- Transcript 'KH2012:KH.L37.33.v1....' >
- Transcript 'KH2012:KH.L37.33.v1....' >
- Transcript 'KH2012:KH.C11.423.v1...' >
- Transcript 'KH2012:KH.C6.112.v1....' >
- Transcript 'KH2012:KH.C6.112.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.112.v1.A.SL1-1
Possible name(s)
LONRF1; LONRF2; LONRF3
Gene model
Location
KhC6 [1,023,649 / 1,031,116]
Amino acid sequence
Length: 781
>KH.C6.112.v1.A.SL1-1
YKLYCYLVDKFIRMSSELTCHSNNVESTTVKNFGTNSLVKSFPGSSSQENLYRSGANASA
YSEFGVTLHHIAVTLSAQSDCLSPVTVDILIDIIMDKLQSILSENRDTVFNSTTLNVEDF
ESPMDDFACPHCRELLYKPITFLCGHSFCQLCVQCQENPMTFCEVCNVLITDEERLGYSN
NVVLMAVFESWHKNEWQGRALTTEGIALLCKQEYKKAIEKFNKALELVPQSHSAFLHRAK
ANFSLGNYEAALRDATRASVVAHKSPEAYYVKGEILYQLDYVEEALFYFLICVLLDSSRK
DAKKRTHEIITTLVSPHFSATNATHSTNKRSNPSQNEFPSKRNCLENSRNLPYFPVYDET
ASSSSATVDYVTNNDITPTVHVTPMTFTNRSVYPPSVHAWSMKNLDVKPSLTKSDTPEKY
EAALEIILKTIDDSSANDLRTLRTQRVSKDLVEAMALKPAPKARLQNNEELDDSDLECSL
CMRLLCDPVCTPCGHMFCQGCIERCLDHKSQCPLCKKTAKHNKSLEALHSPCCYVTKAII
RQYLPEEYAERELQHKQEIDELTKTQPIFVSTIAYPSVPCPLHIFEPRYMLMLRRCLDYN
DREFGMCMRSPDKPHHDNGTTLRVKNVKFFPDGRSVVDSVGNRRFVTKHSQKRDGYHVAT
LKFIEDTKIRDEDIEKLTRIVDKVYDEAREWFSSVTPPLKQKITLHFGDLPTKQYGFNTE
NGPDWLWWVLAVLPVEDTYKASIVGKNNLQERLLTIHKIFVCLQVKSKKNSQGSASTSSS
S
Nucleotide sequence
Length: 2,769
>KH2012:KH.C6.112.v1.A.SL1-1
TTATAAGTTATATTGTTATCTAGTGGACAAGTTCATAAGAATGTCGTCTGAATTGACCTG
TCACTCAAATAACGTTGAATCAACGACAGTTAAAAATTTTGGAACTAATTCTTTGGTGAA
ATCATTTCCTGGTTCCAGCTCACAAGAAAACCTTTATCGTTCTGGTGCTAATGCGTCAGC
TTATTCCGAATTTGGAGTGACATTACATCATATTGCTGTGACACTTTCCGCACAATCAGA
TTGTCTAAGTCCCGTTACTGTTGATATTCTCATTGATATTATTATGGACAAACTTCAATC
TATTTTATCTGAAAACAGAGACACAGTATTCAATTCTACAACTCTTAATGTAGAAGACTT
CGAATCCCCAATGGATGATTTTGCTTGCCCTCACTGCCGCGAACTTTTGTACAAACCTAT
TACATTTCTATGTGGCCACTCATTTTGCCAGCTCTGTGTACAGTGTCAAGAAAACCCAAT
GACTTTTTGTGAAGTTTGCAATGTTCTGATAACAGATGAAGAAAGATTAGGATACAGCAA
TAATGTTGTTCTGATGGCTGTTTTTGAGTCATGGCACAAAAACGAATGGCAAGGCAGAGC
TTTAACAACAGAAGGAATTGCCCTGTTGTGTAAACAGGAATACAAAAAAGCCATTGAAAA
ATTTAATAAAGCTTTAGAACTTGTCCCACAAAGCCATTCTGCTTTCCTACACCGCGCAAA
AGCAAATTTCTCGCTTGGTAATTATGAAGCTGCTTTACGAGATGCTACGCGCGCTTCTGT
TGTAGCTCACAAATCTCCCGAGGCTTATTATGTAAAAGGAGAAATCCTCTACCAGCTTGA
CTACGTGGAAGAAGCATTGTTTTACTTTCTTATTTGTGTGCTTCTCGACTCCAGCCGAAA
AGACGCGAAAAAACGAACGCACGAGATTATTACCACTCTTGTCTCACCGCATTTCTCCGC
CACAAATGCAACACATTCTACCAACAAGCGTTCAAATCCAAGCCAAAACGAGTTTCCAAG
CAAAAGGAATTGCTTAGAAAACTCACGCAATCTTCCATATTTCCCAGTTTATGATGAAAC
TGCTTCGTCATCTTCCGCTACAGTTGATTACGTCACGAATAATGACATCACACCTACCGT
CCACGTCACACCTATGACGTTTACCAACCGCAGTGTATACCCTCCTTCTGTCCATGCTTG
GTCGATGAAAAATTTGGATGTAAAACCTAGTTTAACCAAAAGTGATACACCCGAAAAATA
TGAAGCAGCTTTGGAAATTATTTTGAAAACGATCGACGATTCTTCAGCGAACGATCTAAG
