- Transcript 'KH2012:KH.C6.125.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.125.v1.A.nonSL10-1
Possible name(s)
KDM2A; KDM2B; PHF8
Gene model
Location
KhC6 [1,750,767 / 1,755,070]
Amino acid sequence
Length: 900
>KH.C6.125.v1.A.nonSL10-1
NTLNENMSERYLRHKSVPVYDDDDAVEDEIDGKRTYDIKEKLESSKYDGEFLIDLKGHEL
TFERIQRYGLSDPLRIKDPDGLGMVMPDRSTFSVSDVRAFVGGRRMVDVMECKTQRALEM
SMRDFERYFEGSDRKYIYNVISLEFSQSRLESLIQRPKVVDALDWIDLVWPQHLKHTQVE
QTNRIHHMKYPKVQKYCLMSVAGCYTDFHIDFGGTSVWYHILKGGKIFWLIPPTNENLQL
YERWTLSGNQGDIFFADMVSRAQRLELVAGNSLMIPSGWIHAVYTPYDSIVFGGNFLNSF
NIPMQLRIAQVEERLKVPGRFRFPFFSEVLWYALDRYLHCLTKKTFLSEEFKEENHCIVK
EKPDVEKEEEEYVHLTPFEYKGLQKLIETLEFLPEGKQSIPDGILNPLELIKTGKSLLWN
HSADDHEMSITGKSKVYWPVTIKPRDLHKLPRKPRTPSTSSTPGTKKPNASRVRRVRCKQ
CEACQRGDCRECVFCKDMRKYGGPGTMKQTCILRRCINPILPSTAREEPVTVNQPTPFVE
SPVPPKPGKRGKKRLSSNESVVVPMKSTKLEEDVEEEDDDSDFSPPSKNQMPRVVIARVS
TGDLAKYAVRPADSSTEEDLAKLPTETETLSMNRTLWMHVFKYLNHTDLCSCMLVCKDFL
RWCASPSLWKSVNLTGKQINSSTLQCLVRRTPTSINFSESNISYRQLMWLFERSPSLREL
YLIRCAWSTVAALNTAACPPLNLLDLSWAAGFTDPHLKQLLSAPTDVRPGQEICHTRLRF
CRELSVAGTDITDVGLKLISHYLPHLKSVNISFCSVTSEGFGYLTSSNSSMPKILSVIIS
QHCHLMTDCALQNASKLPKISQLDFRGCTEVTEEACEDFIENFKLNLFMPEPLYLVAQNT
Nucleotide sequence
Length: 2,916
>KH2012:KH.C6.125.v1.A.nonSL10-1
AAACACACTAAACGAAAATATGAGTGAACGTTACTTGCGGCACAAATCTGTGCCAGTGTA
CGATGACGATGACGCAGTGGAGGACGAAATAGACGGAAAACGAACTTACGATATAAAAGA
AAAATTAGAAAGTTCAAAATACGACGGGGAATTTCTTATAGACCTCAAAGGACATGAGTT
GACGTTTGAACGAATACAGCGTTATGGGTTGTCGGATCCATTGCGTATTAAAGATCCAGA
CGGTCTAGGTATGGTGATGCCAGACCGTTCCACATTTAGTGTTTCTGATGTGAGAGCATT
TGTTGGTGGACGACGTATGGTTGACGTTATGGAGTGCAAGACACAACGTGCTTTGGAAAT
GTCCATGCGCGATTTTGAACGCTATTTTGAGGGTTCTGATCGAAAATATATCTACAATGT
TATTTCTTTGGAGTTTTCTCAATCCAGATTGGAATCGTTAATTCAAAGACCAAAAGTCGT
TGATGCTCTGGACTGGATTGATTTGGTTTGGCCACAGCATTTAAAGCATACACAAGTGGA
ACAGACCAATAGGATTCACCATATGAAATACCCAAAAGTACAAAAATACTGCCTCATGTC
AGTAGCTGGGTGTTACACTGATTTTCATATTGATTTTGGCGGCACTTCGGTTTGGTACCA
TATTTTAAAAGGCGGCAAAATTTTCTGGCTTATACCACCTACGAATGAAAACTTGCAACT
TTATGAGCGCTGGACACTTTCTGGTAATCAAGGAGATATTTTCTTCGCTGATATGGTTTC
TCGTGCCCAAAGGCTAGAACTGGTTGCAGGTAACTCTCTTATGATACCTAGTGGGTGGAT
TCACGCAGTGTATACTCCTTACGATTCCATTGTTTTTGGTGGAAACTTTTTGAACTCTTT
TAATATTCCAATGCAATTGAGAATTGCACAAGTAGAAGAGAGATTAAAAGTGCCCGGACG
GTTTCGTTTCCCTTTCTTTTCAGAAGTCCTTTGGTATGCTTTGGACCGGTACCTACACTG
CCTCACTAAGAAGACGTTTTTATCTGAGGAATTTAAGGAGGAAAATCACTGCATTGTAAA
AGAGAAACCTGATGTGGAAAAAGAAGAAGAGGAATATGTTCATCTCACCCCATTCGAATA
TAAAGGTCTTCAAAAACTTATTGAAACTTTAGAGTTTTTGCCGGAAGGAAAACAATCTAT
