Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,138

>KH.C5.599.v1.R.ND1-1
QSACINNMVEPVPEKLDFPKEEEKILAIWKEIDAFKTSLKQSKGKPRYAFYDGPPFATGL
PHYGHILAGTIKDIVTRFAHQSGFHVDRKFGWDCHGLPVEYEIDKSLGIKGPEDVAKIGI
AEYNRQCRSIVMRYASQWELIVNRLGRWIDFENDYKTLYPWFMESVWWVFKQLFDKGFVY
RGFKVMPFSTGCHTPLSNFEANQNYKDVNDPAVIISFPLVKDPNVKLIAWTTTPWTLPSN
LALCVNPKMTYVKVEDQATGSVYILMEARLVALYKNESEYKVIEKMVGSALFGLKYIPVF
NYFESLKETAFKVLTDTYVTDDSGTGVVHQAPYFGADDYRVCLANNVFKKDGIPICPVDA
SGKFTSDVTDFQGMYVKDADKHICKHLKQNNRLVHQSTTKHNYPFCWRSDTPLIYKAVPS
WFIRVENITDKLLENNAQCYWVPDFIKEKRFANWLRDAHDWAVSRNRYWGTPIPIWVSED
LEEIVCIGSIDELAQLSGVRVTDLHRESVDDITIPSRMGKGVLRRIPEVFDCWFESGAMP
YAQLHYPFENKKEFEEGFPADFIAEGIDQTRGWFYTLLVLSTGLFGKPPFKNLIVNGLVL
ASDGQKMSKRKKNYPDPMEIISQYGADALRLYLINSPVVRAENLRFQSNGVRDILKDVFL
PWYNAYRFLIQNIIRLEKEESATFSYKDEDLGSSSNIMDQWILSSMQSLLQFVKQEMHGY
KLYTVVPKLVRFVELLTNWYVRSNRKRLKGDGGLEDCQKALQTLFSVIFTITRTMAPFTP
FLTEQMYQNLRRIIPHLQSDDCRSIHYLMLPQPKESLINVKIEKAVSRMQTVIELARVIR
DRKTMPTKYPLPELVVIHKDPEYLADVVSLQSYVTDELNVRNVTTSSDKVKYGVKLRAEP
DHVALGKRLKGDFKKMMAAIQKLTDVQVEDFISSGSIQLMGHVLKTGDIRVIYQFGKENS
QYEAHTDNDVLVLLDVTPDQSMLDEGVAREVVNRIQKLRKKVGVASFITVYYDVRGSDNY
LRDITEKHGSNISSNIKSPFKQHPIPPSDIIINETMQLKGSELELTLVRGHEESTNGPMC
KYLNVQIRSNGLLTGDQCKNLHAHTSMSNLQKENVVMEIPELFYWKILFNQIQSHFIN

