- Transcript 'Boleac.CG.SB_v3.S849...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Molecular Tool 'Dmrt>BMP2/4' >
- Transcript 'KH2012:KH.C6.198.v3....'
Transcript Model
Transcript Id
KH2012:KH.C6.198.v3.A.SL2-2
Possible name(s)
ADGRB2; HMCN1; THBS1
Gene model
Location
KhC6 [1,145,300 / 1,148,257]
>KH.C6.198.v3.A.SL2-2
QPVPAYDTSLRLSMFSNGNENTPFSPKGYLHHGNAMLVVGGCATAVIPCGTSKTNRDQCS
RFMCCWIPSRRLPSGQACFTSVYNFIKFPFAKWDNWGEWTTCTASACGTGTQTRTRTCID
GQVGQNGCEGSETDTQACQGSCTISWGAWAQWSTCQSAEPTCTSGTRSRSRVCVNQAGVT
QANTACTTGAASESETCNAQLCPAYTQWAGSCSVTCGGGIQNRARTCTTTPTGPIPSSCT
TIAGQACNTQSCNKDLDIMFIVDSSQQLDSCSAKEASLGQVAPFTPAGGLLTTANFPNFV
QQKTFLTSFFSIYKTVVAGRTNVGVLSRSGSCAAATSTNYHKIKALSDTYVPLQVKNFFL
FTHVIHLQNQVQFVWATNNYLA
>KH2012:KH.C6.198.v3.A.SL2-2
GTCAACCAGTGCCTGCCTACGACACCAGTTTAAGACTTAGCATGTTTTCGAATGGTAACG
AAAACACACCGTTCTCACCAAAGGGATATTTACACCACGGCAATGCAATGTTGGTGGTTG
GAGGATGCGCAACTGCAGTCATTCCATGCGGGACATCGAAAACGAACAGAGACCAGTGTA
GCAGATTCATGTGTTGTTGGATTCCAAGCAGGAGGCTACCATCAGGACAAGCTTGCTTTA
CCTCCGTTTACAACTTTATCAAGTTTCCATTTGCAAAGTGGGATAACTGGGGTGAATGGA
CTACATGCACTGCTTCAGCTTGTGGAACTGGAACACAAACCAGAACAAGGACTTGTATTG
ATGGACAAGTTGGACAAAATGGCTGTGAAGGAAGTGAAACTGATACACAAGCATGCCAAG
GTTCTTGTACAATATCATGGGGAGCGTGGGCTCAGTGGTCTACATGCCAAAGTGCTGAGC
CAACTTGCACATCGGGCACAAGGTCCAGATCTCGTGTATGTGTCAACCAAGCTGGTGTCA
CTCAAGCAAATACAGCGTGCACAACAGGTGCTGCATCAGAGAGCGAAACATGCAATGCCC
AATTATGTCCTGCTTATACTCAATGGGCTGGATCTTGCAGTGTAACCTGTGGAGGTGGGA
TCCAAAACCGTGCCCGAACTTGCACAACGACGCCTACAGGACCCATTCCATCATCATGTA
CTACTATTGCTGGACAAGCATGCAACACCCAGAGCTGCAACAAAGACTTAGACATCATGT
TCATTGTGGACTCTTCACAGCAACTTGACTCGTGCTCAGCAAAAGAGGCATCACTTGGAC
AAGTTGCGCCATTTACACCTGCAGGAGGACTTCTAACAACAGCCAATTTCCCCAACTTTG
TTCAACAAAAAACTTTTCTTACTTCGTTTTTCAGCATCTACAAGACTGTAGTTGCTGGCC
GAACTAACGTTGGGGTGTTGTCACGCTCAGGAAGCTGTGCAGCAGCTACTTCTACAAACT
ACCACAAAATTAAAGCACTGAGTGACACATATGTGCCGCTACAGGTTAAAAACTTTTTTC
TCTTTACACATGTGATCCACTTGCAAAATCAAGTCCAATTTGTTTGGGCCACTAACAATT
ACCTTGCTTAAAACTTTTATACACAATTAAAATATTTTATTTAGTTGACTCCTACAGTAC
CATCAATAAATCACCAACAATAACTTGACAAAAAATTTTAAATCTGAATTTCAAATAATT
TTCTATTCCAGGCTGAAGCAGCTATTTCTTACCTCTGTGGGTTCCCAGATTTTTTCTCAA
CCCTTGGTTGTGGTATTGAATACATCAAAACTGGCAACACT
ProSiteProfiles |
TSP1_rpt (IPR000884) - T[90-139] 9.973 - T[143-203] 11.078 - T[204-253] 8.22 |
Gene3D |
TSP1_rpt_sf (IPR036383) - T[91-142] 8.1E-9 - T[143-202] 6.8E-7 - T[204-256] 1.0E-7 |
SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[92-138] 8.24E-9 - T[145-202] 1.57E-6 - T[210-252] 1.7E-5 |
SMART |
TSP1_rpt (IPR000884) - T[93-143] 1.0E-6 - T[146-203] 2.0E-4 - T[205-253] 0.0062 |
Pfam |
TSP1_rpt (IPR000884) - T[95-140] 1.5E-6 - T[148-202] 3.6E-5 - T[210-252] 1.3E-6 |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
HMCN1_HUMAN | 36.872 % | 91.7 | 8.25E-20 |
AGRB2_HUMAN | 34.32 % | 86.7 | 3.04E-18 |
TSP1_HUMAN | 36.207 % | 85.1 | 8.55E-18 |