Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C6.108.v1.A.ND1-3

Possible name(s)

CDK3; CDK4; CDK6

Gene model

KH2012:KH.C6.108

Location

KhC6 [324,522 / 327,742]

Sequences

Amino acid sequence

Length: 151

>KH.C6.108.v1.A.ND1-3
VMTSEQSHDADEAPSARASQSSLHAEPTSSPWTNQRYHTLSEIGVGAYGVVFKAQDMQSD
DENKFVAIKCVRVENSEQGMPLSTVREIALLRQLESCEHPNVVRLLDICAGHHSKRETQL
MLVFEYVDQDLDVFLKKCPDSGLEPEKVTVS

Nucleotide sequence

Length: 800

>KH2012:KH.C6.108.v1.A.ND1-3
ACCCACGCGCTTATCTCTCACTTGGAATGTTAGGTGTCCCAGGAATTCTCTATTACTGCG
TAGGTGGTTCGGCAGTCATGTTACTGGCATTTGAGGTTAAACTGTCAAAGCCTTGAAAGT
CCATATATCGTGAAATTTCAAGGAAACATATTGATTCACACGTCAATTACAAAGTTTCCA
AAGCCAAGCTCTGAAAGACAGCGACAAGTTGTGGCGCTAGGTGATGACAAGTGAACAGAG
TCATGATGCAGATGAAGCACCAAGTGCTCGTGCCAGTCAGTCATCCTTACATGCCGAACC
TACCAGCAGTCCATGGACAAACCAGCGTTACCATACACTATCTGAGATTGGTGTTGGTGC
TTATGGTGTTGTGTTTAAGGCACAAGACATGCAGAGTGATGATGAGAATAAGTTTGTGGC
AATAAAATGTGTTCGAGTGGAAAATTCTGAGCAAGGTATGCCTTTGAGTACGGTCCGTGA
AATAGCTTTACTGAGGCAGCTTGAGTCTTGTGAACACCCTAATGTTGTCAGATTACTTGA
CATTTGTGCTGGCCACCATTCAAAACGTGAAACACAACTCATGCTTGTGTTTGAATATGT
TGACCAGGATCTTGACGTGTTTTTAAAAAAATGCCCCGACTCTGGATTAGAACCGGAAAA
AGTCACAGTAAGTTGAACTTAAGTTTTAATTGACTTTGAATTATCCGCGAGATTAATTGA
CAATTTAATTTGCATGTAAGTCTGTGTTAAGCAACACAATGGTTCTAAATTTGAACTGTT
CAGGATATTATGCGGCAAAT

InterProScan

SUPERFAMILY	Kinase-like_dom_sf (IPR011009) - T[33-144] 5.55E-23
ProSiteProfiles	Prot_kinase_dom (IPR000719) - T[37-151] 15.482
Pfam	Prot_kinase_dom (IPR000719) - T[37-136] 1.2E-14
ProSitePatterns	Protein_kinase_ATP_BS (IPR017441) - T[43-69] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CDK6_HUMAN	54.783 %	135	1.88E-39
CDK5_HUMAN	42.105 %	82.4	1.39E-19
CDK4_HUMAN	55.172 %	125	8.11E-36