Nucleotide sequence

Length: 3,943

>KH2012:KH.C5.599.v1.R.ND1-1
AGTTCAGGTTTGTGCAAACATTTTCTGAACTAGCAAAGTGCTTGTATTAACAATATGGTT
GAACCAGTGCCAGAAAAGTTAGATTTCCCAAAAGAGGAAGAAAAAATTCTTGCAATTTGG
AAAGAAATAGATGCTTTTAAAACATCATTGAAACAATCAAAAGGAAAACCAAGGTATGCA
TTCTATGATGGACCTCCATTTGCAACTGGACTTCCCCACTATGGTCATATTTTGGCAGGA
ACCATTAAGGATATTGTAACACGATTTGCTCATCAGAGTGGATTTCATGTGGATCGTAAA
TTTGGATGGGATTGTCATGGACTGCCTGTGGAATATGAAATTGACAAATCACTTGGCATC
AAAGGACCAGAAGATGTTGCAAAGATTGGAATTGCTGAATATAATCGACAATGTAGATCT
ATTGTGATGCGATATGCTTCACAATGGGAGCTCATAGTAAATCGTCTGGGTCGATGGATT
GATTTTGAAAACGATTACAAAACATTATATCCTTGGTTTATGGAGTCAGTATGGTGGGTC
TTCAAACAACTGTTTGACAAAGGCTTTGTGTACAGAGGGTTTAAAGTCATGCCGTTTTCA
ACCGGCTGTCACACTCCTCTATCAAACTTTGAAGCAAATCAGAATTACAAAGATGTTAAT
GACCCTGCAGTGATCATTAGCTTTCCATTGGTAAAAGATCCAAATGTAAAGTTGATTGCA
TGGACAACCACACCATGGACGTTACCAAGTAACCTTGCTTTGTGTGTCAATCCTAAAATG
ACATATGTCAAGGTTGAAGATCAAGCTACAGGCAGTGTTTATATTCTCATGGAAGCGAGA
TTGGTTGCATTGTATAAAAATGAATCTGAATACAAAGTAATTGAGAAAATGGTTGGATCT
GCTTTATTTGGCTTAAAGTATATTCCTGTGTTCAATTACTTTGAAAGTCTGAAGGAAACT
GCTTTTAAAGTGTTAACAGACACTTATGTAACGGACGATAGTGGTACGGGTGTTGTTCAC
CAAGCTCCCTACTTTGGCGCGGACGACTACCGTGTTTGCTTGGCAAACAACGTGTTTAAG
AAAGATGGAATTCCCATTTGTCCCGTGGATGCAAGTGGAAAGTTTACAAGTGATGTCACA
GATTTCCAGGGAATGTATGTTAAGGATGCTGACAAGCATATATGCAAACACCTGAAGCAG
AACAATCGTTTAGTGCATCAGAGCACCACTAAGCATAACTATCCATTCTGCTGGAGATCT
GACACACCACTCATTTATAAAGCTGTTCCAAGCTGGTTCATCAGGGTGGAAAACATTACG
GATAAATTATTGGAAAATAATGCTCAGTGTTATTGGGTACCTGATTTTATAAAAGAAAAG
CGCTTTGCAAATTGGTTGCGAGACGCCCATGACTGGGCAGTATCAAGGAACCGATACTGG
GGAACCCCCATCCCGATATGGGTGAGTGAAGACTTGGAGGAAATTGTTTGTATCGGGTCG
ATCGATGAACTTGCTCAACTCAGTGGGGTTCGTGTAACTGACTTGCACAGAGAAAGTGTT
GATGATATCACCATACCATCACGCATGGGTAAAGGGGTTTTACGTCGTATTCCAGAAGTA
TTTGATTGTTGGTTTGAAAGTGGAGCAATGCCGTACGCCCAACTTCATTATCCTTTTGAG
AACAAGAAAGAATTTGAGGAGGGATTTCCAGCAGACTTCATCGCTGAAGGGATTGACCAG
ACCAGGGGTTGGTTTTACACGTTGCTGGTTCTTTCAACTGGTTTATTTGGAAAACCTCCG
TTCAAAAATCTAATTGTGAATGGGCTTGTACTGGCAAGTGATGGGCAAAAGATGAGCAAA
CGTAAGAAAAACTACCCAGACCCGATGGAAATTATATCTCAGTATGGTGCAGATGCTCTT
CGCTTATATCTTATCAATTCTCCAGTAGTTCGAGCTGAAAACCTTAGGTTTCAGTCTAAT
GGTGTTCGTGATATTTTGAAAGATGTCTTCTTGCCCTGGTATAATGCATATAGGTTCCTT
ATTCAAAACATTATCAGATTAGAAAAAGAAGAGAGTGCCACTTTTTCTTACAAAGATGAA
GATCTTGGATCATCCAGCAACATCATGGATCAGTGGATCCTCTCATCCATGCAAAGTCTT
CTTCAGTTTGTCAAGCAGGAGATGCATGGTTACAAGTTGTACACTGTTGTTCCAAAACTT
GTACGTTTTGTTGAGTTACTTACCAACTGGTATGTGCGATCAAATAGAAAAAGATTGAAG
GGTGATGGGGGTTTGGAAGATTGCCAGAAAGCTTTACAGACTTTGTTCAGTGTCATATTT
ACCATCACCCGAACTATGGCACCGTTCACACCTTTCCTTACTGAACAAATGTATCAGAAC
CTACGTCGGATTATTCCACATTTACAATCGGATGATTGTAGGAGTATCCATTACTTGATG
CTGCCTCAACCAAAGGAAAGTTTAATCAATGTAAAGATAGAGAAAGCAGTCTCGCGAATG
CAAACGGTGATTGAGCTTGCAAGAGTTATTCGGGATCGAAAAACCATGCCAACTAAGTAC
CCCCTTCCTGAGCTAGTGGTGATCCATAAAGATCCTGAATACCTTGCTGATGTTGTAAGT
TTGCAAAGTTACGTAACGGATGAATTAAATGTCCGTAATGTGACAACATCTTCAGATAAA
GTGAAATATGGAGTCAAACTCCGTGCAGAGCCGGATCATGTTGCTTTGGGGAAAAGGTTA
AAGGGTGACTTTAAGAAAATGATGGCAGCTATACAGAAACTTACTGATGTACAGGTTGAA
GACTTTATATCTTCTGGTTCAATTCAACTTATGGGACATGTTCTTAAAACAGGAGATATT
CGAGTCATATATCAGTTTGGAAAAGAGAATTCACAGTACGAAGCACACACAGACAATGAT
GTGTTGGTATTGTTGGACGTTACACCTGATCAGTCTATGTTAGATGAAGGTGTAGCAAGA
GAAGTGGTTAACAGGATCCAAAAACTTCGTAAAAAGGTAGGAGTTGCTTCATTTATCACC
GTATATTATGATGTCAGAGGTTCAGATAATTACCTTCGTGACATCACAGAGAAGCATGGA
AGTAATATATCAAGCAACATCAAGTCACCATTTAAACAACACCCAATCCCTCCTTCTGAC
ATCATAATCAATGAGACCATGCAGTTAAAAGGAAGTGAATTGGAACTCACATTGGTTCGA
GGTCATGAGGAATCCACTAATGGGCCGATGTGTAAATATTTAAATGTTCAAATTAGGTCA
AATGGACTTCTTACAGGTGACCAATGCAAGAACTTGCATGCCCATACATCAATGTCAAAT
TTGCAAAAGGAGAATGTTGTAATGGAAATACCGGAGTTGTTTTATTGGAAAATCCTGTTC
AATCAAATCCAATCTCACTTCATCAATTAAAAGAACAAACTAAAGTACTATTTGGACAAC
GTGGAAAATCCCTCAAATTGTTTGCTGGTCCAGATCTTTCAACAGAGTTAGAATCCATGG
AAGAATTATTGAGACAGAAAATTGTTTTTGCTGCAGTTTAAGGGGGAATATTCAAAAGAT
ACATTTTTTGCAACTTTTTTAAAACTAAAAATGTTGTGTATTTAGAATATTTTTCTCTTG
AAGTTCATTTATAGTGTTTTGCATTGGCAAAACACATTAGTTCAATTATTGTATAGTTTT
TGAAACTGTTCATTGCAATCATTGTTTCTCTGAACAAAATGATAGAAACTGTTGCCATTT
ACAATTTATAAATTCCAACTTTTTCTCTTATGTAAGGACTGTCAGTTTAAACTCGGTGGC
AATATGGTAGTTAAGTGGTGTTTGGATAATATAAGAAGTTGTTTTTGAAGAAAAGTCGAC
AGTAGATCGGTCAAATTATTATGTGTCAAATGTTTCCTTACAA

