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- Transcript 'KH2012:KH.C5.659.v1....'
Transcript Model
Transcript Id
KH2012:KH.C5.659.v1.A.nonSL4-1
Possible name(s)
AMY1A; AMY1B; AMY2B
Gene model
Location
KhC5 [742,377 / 747,654]
Amino acid sequence
Length: 613
>KH.C5.659.v1.A.nonSL4-1
VTMKTVLLIFSLVAAASAQWDPNFVSGRAGIVHLFEWHWDTIADECETFLAPNLYAGVQV
SPPNENRIVGGRPWWERYQPVSYKIGTRSGDRAAFENMVDRCNSVGVRIYVDAVVNHMCG
GDGGSSTQGTAGSTCYPDSEGFPAVPYSSLDFNDGNCNTASGDIENYGDAAQVRNCKLVG
LLDLNQGTDYVRGRIIEFMNDMLSLGVAGFRVDACKHMWPGDLEVIFGSLNDLSTAKGFS
GGSRPYIYQEVIDQGGEPITADQYFSCGAVTEFKYGVNLGNNKNSIQYLENFGESWGMMP
GGNALVFLNNHDNQRGHGGGGNIITFEDPFNLKIFTAYMMAWPYGVPRVMSSYYFSNSDE
GPPSNQRSINADGSCGNGWVCEHRWRQIKNMMGFAVAAQGQGVSNWWSNGQQIAFSRGDR
AFLAINHDGYTLSENLQTGMPAGDYCNVNSGEYSNNQCTGECISVGSDGYAYINIGATED
PVVAIHVNAPCNCEGGNCGGNTGGGGGTTNPPITGECTSCSNCNSKVDCGYLGIDQTQCE
GSGCLWCPSSGNDPWCIVSTGSSGGTGGSSCSISDLSKQDCGYVGIDEGSCEGKGCCWVE
SSTNGIPWCFYPQ
Nucleotide sequence
Length: 1,885
>KH2012:KH.C5.659.v1.A.nonSL4-1
TTGAGTGAGTGACCATGAAAACGGTGTTGCTTATCTTTTCGTTGGTTGCCGCTGCTTCAG
CGCAGTGGGATCCAAACTTTGTTTCAGGAAGAGCTGGAATCGTCCATCTATTTGAATGGC
ACTGGGACACCATTGCTGATGAATGCGAAACTTTTCTTGCTCCCAACTTATACGCAGGTG
TTCAGGTTTCTCCCCCAAATGAGAACCGCATTGTTGGTGGAAGACCTTGGTGGGAAAGAT
ATCAACCCGTCTCTTACAAGATCGGAACCAGATCCGGAGACAGGGCGGCATTCGAAAACA
TGGTGGATAGATGCAACAGCGTTGGTGTAAGAATATACGTGGATGCGGTGGTGAACCATA
TGTGTGGCGGGGATGGTGGATCAAGCACCCAAGGAACTGCTGGCAGCACCTGCTACCCTG
ACTCAGAAGGTTTTCCGGCCGTCCCGTATTCTAGTTTAGATTTCAACGATGGTAACTGCA
ATACAGCGTCCGGGGACATTGAGAACTACGGCGATGCCGCTCAGGTGAGGAACTGTAAAC
TGGTAGGCCTGCTTGATCTCAACCAAGGGACGGATTACGTCAGAGGTAGAATAATTGAAT
TCATGAACGACATGCTCAGCCTCGGTGTCGCTGGTTTTCGTGTTGATGCATGCAAGCACA
TGTGGCCTGGAGATCTGGAAGTAATTTTTGGATCCCTCAACGACCTTTCAACGGCCAAGG
GATTTAGTGGAGGAAGTCGACCCTACATTTATCAAGAAGTTATTGACCAAGGAGGTGAGC
CTATTACGGCCGACCAGTATTTCAGCTGTGGGGCCGTAACAGAATTCAAATATGGAGTCA
ATCTTGGCAATAACAAAAACTCAATTCAGTATTTAGAGAATTTCGGAGAATCTTGGGGAA
TGATGCCTGGTGGAAACGCTTTGGTTTTCTTGAACAACCACGACAACCAACGTGGACATG
