGAGGTGTTCTCATCTGCTCCAGTGGTCCCCCCAAAACCAGTGGGTTATACTGCC
CCCTCATGGCAGACAGCTGAACCTGAGAAACCGAAACCAAAACCTCCGATCGACGGGTTT
GAACGAATTGTTCAAATGTCAAAAGGAAAATCAAGTTTAGGTATTACTGTCTCACCTGAC
AAGGAAGGCGACGGTTTAATTGTTCGTTCCGTTATCACTGGAGGCGCTGTTGCACGGGCA
GGGGAGCCAAACATAGGGGACATGATTCGGCGTGTTAATAACGACTCAGCTACGGGATTA
GGGGCCGCTCAAGCACGCTCGCTAATCCGGAACCATTCAGCTTACAGCGCAGATGTCAAG
ATCGCCTACATCCCTAAAAAATACATTGAGGCATTCAAACTTGGACTTCCTGTTCCGGAG
GACTCAGATGTTGATGAAGATCGTCGGACACCGAAAACTCCATCAAGAGTTGATCATTTT
GCAGCACTTAAATCTGTATTTGAAATGCAAAATGGACAGCAACCTCAGGACGCTTCAAAG
TTTTATCTTGATTCCAGTTTGTGGGGTTCTACAAAGAGAGTTGACATACGTAGAGAAGCA
GGTCAATCACTTGGCATCAGTATTGTTGGCGGGAAAAATATCAATGCAAACTCACAGCAA
CAAATATCACTGGATAATGGGGACCTTATTGATGGAATCTTCATCAAAGAAATAATAGAA
GGAAGTCCAGTAGATGTGAATGGTGAAATGAAACCGGGCGACAAAATTTTAAAAGTTGAT
GGGGTTGATTTGAGTAACGCAACACACGAGGGAGCAGTGGAGGCAATATTAAAAGCGGGC
GTGCACGTTGTCTTTCATGTTCAAACGTTTGTCGGGCATCCAAAACAGGAACCTCCCCCA
CCCCAGCCAGAAGAAGAGTCAGAAATTGTGAAAGCAGAGCGGAAATATGGACATTTACCC
GGAGAAATTCACGTCGTGGAAATGGTGAAAGGCCCTGCTGGTGTTGGATTAAGCTTAGCT
GGGAATAAAGACAGGTCCCAACAACAGATATTTGTGGTTGGGGTTAACCCCAATGGAGCA
GCGGGTAAAGATGGGCGTGTCAAAGTGGGCGACCAACTACTGGAGATCAACCACGTTCCT
TTGAACCAACGTAACAACCACGAACTTGCGTCGAATGTGATCAAGAATGCAAAATCGAAA
CTTCTATTTGTGATCAATAGACAGCAGAAGGAAGCACGAGCTGATAAACCTCTAAAGAAA
ACTCCTTCAGTAGAATCCTCATCCCATAGGAGGCAGAGCTCTGATGTCCCCGCTGAGAAA
TCTCCTCCTCCTCCCAAACGCTCCAGCTCTGGAGGACGACATAGCCCATTTTCTGACGTC
AGAGTTATCAAGCTCGTAAAGGATTTCCAAGGATTAGGCTTTGCGATCTCTGAAACCCCT
ACTGGTATAGTGGTTCAATCCATTGCACCAGGTGGTACAGCAGATAGAGATGGTAGATTG
GTAAGAGGAGATCATATACTTGCTGTGGATGATCAGTCTGTTAGTGGAGTCTCTTATGAA
ACGGCGATCTCCATATTAAAGCAGTCAAGGGGAACAGTTAAACTTACTGTGGCATCTGGT
CCAGTCAAGTCTTCTGCTTCATCAGATGCCTCTTCTGTTACATCCTCCGGACACAGATTA
TCCACGATGTCCCCGACCCTGGATAGCGGGAGTGAGAACTCTGACCCACTTACGTGCCCG
ATTATTCCAGGCAGGGAAACAACCATAGAAATCAACAAAGGGAAGGCTGGACTTGGAGTG
AGCATTGTGGGAGGATCTGACAGTTTGTTGGATGCAGTGTTGGTGCACACAGTGTATGAA
CAAGGAGCTGCTGCAAAAGACGGAAGGTTATGGCCAGGTGACAGGATCTTAACAGTGAAC
AATCACAGTTTGCGTCATGCCACACATGACGAGGCAATCGAAGTATTGCGCAACACCCCG
GGGAAGGTCCACCTTACTATCCTACGTGATGAAAACAGGGAGACAATTAACAATGAATCA
GAGTCCGATATATATGATATCTATGATGTAAATTTAATGAAGAAAAGTGGGCGAGGTCTC
GGACTTAGCATTGTTGGAAGAAAAAACGCAGCTGGTGTGTTTGTGAGTGACCTTGTACAG
GGTGGTGCAGCAGCAAGAGATGGAACAATGAAACCTGGAGATCAAATACTAAGTGTTAAT
