- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L4.55.v1.A...' >
- Transcript 'KH2012:KH.L154.21.v1...' >
- Transcript 'KH2012:KH.C9.38.v11....' >
- Transcript 'KH2012:KH.C5.76.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C5.76.v1.A.SL2-1
Possible name(s)
BTRC; FBXW11; FBXW7
Gene model
Location
KhC5 [2,913,269 / 2,927,252]
Amino acid sequence
Length: 627
>KH.C5.76.v1.A.SL2-1
SVAKLVVTNRRQATHTIMDSDPDDCIFEGDENEEVIGQQRMDSPQHMEIANGSNNDDSSN
DEVMDDNLPAAMMMQGVPVSIGIDNHPTASSNVSNSNPMQHQSVTLSILPASHNIQSLQD
RIDVRNTNLDSGPILTNDTNYNPAQTVLSPRLRKLSQQLSLSENYKNERDSCTKHFDTWS
EQEQVDFVEHLILRMCHYQHGQINCFLKPMLQRDFISALPARGLSHVAENILTYLDAKSL
GAAELVCREWYRVVQDGHLWKRLIERMVSTHSLWKGLSERMGWGQHLFKGKPENSVPDSF
FRSLYPSIISDIEKIESNWRCGRHDLKRIMCRSDNSKGVYCLQYDDDKIVSGLRDNTIKL
WDRRTLENTKVLTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNSGDLVNTLVHHCEAVL
HLRFDNGLMVTCSKDRSIAVWDMVSAKEINMRRVLVGHRAAVNVVDFDDKYIVSASGDRT
IKVWNTLTCEFVRTLNGHRRGIACLQYRDRLVVSGSSDNTIRLWDIEFGACLRILEGHEE
LVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRSPSSTLCLRTLVEHTGRVFRLQFDEFQ
IVSSSHDDSILIWDFLDVPQAPTEATK
Nucleotide sequence
Length: 2,585
>KH2012:KH.C5.76.v1.A.SL2-1
TTGCCCTAACAGCTTGTAGGTGTGGTGTTTTAATTTACTTATTTTGCTGCATGATCTGTT
GCAAAGCTGGTGGTAACGAACCGTAGACAAGCTACACATACCATTATGGACAGTGACCCT
GATGATTGCATATTTGAGGGTGATGAAAATGAAGAAGTTATTGGCCAACAAAGAATGGAC
TCCCCACAACACATGGAAATTGCCAACGGTTCAAACAACGACGATTCATCTAATGATGAA
GTAATGGATGATAATCTTCCTGCTGCCATGATGATGCAGGGTGTACCTGTCTCTATCGGC
ATTGACAACCACCCTACTGCATCAAGCAATGTTTCCAACTCCAATCCCATGCAGCACCAA
TCTGTCACGCTCTCCATCCTCCCCGCCTCCCACAACATCCAGTCCTTACAGGATCGGATC
GACGTGAGGAACACGAACCTCGACTCCGGGCCCATTTTAACAAACGACACGAACTACAAC
CCAGCACAGACCGTGCTGTCACCCAGACTCCGAAAATTAAGCCAGCAGCTGAGTTTGAGC
GAGAATTATAAAAACGAGCGTGACTCTTGCACAAAGCACTTCGACACGTGGTCAGAACAG
GAGCAGGTCGACTTTGTGGAGCATCTTATCCTTAGAATGTGCCATTACCAGCATGGACAG
ATAAACTGCTTTCTTAAACCAATGTTGCAACGGGATTTTATATCAGCACTGCCAGCACGA
GGCCTTTCACATGTAGCAGAAAACATACTTACATACCTTGACGCAAAGTCACTCGGTGCG
GCTGAACTTGTGTGTAGGGAATGGTACAGAGTTGTACAAGATGGTCACTTGTGGAAACGT
CTTATTGAACGAATGGTCAGCACACATTCTCTGTGGAAGGGCTTGTCAGAAAGAATGGGC
TGGGGCCAACATTTGTTCAAAGGAAAGCCGGAAAATTCCGTTCCAGATTCATTCTTCCGC
AGCCTATACCCTTCCATAATATCTGACATTGAGAAAATTGAGTCTAACTGGCGATGTGGC
AGACATGACTTGAAACGAATAATGTGCCGAAGTGACAACAGTAAAGGTGTATATTGCTTA
CAATATGATGATGATAAAATTGTCTCCGGTCTCCGTGACAACACGATTAAGTTATGGGAT
CGACGCACTCTTGAAAATACAAAGGTCCTAACTGGCCACACGGGGTCAGTATTGTGCTTA
CAATACGACGAGCGTGTCATAATCACTGGTTCATCAGATTCGACAGTGAGGGTGTGGGAT
GTAAATAGCGGTGACCTGGTCAACACACTTGTACATCATTGTGAGGCAGTTCTGCATTTA
AGATTCGACAATGGCCTCATGGTCACTTGCTCTAAGGACCGTTCGATTGCTGTATGGGAC
ATGGTATCAGCTAAAGAGATAAACATGAGGAGAGTATTGGTTGGTCACAGAGCTGCTGTT
