- Transcript 'KH2012:KH.C5.42.v1.A...' >
- Transcript 'KH2012:KH.C5.641.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.641.v1.A.ND1-1
Possible name(s)
NFIA; NFIB; NFIX
Gene model
Location
KhC5 [1,824,592 / 1,836,657]
Amino acid sequence
Length: 548
>KH.C5.641.v1.A.ND1-1
MLAYDTPPYSFCSIQDEFHPFIEALMPHVKSFAYTWFNLQARKRKYFKKHEKRMSPSEEQ
AVKEELLREKPEVKQKWASRLLAKLRKDIRPEYREDFVLTITGKKSVCCILSNPDQKGKI
RRIDCLRQADKVWRLDLVMIILFRGLPLESTDGERLCKSHACGQNAGLCVQPYHISVTVK
ELDLYLANYVKDEGANDDKEDSLREDICKVVGATRAFKTSGVFGVHEIYRIAKTPIISSD
IHNIGMGNSIESSSYYYASHHHDNRVPPPSPLVIRQQPGHSQTKRLKSSGSSMSAEEVNG
IESGGENDAETFYNRPPSSHHSWHGSPLQSPTIKTTRAQPDLNGGHSSVTSPGSGGNEML
PPSTPGSTSGPVSAFPRLQGSHSSPWHPVLQQSHHFPYGATQSFYHPRQDLKDFAQFACL
SAEAAKHTPSQILSYHPHSVSHMALGQSGLSGATTRPSIHQQQTSPHDAAAERWSHGQVE
NQSADYHPMLSNERLQSVVPGLNPDEALVAEDRLFPPIPGAMMDQSRNSAGGVSSQSSNQ
SAPLSNKE
Nucleotide sequence
Length: 2,697
>KH2012:KH.C5.641.v1.A.ND1-1
ATGTTGGCCTATGATACGCCACCTTACTCGTTTTGTTCCATCCAGGACGAATTTCACCCC
TTCATTGAAGCACTGATGCCACACGTAAAGAGCTTCGCATACACATGGTTCAACCTACAA
GCGCGAAAACGAAAATATTTCAAAAAACACGAAAAGCGGATGAGTCCCTCGGAGGAGCAG
GCCGTCAAAGAGGAACTCCTCCGAGAAAAACCGGAGGTGAAACAAAAATGGGCCTCTCGT
CTTCTCGCAAAGCTGAGGAAAGACATTCGACCAGAATACAGGGAAGATTTCGTTTTAACC
ATCACTGGCAAGAAGTCGGTTTGTTGCATTTTATCCAATCCTGACCAGAAAGGAAAAATC
CGTAGAATTGATTGTCTTCGACAAGCCGATAAGGTTTGGAGACTTGACTTGGTGATGATT
ATCCTGTTTCGGGGACTTCCCCTCGAGTCGACTGACGGAGAACGCTTGTGCAAGTCACAT
GCTTGCGGACAGAATGCTGGCCTTTGTGTGCAACCTTATCATATTAGTGTTACTGTAAAG
GAGCTGGACCTGTACCTTGCTAATTACGTCAAAGACGAAGGGGCAAATGACGACAAAGAA
GACTCGTTAAGAGAAGATATTTGTAAAGTTGTCGGAGCAACTCGAGCATTCAAAACAAGT
GGTGTTTTCGGAGTCCATGAGATTTACCGAATCGCTAAAACCCCAATAATCAGCAGTGAC
ATACATAATATTGGGATGGGAAACTCAATAGAAAGTTCCTCGTATTATTACGCAAGTCAT
CACCATGACAACCGTGTTCCTCCCCCCAGCCCCTTGGTGATACGTCAGCAACCCGGGCAT
TCCCAAACAAAGAGGTTGAAATCATCCGGAAGTTCCATGTCAGCAGAGGAGGTTAATGGG
ATCGAGAGCGGAGGAGAGAACGATGCGGAGACGTTTTATAATCGTCCTCCGAGCTCACAC
CACTCCTGGCATGGAAGCCCTTTGCAGTCTCCAACTATTAAAACAACTCGAGCCCAGCCT
GATTTAAATGGTGGCCATTCCTCTGTTACGTCACCGGGATCCGGTGGGAATGAAATGTTA
CCGCCAAGTACGCCTGGCTCAACCAGTGGACCAGTATCTGCATTTCCGCGCTTGCAAGGT
TCTCATTCATCACCATGGCACCCAGTACTTCAGCAAAGCCACCATTTTCCTTATGGGGCT
