- Region 'REG00000413' >
- Transcript 'KH2012:KH.C7.770.v1....' >
- Transcript 'KH2012:KH.L142.14.v1...' >
- Transcript 'KH2012:KH.C6.129.v1....' >
- Transcript 'KH2012:KH.C6.129.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.129.v1.R.nonSL3-1
Possible name(s)
NEUROG1; NEUROG2; NEUROG3
Gene model
Location
KhC6 [1,503,060 / 1,504,983]
Amino acid sequence
Length: 416
>KH.C6.129.v1.R.nonSL3-1
KFCSCYKMLDFSSNKSEQGYAIFSSVVPTSIGTSGAQKNDGGPAMHSKQGTVAYNVAAGN
AQYTDLGKTSQDVMDLFQKDTVNSNNNNNNNDKTEKPKKKRRRERSPVTINKLKKIRRSK
ANDRERNRMHGLNDALEELRHVLPTYPDETKLTKIETLRFAYNYIWCLSEMLKNGTAGNS
FDAKSAAQEMMSSVLTSSQVGTENFPTAPTAFQNFAPSNDVTATSYQQPGQYYQQYPNQQ
QYRPNRDVMQPTVTSLEIPDDLESIQAPFMSSQSDFVLEQVVTNQANQGNEIFFQNQQIP
NNNNNNNNSNNNNNNVQAVLPSISNSLLARRNISSPMTLPSNGQVQFQAPISPPFSGNSP
TCPSPMYPVAQPNFYMPPTPSDCGSMAGSSPFNSPQKQLPSPDVPYMPNYSMHLLR
Nucleotide sequence
Length: 1,473
>KH2012:KH.C6.129.v1.R.nonSL3-1
CAATCTTGATATTATAAAAATTTTGCTCTTGCTACAAAATGTTGGATTTTTCTTCAAATA
AGTCGGAACAAGGTTACGCCATATTTTCTTCTGTTGTTCCGACAAGCATTGGGACATCGG
GCGCACAAAAAAACGACGGCGGGCCCGCCATGCATTCGAAGCAGGGGACGGTCGCTTATA
ACGTCGCAGCCGGGAATGCACAATATACTGATTTAGGAAAGACCTCACAAGACGTAATGG
ATCTCTTCCAAAAAGACACAGTCAACAGTAACAACAACAACAACAATAACGACAAAACAG
AAAAGCCAAAAAAGAAGCGCAGACGCGAAAGAAGTCCAGTGACAATTAACAAGTTAAAAA
AGATTCGACGATCAAAAGCTAATGACAGAGAACGAAACCGAATGCATGGTCTTAATGACG
CACTAGAAGAATTAAGACATGTTTTGCCGACCTACCCCGACGAGACCAAATTAACAAAAA
TCGAAACCTTGCGATTCGCATACAATTATATTTGGTGTTTGAGTGAAATGTTAAAAAATG
GAACAGCGGGAAATAGTTTTGATGCAAAATCCGCCGCTCAAGAAATGATGTCATCAGTTC
TGACGTCATCTCAAGTAGGCACCGAAAACTTCCCAACCGCGCCCACGGCATTTCAAAACT
TCGCCCCCTCCAATGACGTCACAGCTACGTCATACCAGCAGCCTGGGCAATACTACCAGC
AATACCCAAACCAGCAACAATATCGACCAAATCGTGACGTCATGCAGCCTACTGTGACGT
CACTGGAAATCCCCGACGACCTAGAAAGCATCCAAGCTCCTTTTATGTCGTCACAATCTG
ACTTTGTTCTGGAGCAAGTGGTCACAAACCAAGCTAACCAAGGAAACGAGATTTTCTTTC
AAAATCAACAGATACCAAACAACAATAATAACAACAACAACAGCAACAACAACAACAACA
ATGTTCAAGCAGTTTTGCCGTCGATTTCGAACTCGTTGTTGGCTAGAAGAAACATCTCGT
CTCCAATGACGTTACCCAGCAATGGACAAGTCCAATTTCAGGCCCCCATTTCACCTCCAT
TTTCTGGGAATTCCCCGACGTGCCCCAGCCCCATGTACCCAGTTGCACAGCCCAACTTTT
ACATGCCGCCGACCCCAAGCGATTGTGGAAGTATGGCGGGATCGTCGCCCTTCAATAGCC
CGCAGAAGCAACTTCCTTCTCCCGATGTACCATACATGCCAAACTACTCCATGCATTTAC
TCCGATAAGGAAAATCTATAAACATTCCCTATTATGGCTTCAAAACGCCAAAATTCATTC
TATTTCATTTGTACGCTCTTTTAGGCGAAATTTTCATTTTCCTTACTGCCTTTTATTACC
ATTATAAATTGTCCGCCAAACGTATCGTGCCAACTTTCTTTTGAATGTTTATTTCTTACA
CCTGTGTTCTTAAATAGAACTTCCCACAAACCT
| PANTHER |
Ngn1 (IPR032653) - T[8-365] 1.2E-97 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[115-179] 2.22E-17 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[116-168] 16.526 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[116-175] 2.5E-22 |
| CDD |
bHLH_dom (IPR011598) - T[117-173] 3.08293E-17 |
| Pfam |
bHLH_dom (IPR011598) - T[117-165] 4.3E-15 |
| SMART |
bHLH_dom (IPR011598) - T[122-174] 1.7E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NGN3_HUMAN | 60.526 % | 104 | 3.51E-26 |
| NGN1_HUMAN | 64.384 % | 105 | 2.98E-26 |
| NGN2_HUMAN | 55.814 % | 104 | 1.44E-25 |