Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C6.115.v2.A.SL5-1

Possible name(s)

CGREF1; CHP1; MCFD2

Gene model

KH2012:KH.C6.115

Location

KhC6 [1,257,093 / 1,258,261]

Sequences

Amino acid sequence

Length: 128

>KH.C6.115.v2.A.SL5-1
VSVCQEPLSVEMDASTEYNKAHLKEDLEGVIDKSPEDMSINELQFHYFRQHDYDKDEKLD
GNEIVASILHHTEHAENPDGVTEGGRKFSDDQLVTIIDDVLKYQDRNNDGKLDFQEYITP
YQDANPDA

Nucleotide sequence

Length: 771

>KH2012:KH.C6.115.v2.A.SL5-1
CAGTAAGTGTATGTCAAGAACCTCTCTCTGTGGAAATGGATGCAAGCACTGAATATAACA
AAGCGCATTTGAAAGAAGATTTAGAAGGTGTTATTGACAAAAGTCCAGAAGACATGAGCA
TTAATGAGCTTCAATTTCACTACTTTCGCCAGCATGACTACGATAAAGATGAAAAACTTG
ATGGAAATGAGATAGTGGCATCAATCCTGCACCATACTGAACATGCTGAGAATCCCGATG
GTGTCACTGAGGGGGGTCGTAAATTCTCAGACGACCAGCTAGTGACCATTATAGACGACG
TGTTAAAATATCAGGATAGAAACAATGATGGGAAACTAGATTTTCAAGAATATATCACTC
CTTATCAAGACGCAAACCCGGATGCATAATAATCAATTCTCACTCTTGTTGCCTTTTTCC
ATTGCCTTCTTCTTTTTTGCTTTTACTTTATCCCACATATTTTATGTATGTTTTAAAATA
GAAAAGTAGCAATTTAAACACCCTGTTTGGTTAGAAGAACTGCCAATTTCAAATTATTAT
TTAAAATTATGTACTTCCTCTGTTATGTTGCAAAATTATTTATATTTATTTGCTATTTTG
ACAACTTCCCTGCTGCAGAAATTATATAAAACCTACGCACTTAAAATAACTTTCGGTTAA
AAATGAATGTTTGTTTAATCAGTTCAAAATGGAGTGTAGTACTGTTTTGTGGTGTTTTAC
CCTGTTTATCATTACCCATTTAAGTGTTATTTTTTATGGTGAATAAACGCT

InterProScan

SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[42-120] 1.37E-11
Pfam	EF_hand_dom (IPR002048) - T[44-119] 3.3E-10
ProSiteProfiles	EF_hand_dom (IPR002048) - T[48-74] 5.866 - T[92-127] 8.962
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[105-117] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MCFD2_HUMAN	41.525 %	88.6	1.35E-23