InterProScan

Hamap	Ile-tRNA-ligase_type2 (IPR023586) - T[10-1069] 12.705
TIGRFAM	Ile-tRNA-ligase (IPR002301) - T[12-864] 3.0E-289
Gene3D	Rossmann-like_a/b/a_fold (IPR014729) - T[22-203] 9.4E-240 - T[408-632] 9.4E-240
Pfam	aa-tRNA-synth_Ia (IPR002300) - T[25-644] 5.7E-235
PRINTS	Ile-tRNA-ligase (IPR002301) - T[48-59] 9.7E-31 - T[228-251] 9.7E-31 - T[401-416] 9.7E-31 - T[525-538] 9.7E-31 - T[565-574] 9.7E-31
ProSitePatterns	aa-tRNA-synth_I_CS (IPR001412) - T[55-66] .
Gene3D	Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[204-407] 9.4E-240
SUPERFAMILY	Val/Leu/Ile-tRNA-synth_edit (IPR009008) - T[206-403] 4.92E-48
CDD	Anticodon_Ile_ABEc (IPR033709) - T[646-837] 3.28384E-85
SUPERFAMILY	tRNAsynth_Ia_anticodon-bd (IPR009080) - T[661-916] 1.1E-44
Pfam	M/V/L/I-tRNA-synth_anticd-bd (IPR013155) - T[699-851] 8.8E-24