GTGGTGGGGGGAACATCATCACGTTTGAAGACCCGTTTAATTTGAAAATATTCACGGCTT
ACATGATGGCTTGGCCTTACGGAGTCCCTCGAGTAATGTCAAGTTATTATTTCAGCAATT
CTGATGAAGGTCCACCATCAAACCAGCGAAGCATCAACGCGGATGGTTCTTGTGGAAACG
GTTGGGTTTGCGAACATCGTTGGCGTCAGATTAAAAACATGATGGGCTTCGCTGTTGCGG
CGCAAGGCCAGGGTGTTTCAAACTGGTGGTCAAATGGTCAACAAATTGCATTTTCTCGTG
GAGATCGAGCTTTTTTGGCAATTAATCATGACGGTTATACATTGAGTGAAAACCTGCAAA
CTGGGATGCCTGCTGGTGATTACTGCAACGTTAACTCTGGTGAATATTCCAACAACCAAT
GTACTGGCGAATGTATTTCTGTTGGATCCGACGGGTACGCGTATATTAACATCGGTGCAA
CTGAAGACCCAGTTGTTGCCATTCACGTCAATGCTCCTTGCAACTGTGAAGGTGGAAACT
GTGGTGGAAACACCGGGGGTGGGGGTGGAACAACCAACCCTCCAATCACGGGTGAATGCA
CGAGTTGTAGCAATTGCAATAGCAAAGTAGATTGTGGATACCTCGGTATCGATCAAACAC
AATGTGAAGGCAGTGGCTGCCTGTGGTGTCCATCATCTGGTAACGATCCATGGTGTATTG
TCTCAACTGGTTCTTCTGGTGGAACGGGCGGATCATCGTGCAGCATCTCGGATTTATCCA
AACAAGATTGTGGATATGTAGGAATTGACGAGGGTAGCTGTGAAGGCAAAGGCTGTTGTT
GGGTTGAATCGTCAACAAATGGGATACCGTGGTGTTTCTACCCGCAGTAATTGATTCAAT
AAATATCAACATTACTAAAACTAAA
| SUPERFAMILY |
Glycoside_hydrolase_SF (IPR017853) - T[22-394] 3.62E-91 |
| SMART |
Glyco_hydro_13_cat_dom (IPR006047) - T[29-395] 4.1E-79 |
| PRINTS |
Alpha_amylase (IPR006046) - T[74-91] 5.4E-31 - T[106-117] 5.4E-31 - T[207-218] 5.4E-31 - T[246-264] 5.4E-31 - T[302-314] 5.4E-31 |
| Pfam |
Glyco_hydro_13_cat_dom (IPR006047) - T[83-318] 3.7E-10 |
| Gene3D |
Glyco_hydro_b (IPR013780) - T[401-495] 8.1E-31 |
| SMART |
A-amylase_C (IPR031319) - T[404-490] 5.0E-42 |
| Pfam |
A-amylase/branching_C (IPR006048) - T[407-487] 2.4E-11 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[518-560] 11.839 - T[569-613] 17.085 |
| SMART |
P_trefoil_dom (IPR000519) - T[518-563] 0.096 - T[569-613] 1.3E-4 |
| Pfam |
P_trefoil_dom (IPR000519) - T[522-556] 3.4E-5 - T[571-612] 4.3E-11 |
| CDD |
P_trefoil_dom (IPR000519) - T[524-556] 6.53284E-6 - T[571-612] 4.13507E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AMYP_HUMAN | 54.403 % | 535 | 0 |
| AMY1_HUMAN | 54.599 % | 536 | 0 |
| AMY2B_HUMAN | 54.795 % | 538 | 0 |