TCCTGATGGTATTTTAAACCCCTTAGAACTAATTAAAACGGGAAAGTCTCTGTTATGGAA
CCACTCTGCTGACGACCATGAAATGTCAATCACAGGAAAATCTAAAGTTTATTGGCCAGT
TACAATAAAGCCACGAGACTTGCACAAACTTCCCAGAAAACCAAGGACACCAAGCACAAG
TTCCACGCCAGGCACTAAGAAACCAAACGCAAGTCGTGTACGAAGAGTTCGTTGCAAGCA
GTGTGAAGCATGCCAAAGAGGAGACTGCCGAGAGTGCGTGTTCTGCAAGGACATGCGAAA
ATATGGTGGCCCTGGAACCATGAAACAAACATGTATTTTAAGAAGATGCATCAACCCAAT
ACTGCCATCAACAGCCAGAGAAGAACCTGTAACAGTAAACCAGCCAACACCATTTGTTGA
GTCCCCAGTTCCTCCCAAGCCAGGAAAACGAGGCAAGAAACGGTTAAGCTCAAATGAGTC
CGTAGTTGTCCCGATGAAGTCAACAAAATTGGAGGAAGATGTAGAAGAGGAAGATGATGA
CAGCGACTTTTCTCCACCTTCTAAGAACCAAATGCCACGAGTAGTAATTGCTCGTGTTTC
AACTGGCGATTTAGCGAAGTACGCGGTTCGGCCCGCTGATTCAAGCACAGAAGAAGATTT
AGCCAAGCTGCCAACTGAAACTGAGACCCTGAGCATGAACAGGACCCTTTGGATGCATGT
GTTTAAGTATTTGAACCATACAGACTTATGTAGTTGTATGCTAGTATGTAAGGACTTTCT
ACGCTGGTGTGCTTCACCCAGTTTATGGAAGAGTGTAAATTTAACCGGTAAACAAATCAA
TTCTTCAACACTGCAATGCTTGGTACGACGAACCCCAACAAGCATAAACTTCTCCGAGTC
TAACATCAGCTACAGGCAGTTGATGTGGTTATTTGAGCGATCTCCTTCTTTAAGAGAGTT
ATACCTCATTAGGTGTGCATGGTCTACAGTTGCAGCACTGAATACAGCTGCCTGCCCCCC
TTTAAACCTCCTTGATTTATCCTGGGCAGCAGGGTTTACAGACCCCCATTTAAAACAACT
TCTTTCTGCCCCTACAGATGTACGTCCTGGCCAGGAAATCTGCCACACAAGATTAAGATT
CTGCCGAGAGCTTTCAGTTGCCGGTACAGATATAACCGACGTAGGTTTAAAGTTAATTTC
TCACTATCTACCACACCTCAAAAGCGTTAATATTAGCTTCTGCTCTGTAACCAGCGAAGG
GTTCGGTTACCTCACTTCTTCCAATTCAAGTATGCCGAAAATTCTTTCTGTTATAATTTC
CCAACACTGCCACCTAATGACTGACTGTGCGCTTCAAAATGCTTCCAAACTCCCCAAGAT
CTCACAGCTGGACTTCAGAGGCTGCACAGAAGTAACAGAAGAGGCGTGCGAAGATTTTAT
TGAGAATTTTAAACTGAATCTGTTCATGCCAGAACCTCTTTACTTAGTTGCACAAAATAC
ATAAGTAAAAATCATAATACATAAATAAAATTCATAAGAGCTTATTTGTAACCTCAAATG
CTAATTGCATGAAAGCTCCCTGTTGGGCAATATTTTAGTATTGCCTGTAAACCAGAGTTT
TTTTTACACTGCTTATTCAGTTTCATGTTGTACGAATTTCTTTATTTCTAAGTCACGTTT
TTGTTCCGTTCGAAATAAAACAGCTTTTATTTTGAT
| ProSiteProfiles |
JmjC_dom (IPR003347) - T[145-313] 28.709 |
| SMART |
JmjC_dom (IPR003347) - T[145-313] 6.1E-30 |
| Pfam |
JmjC_dom (IPR003347) - T[196-296] 3.1E-5 |
| ProSiteProfiles |
Znf_CXXC (IPR002857) - T[471-517] 12.836 |
| Pfam |
Znf_CXXC (IPR002857) - T[472-516] 3.6E-13 |
| Pfam |
F-box_dom (IPR001810) - T[621-670] 4.1E-9 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[629-888] 9.5E-36 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[738-763] 260.0 - T[803-827] 11.0 - T[857-882] 35.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KDM2A_HUMAN | 58.876 % | 449 | 2.82E-141 |
| KDM2B_HUMAN | 54.83 % | 421 | 2.5E-129 |
| PHF8_HUMAN | 45.238 % | 275 | 2.73E-78 |