- Transcript 'KH2012:KH.L170.28.v2...' >
- EST 'FF792181.1' >
- Transcript 'KH2012:KH.C3.199.v2....' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C6.200.v1....'
Transcript Model
Transcript Id
KH2012:KH.C6.200.v1.A.ND1-1
Possible name(s)
EIF5A; EIF5A2; EIF5AL1
Gene model
Location
KhC6 [1,253,382 / 1,256,217]
Amino acid sequence
Length: 153
>KH.C6.200.v1.A.ND1-1
SRRKMSNDSGASMTYPMQCSALRKNGHVMIKGHAVKIVDMSTSKTGKHGHAKVHMVGIDI
FDSKKYEDISPSTHNMQVPNIKRTEVQVVDVDVADQQVTIMEEDGDTRELKVEEKPMLDS
IHKIIESGSDCYITILAALGREKVITAKEKNDD
Nucleotide sequence
Length: 1,183
>KH2012:KH.C6.200.v1.A.ND1-1
GGCTGACCGCCCCTTGGCGACAGCATGGTGTTTTAGGTTACAGCAATGTGGTGAAATAGG
AAAATAAAGTCGAAGAAAAATGTCAAATGACTCCGGTGCATCCATGACTTACCCTATGCA
ATGCTCTGCATTACGTAAAAATGGTCACGTTATGATCAAGGGTCATGCCGTTAAAATCGT
GGACATGTCTACTTCAAAAACTGGAAAGCACGGCCACGCAAAGGTCCATATGGTTGGGAT
TGATATTTTTGACAGCAAAAAGTACGAGGACATCAGTCCTTCTACTCATAATATGCAGGT
TCCAAATATAAAAAGAACTGAAGTCCAGGTTGTCGACGTGGACGTTGCTGATCAGCAGGT
TACTATTATGGAGGAAGATGGCGACACAAGGGAGCTGAAGGTTGAAGAAAAACCTATGCT
GGACAGCATTCATAAGATCATAGAGTCTGGGTCAGATTGTTATATAACAATTTTGGCAGC
GTTGGGACGTGAAAAGGTGATTACAGCAAAGGAAAAGAATGATGATTAAACAACCAACCA
ACACTACTGTTCTCAATTGGGCATTTTCAAATTATTACCCAAAACCTGGACTTCCTAGAA
AAGTTCGAATGTAAAAATCTGCAAAAGAATTAAATAATTTTCAAATGTACATACCAACTT
ACCACAATGGTCCTCAGTTCTTTTTTTAATCTCTCACAAAAGCCTCGTTTTCGCTCTGTT
GTAGCCGCATGTAAAACGGTTTAACCCCGAGGTCCCCGAATGTAAATGATAGGACTCGTA
TGTTAATGTGACCCCTTGTCCCCTGGTCAGTGCCAACTGAAAATTTTATTGATACAAAAG
TTCAGTTACTTGTCAGCGGATACCAATTAATTTAATTCCCTTGGGGTGCTTTTAACCCGG
CCCTATTGCTTATTTGTGGACACCTAGAAGACTTTAATTTCACTTGAAACAGTTTTATTT
GTGTACGTGCATGTACAATATTGGTTTTGGCGTAAGAAAATTTGCCGGTGTTAGCAATCG
TGTGAAGTGTAATGCAACAGAATGTTAGTTAAGATTGTTGTACTTGTGAGTCTGTTTTGA
ACCTATATATAGTTCTATTTCAGGAGGGGTCTATAAACTTGAGTGTAATCTGCTGCATCC
CCCACGTGGCTAGAAAATGTTAGAATACAGGTGTTTTATACAC
| PIRSF |
IF5A-like (IPR001884) - T[1-152] 1.3E-54 |
| Gene3D |
Rib_L2_dom2 (IPR014722) - T[2-76] 2.4E-40 |
| PANTHER |
IF5A-like (IPR001884) - T[7-151] 6.2E-59 |
| SUPERFAMILY |
Translation_prot_SH3-like_sf (IPR008991) - T[10-88] 2.66E-25 |
| TIGRFAM |
IF5A-like (IPR001884) - T[12-147] 8.3E-42 |
| ProSitePatterns |
Trans_elong_IF5A_hypusine_site (IPR019769) - T[45-52] . |
| SMART |
Transl_elong_IF5A_C (IPR020189) - T[80-148] 4.9E-15 |
| Pfam |
Transl_elong_IF5A_C (IPR020189) - T[80-148] 4.0E-13 |
| SUPERFAMILY |
NA-bd_OB-fold (IPR012340) - T[81-149] 1.14E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF5A1_HUMAN | 52.778 % | 159 | 8.98E-51 |
| IF5AL_HUMAN | 51.389 % | 154 | 5.77E-49 |
| IF5A2_HUMAN | 53.472 % | 157 | 3.56E-50 |