GACGTTACGTACCCAACGCGTCAGCAAAGACCTTGTCGAAGCTATGGCTCTAAAACCTGC
GCCCAAAGCGAGGTTACAAAACAACGAAGAATTAGATGATAGCGACTTGGAATGTAGCTT
GTGTATGCGACTTCTATGTGACCCTGTATGTACACCCTGCGGACATATGTTCTGCCAAGG
ATGCATCGAAAGATGTCTTGACCATAAATCTCAATGTCCATTGTGTAAGAAGACAGCTAA
ACACAACAAGTCGCTAGAGGCGCTACACTCCCCCTGTTGTTACGTCACAAAAGCTATTAT
ACGTCAATATCTTCCTGAAGAATACGCAGAACGCGAATTACAACACAAACAAGAAATCGA
TGAATTAACAAAAACCCAACCAATTTTCGTATCTACGATTGCATATCCTTCGGTACCCTG
TCCGTTACATATCTTCGAACCACGTTATATGCTGATGTTACGTCGCTGTTTAGACTACAA
TGACCGGGAATTCGGCATGTGCATGAGGTCTCCAGACAAACCGCATCATGACAACGGCAC
AACTTTACGAGTAAAAAACGTCAAATTTTTCCCTGATGGTCGTTCAGTCGTGGACAGCGT
TGGCAACCGACGTTTCGTGACAAAACACAGCCAAAAACGGGACGGCTACCACGTCGCAAC
TCTTAAATTTATTGAAGATACAAAAATCCGGGACGAAGATATAGAAAAACTGACACGAAT
CGTTGATAAGGTATACGACGAGGCAAGAGAATGGTTTTCTTCAGTAACTCCTCCTCTTAA
ACAGAAAATAACGCTTCATTTTGGCGACCTACCCACTAAACAATATGGGTTTAACACCGA
GAACGGGCCCGATTGGCTATGGTGGGTTCTTGCTGTATTACCAGTAGAAGACACATACAA
AGCTTCTATTGTGGGTAAAAACAATCTCCAAGAACGGCTACTCACTATACACAAAATATT
CGTATGCTTACAAGTTAAAAGCAAGAAAAACAGCCAGGGTTCGGCGTCTACTTCGTCGTC
TAGCTAGCTTCGAGGGGATTCGAACCTGTTCCCACCCACTTCAAGCCACTGTCACTGTGC
ACAGCTTACCGCTGCTTACTCGGCACTGCTTAGTAATTAATACATTTAAATAACATTTCA
TTTTTTTGAAATTTGAAGTAAAATAATAATGTATTGATTCTCGCTTCGTAGTACGGTATA
CGCCCGATGCTAATTATTGCTTCGTGAAAAATTGGACCAAAAAAGGCGCTATGGGATAAA
ACACGCACAGTACACCAACTGTTCATATAAAACCCAAACAGTGTACCGTTTTTTATACAG
AAATTTTACAATTAGTGATATTTTTGAATTATTGTACCGCTTTTACAAAAGCACCAATTT
GGAGTTTGATCAGCAATATATACTATTATTGATGTAGCGAAATAAAACCTGTTGTTCACG
CTTAAAAAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[91-191] 9.4E-10 - T[431-550] 7.4E-18 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[129-167] 9.509 - T[478-516] 12.534 |
| SMART |
Znf_RING (IPR001841) - T[129-166] 0.065 - T[478-515] 1.7E-4 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[144-153] . - T[493-502] . |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[192-313] 4.5E-20 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[198-299] 18.12 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[198-231] 10.591 - T[266-299] 6.52 |
| SMART |
TPR_repeat (IPR019734) - T[198-231] 0.0027 - T[232-265] 10.0 - T[266-299] 20.0 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[198-303] 7.05E-21 |
| ProSiteProfiles |
Lon_substr-bd (IPR003111) - T[563-762] 15.612 |
| SMART |
Lon_substr-bd (IPR003111) - T[565-762] 7.2E-5 |
| SUPERFAMILY |
PUA-like_sf (IPR015947) - T[567-758] 1.07E-26 |
| Pfam |
Lon_substr-bd (IPR003111) - T[571-757] 3.5E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LONF2_HUMAN | 33.026 % | 332 | 2.14E-102 |
| LONF3_HUMAN | 45.364 % | 287 | 1.09E-85 |
| LONF1_HUMAN | 31.532 % | 311 | 1.41E-94 |