Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C6.115.v2.A.SL4-1

Possible name(s)

CGREF1; CHP1; MCFD2

Gene model

KH2012:KH.C6.115

Location

KhC6 [1,257,093 / 1,258,345]

Sequences

Amino acid sequence

Length: 156

>KH.C6.115.v2.A.SL4-1
RDFLCNLVIMSSGSCLMQYVSLFAMFIAVSVCQEPLSVEMDASTEYNKAHLKEDLEGVID
KSPEDMSINELQFHYFRQHDYDKDEKLDGNEIVASILHHTEHAENPDGVTEGGRKFSDDQ
LVTIIDDVLKYQDRNNDGKLDFQEYITPYQDANPDA

Nucleotide sequence

Length: 855

>KH2012:KH.C6.115.v2.A.SL4-1
GCCGGGACTTTTTGTGCAATTTGGTAATAATGTCTTCAGGATCTTGTCTTATGCAGTATG
TTTCTCTGTTTGCAATGTTTATAGCAGTAAGTGTATGTCAAGAACCTCTCTCTGTGGAAA
TGGATGCAAGCACTGAATATAACAAAGCGCATTTGAAAGAAGATTTAGAAGGTGTTATTG
ACAAAAGTCCAGAAGACATGAGCATTAATGAGCTTCAATTTCACTACTTTCGCCAGCATG
ACTACGATAAAGATGAAAAACTTGATGGAAATGAGATAGTGGCATCAATCCTGCACCATA
CTGAACATGCTGAGAATCCCGATGGTGTCACTGAGGGGGGTCGTAAATTCTCAGACGACC
AGCTAGTGACCATTATAGACGACGTGTTAAAATATCAGGATAGAAACAATGATGGGAAAC
TAGATTTTCAAGAATATATCACTCCTTATCAAGACGCAAACCCGGATGCATAATAATCAA
TTCTCACTCTTGTTGCCTTTTTCCATTGCCTTCTTCTTTTTTGCTTTTACTTTATCCCAC
ATATTTTATGTATGTTTTAAAATAGAAAAGTAGCAATTTAAACACCCTGTTTGGTTAGAA
GAACTGCCAATTTCAAATTATTATTTAAAATTATGTACTTCCTCTGTTATGTTGCAAAAT
TATTTATATTTATTTGCTATTTTGACAACTTCCCTGCTGCAGAAATTATATAAAACCTAC
GCACTTAAAATAACTTTCGGTTAAAAATGAATGTTTGTTTAATCAGTTCAAAATGGAGTG
TAGTACTGTTTTGTGGTGTTTTACCCTGTTTATCATTACCCATTTAAGTGTTATTTTTTA
TGGTGAATAAACGCT

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[65-147] 8.86E-12
Pfam	EF_hand_dom (IPR002048) - T[72-147] 5.7E-10
ProSiteProfiles	EF_hand_dom (IPR002048) - T[76-102] 5.866 - T[120-155] 8.962
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[133-145] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MCFD2_HUMAN	36.424 %	90.5	7.64E-24