- Transcript 'KH2012:KH.L37.33.v1....' >
- Transcript 'KH2012:KH.L37.33.v1....' >
- Transcript 'KH2012:KH.L37.33.v1....' >
- Transcript 'KH2012:KH.C11.423.v1...' >
- Transcript 'KH2012:KH.C6.112.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.112.v1.A.SL2-1
Possible name(s)
LONRF1; LONRF2; LONRF3
Gene model
Location
KhC6 [1,023,649 / 1,031,093]
Amino acid sequence
Length: 773
>KH.C6.112.v1.A.SL2-1
DKFIRMSSELTCHSNNVESTTVKNFGTNSLVKSFPGSSSQENLYRSGANASAYSEFGVTL
HHIAVTLSAQSDCLSPVTVDILIDIIMDKLQSILSENRDTVFNSTTLNVEDFESPMDDFA
CPHCRELLYKPITFLCGHSFCQLCVQCQENPMTFCEVCNVLITDEERLGYSNNVVLMAVF
ESWHKNEWQGRALTTEGIALLCKQEYKKAIEKFNKALELVPQSHSAFLHRAKANFSLGNY
EAALRDATRASVVAHKSPEAYYVKGEILYQLDYVEEALFYFLICVLLDSSRKDAKKRTHE
IITTLVSPHFSATNATHSTNKRSNPSQNEFPSKRNCLENSRNLPYFPVYDETASSSSATV
DYVTNNDITPTVHVTPMTFTNRSVYPPSVHAWSMKNLDVKPSLTKSDTPEKYEAALEIIL
KTIDDSSANDLRTLRTQRVSKDLVEAMALKPAPKARLQNNEELDDSDLECSLCMRLLCDP
VCTPCGHMFCQGCIERCLDHKSQCPLCKKTAKHNKSLEALHSPCCYVTKAIIRQYLPEEY
AERELQHKQEIDELTKTQPIFVSTIAYPSVPCPLHIFEPRYMLMLRRCLDYNDREFGMCM
RSPDKPHHDNGTTLRVKNVKFFPDGRSVVDSVGNRRFVTKHSQKRDGYHVATLKFIEDTK
IRDEDIEKLTRIVDKVYDEAREWFSSVTPPLKQKITLHFGDLPTKQYGFNTENGPDWLWW
VLAVLPVEDTYKASIVGKNNLQERLLTIHKIFVCLQVKSKKNSQGSASTSSSS
Nucleotide sequence
Length: 2,746
>KH2012:KH.C6.112.v1.A.SL2-1
TGGACAAGTTCATAAGAATGTCGTCTGAATTGACCTGTCACTCAAATAACGTTGAATCAA
CGACAGTTAAAAATTTTGGAACTAATTCTTTGGTGAAATCATTTCCTGGTTCCAGCTCAC
AAGAAAACCTTTATCGTTCTGGTGCTAATGCGTCAGCTTATTCCGAATTTGGAGTGACAT
TACATCATATTGCTGTGACACTTTCCGCACAATCAGATTGTCTAAGTCCCGTTACTGTTG
ATATTCTCATTGATATTATTATGGACAAACTTCAATCTATTTTATCTGAAAACAGAGACA
CAGTATTCAATTCTACAACTCTTAATGTAGAAGACTTCGAATCCCCAATGGATGATTTTG
CTTGCCCTCACTGCCGCGAACTTTTGTACAAACCTATTACATTTCTATGTGGCCACTCAT
TTTGCCAGCTCTGTGTACAGTGTCAAGAAAACCCAATGACTTTTTGTGAAGTTTGCAATG
TTCTGATAACAGATGAAGAAAGATTAGGATACAGCAATAATGTTGTTCTGATGGCTGTTT
TTGAGTCATGGCACAAAAACGAATGGCAAGGCAGAGCTTTAACAACAGAAGGAATTGCCC
TGTTGTGTAAACAGGAATACAAAAAAGCCATTGAAAAATTTAATAAAGCTTTAGAACTTG
TCCCACAAAGCCATTCTGCTTTCCTACACCGCGCAAAAGCAAATTTCTCGCTTGGTAATT
ATGAAGCTGCTTTACGAGATGCTACGCGCGCTTCTGTTGTAGCTCACAAATCTCCCGAGG
CTTATTATGTAAAAGGAGAAATCCTCTACCAGCTTGACTACGTGGAAGAAGCATTGTTTT
ACTTTCTTATTTGTGTGCTTCTCGACTCCAGCCGAAAAGACGCGAAAAAACGAACGCACG
AGATTATTACCACTCTTGTCTCACCGCATTTCTCCGCCACAAATGCAACACATTCTACCA
ACAAGCGTTCAAATCCAAGCCAAAACGAGTTTCCAAGCAAAAGGAATTGCTTAGAAAACT
CACGCAATCTTCCATATTTCCCAGTTTATGATGAAACTGCTTCGTCATCTTCCGCTACAG
TTGATTACGTCACGAATAATGACATCACACCTACCGTCCACGTCACACCTATGACGTTTA
CCAACCGCAGTGTATACCCTCCTTCTGTCCATGCTTGGTCGATGAAAAATTTGGATGTAA
AACCTAGTTTAACCAAAAGTGATACACCCGAAAAATATGAAGCAGCTTTGGAAATTATTT
TGAAAACGATCGACGATTCTTCAGCGAACGATCTAAGGACGTTACGTACCCAACGCGTCA