GGCGTCAATATAAGGATGGCTGGACAAGAAGTAGCTGCACAATTGCTGAAGAATGCTCAG
GGCAAAGTCGATCTCAGGATCGGAAGATTAAAGTCCGGAGCTCCTTCTGATCTCATAAAG
ATGCCAAAGCTAAGTCTCAGTTCCAATGCATCTGAAGATGCTCCTAAGAGTCCCACTGAT
GATTTGGGAGGAGACATCCGATTCGTGGAGATCGATAAGACCCCCACCCAACCACTTGGC
ATCAGTATAGCAGGTGGAGTTGGTTCTCCTTTAGGGGATGTTCCCATTTTTGTAGCAGTT
GTTCAAAACCATGGGGCAGCGGCAGGAAAGTTGAAGGTTGGGGACAGAATACGAAGCATT
AATGGACAGACTACAGATAACAAGTCACATGATGAAGTGGTAGCAATGCTGAAGGGTCAG
GATGACGCTATTGTTCTAATGCAGGTGCAAGAAGGTGGGGAAAGTATAAAACAACTAAGT
GAATATCTTGTACAATCTGCCAAACCTAATTTACCAATCAGTGGACAACAAGGAAGCCAA
GAAAAGAAGGAAATAGACATCGAGTTGAACCGGGGGTCTGATGGACTTGGTTTTAGTATC
GTTGGAGGGCATGGATCACCACATGGGGATCTTCCTATTTATGTGAAGTCTGTGTTCTCA
GTTGGAGCAGCAGCAGTGGATGGGAGGTTACGTAGGGGGGATCGGATTGTATCCGTGAAC
GGCGAGAAATTGGACGGTTATACGCATGAGGAAGCGGCCGAGGCTCTCAAACGAAGAGCA
ACCCGTATCATACTTCGTGTAGTTCCGTCCACATAACTCATCACACAGCCAACCCATCTT
CAGTGTCAAACCTTGTACATTTTTTCATATTTTAAGTATTAATAATCATTTAATTTAATA
ATGATGTATACGTTTGTTCGTATGCTGGCCATTGTCTTTATTATTCATATTTGTATTCAG
CGGACTCTTATTATTTTTTACTAACACCACAATTTTGTATCCAGGTATATAAAACAACGA
GATAGAATATCTGTTTTTTTCTTCATGTAAAACTCGTATTCGTATTGCAGTGTATTCTCT
CAATCAAGTATTTTTATGCGGAATCCAGTCCGTTGCGTGTATCACTTAATAAATAACACA
CCATGTGCCATTTGTATGCATTATGT

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[49-145] 4.47E-20 - T[390-472] 3.15E-12 - T[537-649] 6.57E-19 - T[678-770] 1.97E-19 - T[801-900] 4.07E-24 - T[935-1032] 8.81E-27 - T[1046-1130] 9.99E-22 - T[1160-1255] 3.42E-21 - T[1272-1369] 3.42E-25
ProSiteProfiles
PDZ (IPR001478) - T[59-131] 17.189 - T[403-471] 13.009 - T[553-651] 18.737 - T[685-769] 18.134 - T[822-901] 19.521 - T[948-1031] 22.596 - T[1049-1131] 21.913 - T[1168-1252] 17.772 - T[1286-1371] 21.31
Pfam
PDZ (IPR001478) - T[60-135] 4.1E-9 - T[404-473] 7.9E-7 - T[554-641] 2.1E-12 - T[687-765] 2.7E-12 - T[830-897] 4.3E-13 - T[949-1028] 2.0E-15 - T[1050-1127] 2.2E-17 - T[1171-1245] 1.5E-13 - T[1286-1359] 1.3E-14
SMART
PDZ (IPR001478) - T[67-146] 7.8E-15 - T[411-485] 2.4E-4 - T[562-651] 1.9E-17 - T[693-769] 5.9E-14 - T[830-901] 4.4E-21 - T[956-1031] 1.9E-22 - T[1058-1131] 1.9E-20 - T[1177-1252] 4.4E-13 - T[1294-1371] 2.1E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MPDZ_HUMAN 46.649 % 567 2.2E-173
INADL_HUMAN 44.444 % 306 6.13E-85
LNX2_HUMAN 34.557 % 228 4.94E-63