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  1. Transcript 'Phfumi.CG.MTP2014.S2...' > 
  2. Transcript 'NCBI:KH.XM_018816858...' > 
  3. Transcript 'KH2012:KH.L151.2.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'KH2012:KH.C5.76.v2.A...'

Transcript Model

Transcript Id

KH2012:KH.C5.76.v2.A.SL2-1

Possible name(s)

BTRC; FBXW11; FBXW7

Gene model

KH2012:KH.C5.76

Location

KhC5 [2,913,269 / 2,927,252]

Sequences

Amino acid sequence

Length: 638

>KH.C5.76.v2.A.SL2-1
SVAKLVVTNRRQATHTIMDSDPDDCIFEGDENEEVIGQQRMDSPQHMEIANGSNNDDSSN
DEVMDDNLPAAMMMQGVPVSIGIDNHPTASSNVSNSNPMQHQSVTLSILPASHNIQSLQD
RIDVRNTNLDSGPILTNDTNYNPAQTVLSPRLRKLSQQLSLSENYKNERDSCTKHFDTWS
EQEQVDFVEHLILRMCHYQHGQINCFLKPMLQRDFISALPARGLSHVAENILTYLDAKSL
GAAELVCREWYRVVQDGHLWKRLIERMVSTHSLWKGLSERMGWGQHLFKGKPENSVPDSF
FRSLYPSIISDIEKIESNWRCGRHDLKRIMCRSDNSKGVYCLQYDDDKIVSGLRDNTIKL
WDRRTLENTKVLTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNSGDLVNTLVHHCEAVL
HLRFDNGLMVTCSKDRSIAVWDMVSAKEINMRRVLVGHRAAVNVVDFDDKYIVSASGDRT
IKVWNTLTCEFVRTLNGHRRGIACLQYRDRLVVSGSSDNTIRLWDIEFGACLRILEGHEE
LVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRSPSSTLCLRTLVEHTGRVFRLQFDEFQ
IVSSSHDDSILIWDFLDVPQAPTEATKSPNRTYTYVQR