GCAAAGACCTTGTCGAAGCTATGGCTCTAAAACCTGCGCCCAAAGCGAGGTTACAAAACA
ACGAAGAATTAGATGATAGCGACTTGGAATGTAGCTTGTGTATGCGACTTCTATGTGACC
CTGTATGTACACCCTGCGGACATATGTTCTGCCAAGGATGCATCGAAAGATGTCTTGACC
ATAAATCTCAATGTCCATTGTGTAAGAAGACAGCTAAACACAACAAGTCGCTAGAGGCGC
TACACTCCCCCTGTTGTTACGTCACAAAAGCTATTATACGTCAATATCTTCCTGAAGAAT
ACGCAGAACGCGAATTACAACACAAACAAGAAATCGATGAATTAACAAAAACCCAACCAA
TTTTCGTATCTACGATTGCATATCCTTCGGTACCCTGTCCGTTACATATCTTCGAACCAC
GTTATATGCTGATGTTACGTCGCTGTTTAGACTACAATGACCGGGAATTCGGCATGTGCA
TGAGGTCTCCAGACAAACCGCATCATGACAACGGCACAACTTTACGAGTAAAAAACGTCA
AATTTTTCCCTGATGGTCGTTCAGTCGTGGACAGCGTTGGCAACCGACGTTTCGTGACAA
AACACAGCCAAAAACGGGACGGCTACCACGTCGCAACTCTTAAATTTATTGAAGATACAA
AAATCCGGGACGAAGATATAGAAAAACTGACACGAATCGTTGATAAGGTATACGACGAGG
CAAGAGAATGGTTTTCTTCAGTAACTCCTCCTCTTAAACAGAAAATAACGCTTCATTTTG
GCGACCTACCCACTAAACAATATGGGTTTAACACCGAGAACGGGCCCGATTGGCTATGGT
GGGTTCTTGCTGTATTACCAGTAGAAGACACATACAAAGCTTCTATTGTGGGTAAAAACA
ATCTCCAAGAACGGCTACTCACTATACACAAAATATTCGTATGCTTACAAGTTAAAAGCA
AGAAAAACAGCCAGGGTTCGGCGTCTACTTCGTCGTCTAGCTAGCTTCGAGGGGATTCGA
ACCTGTTCCCACCCACTTCAAGCCACTGTCACTGTGCACAGCTTACCGCTGCTTACTCGG
CACTGCTTAGTAATTAATACATTTAAATAACATTTCATTTTTTTGAAATTTGAAGTAAAA
TAATAATGTATTGATTCTCGCTTCGTAGTACGGTATACGCCCGATGCTAATTATTGCTTC
GTGAAAAATTGGACCAAAAAAGGCGCTATGGGATAAAACACGCACAGTACACCAACTGTT
CATATAAAACCCAAACAGTGTACCGTTTTTTATACAGAAATTTTACAATTAGTGATATTT
TTGAATTATTGTACCGCTTTTACAAAAGCACCAATTTGGAGTTTGATCAGCAATATATAC
TATTATTGATGTAGCGAAATAAAACCTGTTGTTCACGCTTAAAAAA
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[83-183] 9.3E-10 - T[423-539] 7.3E-18 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[121-159] 9.509 - T[470-508] 12.534 |
| SMART |
Znf_RING (IPR001841) - T[121-158] 0.065 - T[470-507] 1.7E-4 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[136-145] . - T[485-494] . |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[184-305] 4.4E-20 |
| SMART |
TPR_repeat (IPR019734) - T[190-223] 0.0027 - T[224-257] 10.0 - T[258-291] 20.0 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[190-291] 18.12 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[190-295] 7.05E-21 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[190-223] 10.591 - T[258-291] 6.52 |
| ProSiteProfiles |
Lon_substr-bd (IPR003111) - T[555-754] 15.612 |
| SMART |
Lon_substr-bd (IPR003111) - T[557-754] 7.2E-5 |
| SUPERFAMILY |
PUA-like_sf (IPR015947) - T[559-750] 1.07E-26 |
| Pfam |
Lon_substr-bd (IPR003111) - T[563-749] 3.4E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LONF2_HUMAN | 33.026 % | 332 | 1.06E-102 |
| LONF3_HUMAN | 45.364 % | 288 | 7.04E-86 |
| LONF1_HUMAN | 31.532 % | 311 | 1.77E-94 |