- Transcript 'KH2012:KH.C7.157.v1....' >
- Transcript 'KH2012:KH.C5.581.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.581.v1.A.ND2-1
Possible name(s)
TIMP2; TIMP3; TIMP4
Gene model
Location
KhC5 [3,365,326 / 3,369,829]
Amino acid sequence
Length: 504
>KH.C5.581.v1.A.ND2-1
VSLLLIGVVDMKVCVILFVALVAILATLRLTEACSCSPEHPQHLFCKSDYVVKVLIMSKK
DVIIEEDGTIIDIEPEKEELPEKDVTLLPEDFEEVPTTTYPPETAAPAPVQGEVPEEQGG
EVEEPTADEVGGEAENPIVEEVGGEQPRGNQTEGLPEEDEVVITDISEVASDQPAVKEEA
SEDPGTGREIVWPHISTSSEQRVPIVGPIETQPSGGAEVPQPVVPELVVVDDVTQDGEEV
LVSPDDVNGAESAASIRVPRYAYRHLGPDGAMPGSKRFFVGIRGKPLGLVAQDAAPGSAS
QNQLSSRNKRNIIRRNAPPGLIRPSNEIPSVRLNPNDFTIRVRMHTQYKIRIMKVFKGDV
SNDTMYLYTPPSSSLCRMHLNLKTPYVIMGSIRDGRLHVSYCNYKIDASTLKRVELRHLT
STIKHRFTKACRDCRVNICNNEPCPEMSKVAGECNWRNIYTLRHRKANEFACVRKKSGKC
DWFNALHPNMRPDDLDEEGAVDSP
Nucleotide sequence
Length: 1,830
>KH2012:KH.C5.581.v1.A.ND2-1
GTGTCCCTACTATTAATAGGTGTTGTAGACATGAAAGTGTGTGTGATTCTATTCGTTGCC
TTGGTCGCTATTCTTGCAACCCTGCGTTTAACTGAGGCATGTTCATGTAGTCCTGAACAT
CCACAACACTTGTTCTGCAAATCAGACTATGTTGTTAAAGTTTTGATAATGAGCAAGAAA
GATGTCATAATTGAAGAAGATGGAACAATTATTGATATAGAGCCTGAAAAGGAAGAACTT
CCGGAGAAAGATGTCACTTTATTACCGGAAGATTTTGAAGAAGTTCCAACGACGACATAC
CCGCCGGAGACTGCAGCCCCTGCTCCTGTACAAGGAGAAGTCCCGGAGGAGCAGGGAGGA
GAAGTGGAAGAACCAACTGCAGATGAAGTGGGAGGAGAAGCGGAAAATCCAATTGTAGAG
GAGGTGGGAGGAGAACAGCCGAGAGGAAATCAGACAGAAGGACTCCCGGAAGAAGATGAA
GTAGTCATCACCGATATCTCAGAGGTGGCTTCGGATCAACCTGCAGTGAAGGAAGAAGCT
TCAGAAGATCCAGGAACGGGAAGAGAAATCGTTTGGCCTCATATAAGTACAAGCAGTGAG
CAACGTGTGCCGATCGTCGGACCAATCGAAACACAGCCATCAGGTGGCGCCGAAGTGCCT
CAACCGGTTGTGCCGGAGTTGGTGGTTGTTGATGACGTCACACAAGACGGGGAGGAGGTT
TTAGTTAGCCCCGATGACGTCAATGGTGCTGAATCTGCAGCCTCAATTCGTGTGCCAAGA
TACGCGTATAGGCATCTTGGACCAGATGGTGCAATGCCAGGAAGCAAACGGTTTTTTGTT
GGAATTAGAGGCAAGCCACTGGGACTGGTGGCGCAGGATGCGGCCCCTGGTTCAGCGTCT
CAAAATCAACTTTCAAGCCGAAACAAGAGAAATATTATCCGCAGAAATGCACCACCTGGT
TTGATTCGGCCGTCTAATGAAATACCATCGGTTCGTCTCAACCCAAACGACTTTACAATA
CGTGTTAGAATGCACACTCAATATAAAATACGCATTATGAAGGTATTTAAAGGTGACGTC
AGCAACGATACAATGTATCTTTACACACCGCCGTCTAGCTCCCTCTGCAGGATGCATTTG
AATTTAAAAACACCTTACGTTATAATGGGAAGCATAAGAGATGGGAGACTTCACGTTAGC
TACTGTAATTACAAGATCGACGCCTCAACGTTGAAACGTGTTGAGTTACGCCACCTTACA
AGTACAATCAAACACAGGTTCACAAAAGCTTGCAGAGACTGCCGTGTGAATATATGCAAC
AACGAGCCGTGCCCAGAAATGTCGAAAGTTGCCGGCGAATGCAACTGGCGGAATATATAC
ACTCTGCGACATAGAAAAGCCAACGAGTTTGCCTGTGTCCGAAAAAAGTCGGGAAAATGC
GACTGGTTCAACGCTCTTCACCCTAACATGAGGCCCGACGACTTGGACGAGGAAGGCGCA
GTCGATTCGCCATGATAGCAAAATTTAGGAGAAAAGACTATTAACTACTTGCAGCCGCCT
ACAACCCGGAATTTTTACTACCATAGATTCTCCTAATAAGAATACCAGTGTTTTACACGC
ATTACTATATGCCACGAGCTTGCTTTATACATTAGAACGTTGTATATACAAAACTACACA
TCGTATTATATGTACACATCTTCAAACCGTTAACTATAACATCAATTCCAACACATCGCT
TTGCTGTATAACTGAAATATCGAGCACCGTACAAGACATTCATGTTACACATGTACAAAT
TTTTCTCCAATAAAAGATGTAAAAACTGTA
| PANTHER |
TIMP (IPR001820) - T[11-311] 1.4E-58 - T[318-486] 1.4E-58 |
| Pfam |
TIMP (IPR001820) - T[32-66] 3.0E-9 - T[335-482] 3.7E-23 |
| ProSitePatterns |
TIMP_CS (IPR030490) - T[34-46] . |
| SUPERFAMILY |
TIMP-like_OB-fold (IPR008993) - T[34-70] 2.2E-8 - T[336-484] 5.18E-27 |
| SMART |
TIMP (IPR001820) - T[337-482] 1.6E-8 |
| Gene3D |
TIMP_C (IPR027465) - T[411-486] 1.8E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TIMP2_HUMAN | 31.081 % | 79.3 | 6.25E-17 |