Login
Help

Submit your Data

  1. Transcript 'KH2012:KH.C6.20.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C6.20.v1.A.ND1-1

Possible name(s)

LSM10; SNRPD1; SNRPD3

Location

KhC6 [1,079,025 / 1,080,822]

Sequences

Amino acid sequence

Length: 141

>KH.C6.20.v1.A.ND1-1
RSSKYFVVSFNSFSIFLSNSKVIMKLARFLMKLSHETVTIELKNGTQVHGTITGVDICMN
THLKSVKMTVKNRDPVNLDTLSIRGNNIRYYILPDSLPLDTLLVDEGPKQPKGGFRDRGR
GKGLFQYSGFQELFTPAFPQT

Nucleotide sequence

Length: 1,153

>KH2012:KH.C6.20.v1.A.ND1-1
TCGAATATTAAGAAATTTAAGTTACCCGAAAATCGTTGGTCATCACTGCTAAGCACGAAC
ACCAAGCGCGGCATTTTCACGTCGATCGTACAAGTAACGTTCGTCAAAATATTTTGTCGT
GAGTTTTAACTCATTTTCAATCTTTCTAAGCAATTCAAAGGTTATCATGAAGCTTGCAAG
ATTTTTGATGAAACTTAGTCACGAAACTGTGACAATTGAATTGAAAAATGGAACACAAGT
GCATGGAACTATTACTGGTGTTGACATCTGCATGAACACACATTTAAAATCGGTGAAAAT
GACAGTAAAGAACCGAGATCCCGTAAACCTGGACACTTTGAGTATTCGTGGCAACAATAT
CCGTTATTACATCCTCCCAGACAGTCTTCCCCTTGATACACTGCTAGTGGATGAAGGACC
AAAGCAACCTAAAGGAGGATTTAGAGATCGTGGAAGGGGTAAGGGTTTATTTCAGTATTC
TGGTTTTCAAGAACTGTTTACCCCAGCGTTTCCCCAAACTTAAAAAAGCCTAAACATTTG
CCTCGACCCTTTACAATTATTTTCCCTATAATGCTTTGTGAATTCACGATAGAGACATCC
TAGTTACAATCAATAATGTGCTTTGCGGTACCTCCTTTGAAACAGCAACCGTACCCTAGT
TGATCCGTGGACACCAGCACGCCTTTATCTCATAGGTTAGGGGTTCGAGGCTTAGCAGTA
ACTTTCTGCAAGCCATGTGAGTATTTTGGCAAGATACTTAACAACAACAGTTGCTTGAAT
CAATTGCTCCTTCATGGTTGTCTAAATTATCAGCCATACATTGCAAAAAATGATTTAACA
TTCTCACCTTTTAGGTCGTGGTCGAGGACGTGGGCGTGGTCGTGGAGTTCGTGGGCGTGG
CAGAGGCGGACCACCACGTCGATTTTAAACCAGAAAAATCATTCACTCATCTCTATCTTA
CGTATATTACACTTGAAGTAGAATGGATAATTTCATTCAATCTTTAGGTTTACGTTTATG
GAGATGGACTTATTTGGATATTTGAAAATCGTGACTTTTATTGAATAAAACACCTGCTGC
CGAGTTTTATAATTGAAGACGTTCGTTTTAGTGTAGTTTTTGTTGTGTCAAATTAAATGT
AACGTAAAAGCAA

InterProScan

PANTHER
LSm4/Sm_D1/D3 (IPR027141) - T[24-122] 1.1E-47
CDD
Sm_D1 (IPR034102) - T[25-110] 2.37494E-63
Pfam
LSM_dom_euk/arc (IPR001163) - T[28-92] 2.4E-18
SUPERFAMILY
LSM_dom_sf (IPR010920) - T[28-124] 5.93E-24
SMART
LSM_dom_euk/arc (IPR001163) - T[28-93] 1.9E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMD1_HUMAN 87.209 % 158 3.23E-51





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.