Nucleotide sequence

Length: 2,479

>KH2012:KH.C5.76.v2.A.SL2-1
TTGCCCTAACAGCTTGTAGGTGTGGTGTTTTAATTTACTTATTTTGCTGCATGATCTGTT
GCAAAGCTGGTGGTAACGAACCGTAGACAAGCTACACATACCATTATGGACAGTGACCCT
GATGATTGCATATTTGAGGGTGATGAAAATGAAGAAGTTATTGGCCAACAAAGAATGGAC
TCCCCACAACACATGGAAATTGCCAACGGTTCAAACAACGACGATTCATCTAATGATGAA
GTAATGGATGATAATCTTCCTGCTGCCATGATGATGCAGGGTGTACCTGTCTCTATCGGC
ATTGACAACCACCCTACTGCATCAAGCAATGTTTCCAACTCCAATCCCATGCAGCACCAA
TCTGTCACGCTCTCCATCCTCCCCGCCTCCCACAACATCCAGTCCTTACAGGATCGGATC
GACGTGAGGAACACGAACCTCGACTCCGGGCCCATTTTAACAAACGACACGAACTACAAC
CCAGCACAGACCGTGCTGTCACCCAGACTCCGAAAATTAAGCCAGCAGCTGAGTTTGAGC
GAGAATTATAAAAACGAGCGTGACTCTTGCACAAAGCACTTCGACACGTGGTCAGAACAG
GAGCAGGTCGACTTTGTGGAGCATCTTATCCTTAGAATGTGCCATTACCAGCATGGACAG
ATAAACTGCTTTCTTAAACCAATGTTGCAACGGGATTTTATATCAGCACTGCCAGCACGA
GGCCTTTCACATGTAGCAGAAAACATACTTACATACCTTGACGCAAAGTCACTCGGTGCG
GCTGAACTTGTGTGTAGGGAATGGTACAGAGTTGTACAAGATGGTCACTTGTGGAAACGT
CTTATTGAACGAATGGTCAGCACACATTCTCTGTGGAAGGGCTTGTCAGAAAGAATGGGC
TGGGGCCAACATTTGTTCAAAGGAAAGCCGGAAAATTCCGTTCCAGATTCATTCTTCCGC
AGCCTATACCCTTCCATAATATCTGACATTGAGAAAATTGAGTCTAACTGGCGATGTGGC
AGACATGACTTGAAACGAATAATGTGCCGAAGTGACAACAGTAAAGGTGTATATTGCTTA
CAATATGATGATGATAAAATTGTCTCCGGTCTCCGTGACAACACGATTAAGTTATGGGAT
CGACGCACTCTTGAAAATACAAAGGTCCTAACTGGCCACACGGGGTCAGTATTGTGCTTA
CAATACGACGAGCGTGTCATAATCACTGGTTCATCAGATTCGACAGTGAGGGTGTGGGAT
GTAAATAGCGGTGACCTGGTCAACACACTTGTACATCATTGTGAGGCAGTTCTGCATTTA
AGATTCGACAATGGCCTCATGGTCACTTGCTCTAAGGACCGTTCGATTGCTGTATGGGAC
ATGGTATCAGCTAAAGAGATAAACATGAGGAGAGTATTGGTTGGTCACAGAGCTGCTGTT
AATGTGGTTGATTTTGACGACAAATATATCGTTTCTGCATCTGGGGATAGAACTATTAAG
GTGTGGAACACACTCACTTGTGAGTTTGTGCGAACACTCAATGGACACAGGCGTGGCATA
GCGTGCTTGCAATACCGTGACCGCCTCGTAGTTAGCGGTTCTTCAGATAATACAATACGA
TTATGGGACATAGAGTTCGGTGCGTGTCTTCGAATATTAGAAGGTCATGAAGAGTTAGTT
CGTTGTATTCGATTCGACAACAAACGAATCGTCAGTGGTGCATATGATGGGAAAATCAAA
GTATGGGATTTACAAGCTGCCCTTGACCCCAGGTCACCATCAAGTACATTGTGTTTGAGA
ACTTTAGTTGAGCACACTGGCCGTGTTTTCCGACTTCAATTCGATGAGTTTCAGATTGTG
AGCAGTTCTCACGACGACTCTATTCTAATCTGGGACTTCTTGGACGTCCCACAAGCTCCC
ACTGAAGCCACCAAGTCTCCAAACCGGACGTACACTTATGTTCAACGGTGACATAACTTC
GGCGCAAAATTGACAATCCCCATGTCTGTAGCAACCTCACATTTTCTTTGAAGCTTTTCT
TGTTGTAGCTTGAGCCTAGCTCAACACCCTACAAATGAAATCCTTTGCCCCGAAACATAA
AATTAATCCCAATTTAAATGCATTTAAAACTAAATTGCCGACAAAGCTTTGTAACTCAAT
TGCTTTCCATTACAACTTTTCCTATTCTCTTGGCTTCTTTTTTTCTTTCTTTTCTCCTGC
GAATATTAAGATCTTATAAGAAGTAATATAATTCCCTTAAAGTACAAAGTGAACCTGCAG
GGTGCAGCTCAACGTGCACGAGTTGCACGGTGGACACGAAAGCTTGTGTAACTGCAAGGC
CCACAGCACCCACACGCCCCCTGCTGTTAAATCAAACGCTTTCAAATGGTTTGTTACTTG
TTCGATTTTAGGTCGCCCACCAAACGTTTGCTATGAATACTGTACAACGTTAATAAATTT
ACCGGCTTTTGCCAGTTTA

InterProScan

SMART
Beta-TrCP_D (IPR021977) - T[173-212] 1.4E-26
Pfam
Beta-TrCP_D (IPR021977) - T[174-212] 1.3E-23
SUPERFAMILY
F-box-like_dom_sf (IPR036047) - T[208-320] 1.44E-24
SMART
F-box_dom (IPR001810) - T[224-263] 9.8E-5
ProSiteProfiles
F-box_dom (IPR001810) - T[225-263] 9.339
Pfam
F-box_dom (IPR001810) - T[228-263] 1.2E-8
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[319-613] 9.1E-106
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[323-614] 2.71E-73
SMART
WD40_repeat (IPR001680) - T[325-362] 0.0073 - T[365-402] 2.0E-7 - T[405-442] 1.8E-4 - T[448-485] 3.7E-6 - T[488-525] 8.8E-7 - T[528-565] 2.1E-6 - T[577-614] 3.8E-4
ProSiteProfiles
WD40_repeat (IPR001680) - T[332-371] 9.907 - T[372-411] 15.922 - T[412-451] 10.074 - T[455-494] 12.848 - T[495-534] 13.717 - T[535-574] 13.148 - T[584-614] 9.573
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[332-623] 60.112
Pfam
WD40_repeat (IPR001680) - T[337-362] 0.042 - T[367-402] 8.8E-6 - T[453-485] 7.9E-4 - T[491-525] 8.4E-5 - T[529-565] 6.4E-6 - T[580-614] 0.1
ProSitePatterns
WD40_repeat_CS (IPR019775) - T[389-403] . - T[429-443] . - T[472-486] . - T[512-526] . - T[552-566] . - T[601-615] .
PRINTS
G-protein_beta_WD-40_rep (IPR020472) - T[389-403] 6.1E-10 - T[512-526] 6.1E-10 - T[552-566] 6.1E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FBXW7_HUMAN 31.685 % 228 2.0E-65
FBW1A_HUMAN 75.096 % 835 0
FBW1B_HUMAN 80.421 % 826 0





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