ACGCAGTCTTTTTATCACCCGCGGCAAGATTTAAAAGATTTTGCTCAGTTCGCTTGTCTA
TCTGCGGAAGCCGCCAAGCATACACCAAGTCAGATTCTCAGTTATCATCCGCATTCTGTA
TCTCACATGGCGCTTGGTCAGTCCGGTCTCTCTGGCGCCACCACACGACCAAGTATTCAT
CAACAGCAAACCTCTCCGCACGATGCCGCTGCAGAGCGATGGTCACACGGTCAAGTGGAA
AACCAATCTGCCGACTACCATCCTATGCTTTCAAATGAAAGGCTTCAAAGTGTCGTGCCC
GGGTTAAACCCTGACGAGGCATTGGTGGCAGAAGATCGTTTATTTCCGCCGATCCCAGGC
GCTATGATGGATCAGTCACGTAACAGTGCCGGTGGCGTTTCTTCGCAATCATCTAATCAG
AGCGCTCCCTTGTCCAACAAAGAATGAAGCCATTGTTACAACCTGCCTTTCGCTATATGA
TCTCAACCTCGCTGTATGAGCAGTATGGATTAACTACAATGCGTACGGTAGAGAGGACAT
TCATATATACTCGGAAGTTTATTTTATTACCTCGAAAAAACAAGTACAGCTTATACGTCA
TGTTGTTGTGACGTAACAAAAAGCATTGTCGAATATGATGTTACCTCATACAATACCTGG
CCTCAAGAAGCTACTATTTCATCCAATCAAGTTCCTCCTACAAGTTCACGTGATCAGACC
TCGTCTGGTGCTCCAAAAGTTCCAAGGTGTGTCTGATGACGTCACGGTGACGTCACGTTG
TCGTTACATCGTGTCAATCAAACTTATATTAACGAAATGTAGTAAAAGACATTCGTCGAA
AGTGTATATAAGCAAGTATAGCTATCACAGATTCGAGATTTTAGTCAATTTGAATTGATG
ACGTCATATTTGATGACGTAATCGTTAAATGACGTCACTTACATTGATAGAGTTTAGCTC
TCTAAATGTCAGCATCCTGTTGTTACTGAGTATATTATTTATTAGCATGATTCATATATA
AAAAGACATATCTCACACAAAACACTCATGATACAAACTTTTCACACTTTTGTTTATATA
GGGATCACACTGCCTTTTCGCCCTTTTGAGCAATCTGTAGTTCATTTTAAAAATTAATTC
TTTAGAATCAATTGTTATATAGTATGATCGGGGAAGATGGGACACCTTTTCACTCCATTT
TCTCGTCTGATTTGGTATAAACTAAAGGAACTCTGAAGTAATATAAAACTGTATCCTTAC
GACTCCCATAGACCGTTGGTAAATGTTTAAAACACGATCAGGAAGTTTGGATATTATGTG
CTAAAGTTCTCCCATGTTCCCCACAGTACTCTACATATGAAGTGGTATCGTTAAAAAGTT
CCTATATAAACAATTAAGTGGACTTGAAAAAGTTCATCGTTGAATTTGTCCGATATTTTA
TCAGTTCAGTATTTTTGTCGTTGTTTCTATTTGTTCAATCTGCAATAAATGAATCAG
| ProSiteProfiles |
CTF/NFI_DNA-bd-dom (IPR020604) - T[7-201] 56.479 |
| Pfam |
CTF/NFI_DNA-bd_N (IPR019548) - T[13-52] 2.0E-26 |
| PANTHER |
CTF/NFI (IPR000647) - T[13-452] 1.3E-147 |
| ProSitePatterns |
CTF/NFI_DNA-bd_CS (IPR019739) - T[42-53] . |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[73-182] 1.6E-14 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[75-177] 6.7E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFIX_HUMAN | 49.537 % | 355 | 5.13E-117 |
| NFIB_HUMAN | 66.935 % | 340 | 1.43E-112 |
| NFIA_HUMAN | 49.543 % | 355 | 8.22E-117 |