AATGTGGTTGATTTTGACGACAAATATATCGTTTCTGCATCTGGGGATAGAACTATTAAG
GTGTGGAACACACTCACTTGTGAGTTTGTGCGAACACTCAATGGACACAGGCGTGGCATA
GCGTGCTTGCAATACCGTGACCGCCTCGTAGTTAGCGGTTCTTCAGATAATACAATACGA
TTATGGGACATAGAGTTCGGTGCGTGTCTTCGAATATTAGAAGGTCATGAAGAGTTAGTT
CGTTGTATTCGATTCGACAACAAACGAATCGTCAGTGGTGCATATGATGGGAAAATCAAA
GTATGGGATTTACAAGCTGCCCTTGACCCCAGGTCACCATCAAGTACATTGTGTTTGAGA
ACTTTAGTTGAGCACACTGGCCGTGTTTTCCGACTTCAATTCGATGAGTTTCAGATTGTG
AGCAGTTCTCACGACGACTCTATTCTAATCTGGGACTTCTTGGACGTCCCACAAGCTCCC
ACTGAAGCCACCAAGTAATTTCCTACAATTTTCCAAAAATATTTCCCAGACACTGTCTAG
TTATCATACGAAAAAAAGTTGAAAATGCAAAATTTTGAATTTTTTTTTTTCAAAATTTAG
GTCTCCAAACCGGACGTACACTTATGTTCAACGGTGACATAACTTCGGCGCAAAATTGAC
AATCCCCATGTCTGTAGCAACCTCACATTTTCTTTGAAGCTTTTCTTGTTGTAGCTTGAG
CCTAGCTCAACACCCTACAAATGAAATCCTTTGCCCCGAAACATAAAATTAATCCCAATT
TAAATGCATTTAAAACTAAATTGCCGACAAAGCTTTGTAACTCAATTGCTTTCCATTACA
ACTTTTCCTATTCTCTTGGCTTCTTTTTTTCTTTCTTTTCTCCTGCGAATATTAAGATCT
TATAAGAAGTAATATAATTCCCTTAAAGTACAAAGTGAACCTGCAGGGTGCAGCTCAACG
TGCACGAGTTGCACGGTGGACACGAAAGCTTGTGTAACTGCAAGGCCCACAGCACCCACA
CGCCCCCTGCTGTTAAATCAAACGCTTTCAAATGGTTTGTTACTTGTTCGATTTTAGGTC
GCCCACCAAACGTTTGCTATGAATACTGTACAACGTTAATAAATTTACCGGCTTTTGCCA
GTTTA
| SMART |
Beta-TrCP_D (IPR021977) - T[173-212] 1.4E-26 |
| Pfam |
Beta-TrCP_D (IPR021977) - T[174-212] 1.3E-23 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[208-320] 1.44E-24 |
| SMART |
F-box_dom (IPR001810) - T[224-263] 9.8E-5 |
| ProSiteProfiles |
F-box_dom (IPR001810) - T[225-263] 9.339 |
| Pfam |
F-box_dom (IPR001810) - T[228-263] 1.2E-8 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[319-613] 8.7E-106 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[323-614] 3.2E-73 |
| SMART |
WD40_repeat (IPR001680) - T[325-362] 0.0073 - T[365-402] 2.0E-7 - T[405-442] 1.8E-4 - T[448-485] 3.7E-6 - T[488-525] 8.8E-7 - T[528-565] 2.1E-6 - T[577-614] 3.8E-4 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[332-623] 60.112 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[332-371] 9.907 - T[372-411] 15.922 - T[412-451] 10.074 - T[455-494] 12.848 - T[495-534] 13.717 - T[535-574] 13.148 - T[584-614] 9.573 |
| Pfam |
WD40_repeat (IPR001680) - T[337-362] 0.041 - T[367-402] 8.6E-6 - T[453-485] 7.7E-4 - T[491-525] 8.2E-5 - T[529-565] 6.3E-6 - T[580-614] 0.1 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[389-403] . - T[429-443] . - T[472-486] . - T[512-526] . - T[552-566] . - T[601-615] . |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[389-403] 5.8E-10 - T[512-526] 5.8E-10 - T[552-566] 5.8E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXW7_HUMAN | 31.685 % | 227 | 2.37E-65 |
| FBW1A_HUMAN | 75.147 % | 816 | 0 |
| FBW1B_HUMAN | 80.603 % | 807 | 0 |